RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 MAP3K19Q56UN5 1328 aa25.36■■□□□ 1.65
CIRBP-245ENST00000621399 CAMTA1Q9Y6Y1 1673 aa25.36■■□□□ 1.65
CIRBP-245ENST00000621399 NWD2Q9ULI1 1742 aa25.35■■□□□ 1.65
CIRBP-245ENST00000621399 AMPHP49418 695 aa25.35■■□□□ 1.65
CIRBP-245ENST00000621399 DDX10Q13206 875 aaKnown RBP25.35■■□□□ 1.65
CIRBP-245ENST00000621399 CC2D1BQ5T0F9 858 aaKnown RBP25.35■■□□□ 1.65
CIRBP-245ENST00000621399 RBM6P78332 1123 aaKnown RBP25.34■■□□□ 1.65
CIRBP-245ENST00000621399 CNGB1Q14028 1251 aaPredicted RBP25.34■■□□□ 1.65
CIRBP-245ENST00000621399 GJD4Q96KN9 370 aaPredicted RBP25.33■■□□□ 1.65
CIRBP-245ENST00000621399 LMO7Q8WWI1 1683 aa25.32■■□□□ 1.64
CIRBP-245ENST00000621399 IP6K1Q92551 441 aa25.32■■□□□ 1.64
CIRBP-245ENST00000621399 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.31■■□□□ 1.64
CIRBP-245ENST00000621399 COL5A2P05997 1499 aaPredicted RBP25.3■■□□□ 1.64
CIRBP-245ENST00000621399 LARP1Q6PKG0 1096 aaKnown RBP25.3■■□□□ 1.64
CIRBP-245ENST00000621399 NPC1L1Q9UHC9 1359 aa25.3■■□□□ 1.64
CIRBP-245ENST00000621399 COL18A1P39060 1754 aa25.29■■□□□ 1.64
CIRBP-245ENST00000621399 PPM1GO15355 546 aaPredicted RBP25.29■■□□□ 1.64
CIRBP-245ENST00000621399 CSB-PGBD3P0DP91 1061 aa25.29■■□□□ 1.64
CIRBP-245ENST00000621399 HOXC9P31274 260 aa25.29■■□□□ 1.64
CIRBP-245ENST00000621399 NRAPQ86VF7 1730 aa25.29■■□□□ 1.64
CIRBP-245ENST00000621399 ABCC6O95255 1503 aa25.28■■□□□ 1.64
CIRBP-245ENST00000621399 EMILIN1Q9Y6C2 1016 aa25.28■■□□□ 1.64
CIRBP-245ENST00000621399 SPATA31A5Q5VU36 1347 aa25.28■■□□□ 1.64
CIRBP-245ENST00000621399 SPATA31A7Q8IWB4 1347 aa25.28■■□□□ 1.64
CIRBP-245ENST00000621399 ANKRD26Q9UPS8 1709 aa25.28■■□□□ 1.64
CIRBP-245ENST00000621399 LTN1O94822 1766 aa25.27■■□□□ 1.64
CIRBP-245ENST00000621399 POLKQ9UBT6 870 aa25.27■■□□□ 1.64
CIRBP-245ENST00000621399 RTL1A6NKG5 1358 aa25.27■■□□□ 1.64
CIRBP-245ENST00000621399 TOM1L2Q6ZVM7 507 aa25.26■■□□□ 1.63
CIRBP-245ENST00000621399 ANKRD24Q8TF21 1146 aa25.26■■□□□ 1.63
CIRBP-245ENST00000621399 USP35Q9P2H5 1018 aa25.26■■□□□ 1.63
CIRBP-245ENST00000621399 WDR17Q8IZU2 1322 aa25.26■■□□□ 1.63
CIRBP-245ENST00000621399 BLMP54132 1417 aaPredicted RBP25.26■■□□□ 1.63
CIRBP-245ENST00000621399 LTV1Q96GA3 475 aaPredicted RBP25.25■■□□□ 1.63
CIRBP-245ENST00000621399 SPATA31A1Q5TZJ5 1347 aa25.25■■□□□ 1.63
CIRBP-245ENST00000621399 KIF24Q5T7B8 1368 aa25.25■■□□□ 1.63
CIRBP-245ENST00000621399 FLT4P35916 1363 aa25.24■■□□□ 1.63
CIRBP-245ENST00000621399 ERBB3P21860 1342 aa25.24■■□□□ 1.63
CIRBP-245ENST00000621399 CRB1P82279 1406 aa25.23■■□□□ 1.63
CIRBP-245ENST00000621399 HSP90AB2PQ58FF8 381 aa25.23■■□□□ 1.63
CIRBP-245ENST00000621399 NLRP2Q9NX02 1062 aa25.21■■□□□ 1.63
CIRBP-245ENST00000621399 GLI3P10071 1580 aa25.21■■□□□ 1.63
CIRBP-245ENST00000621399 FAM98CQ17RN3 349 aaKnown RBP25.2■■□□□ 1.62
CIRBP-245ENST00000621399 TCP11L2Q8N4U5 519 aa25.2■■□□□ 1.62
CIRBP-245ENST00000621399 INSRP06213 1382 aa25.19■■□□□ 1.62
CIRBP-245ENST00000621399 CARD10Q9BWT7 1032 aa25.19■■□□□ 1.62
CIRBP-245ENST00000621399 RGPD5Q99666 1765 aa25.18■■□□□ 1.62
CIRBP-245ENST00000621399 A0A0G2JS52 829 aa25.18■■□□□ 1.62
CIRBP-245ENST00000621399 MYT1Q01538 1121 aa25.18■■□□□ 1.62
CIRBP-245ENST00000621399 THRAP3Q9Y2W1 955 aaKnown RBP25.18■■□□□ 1.62
CIRBP-245ENST00000621399 PEAK1Q9H792 1746 aa25.17■■□□□ 1.62
CIRBP-245ENST00000621399 CDK12Q9NYV4 1490 aaPredicted RBP25.17■■□□□ 1.62
CIRBP-245ENST00000621399 ONECUT3O60422 494 aaPredicted RBP25.17■■□□□ 1.62
CIRBP-245ENST00000621399 RGS12O14924 1447 aa25.16■■□□□ 1.62
CIRBP-245ENST00000621399 BARGINQ6ZT62 677 aa25.16■■□□□ 1.62
CIRBP-245ENST00000621399 SMG6Q86US8 1419 aaKnown RBP25.16■■□□□ 1.62
CIRBP-245ENST00000621399 SEPT12Q8IYM1 358 aa25.16■■□□□ 1.62
CIRBP-245ENST00000621399 MTHFSP49914 203 aa25.15■■□□□ 1.62
CIRBP-245ENST00000621399 MAP2P11137 1827 aaKnown RBP25.14■■□□□ 1.62
CIRBP-245ENST00000621399 NBPF6Q5VWK0 638 aa25.11■■□□□ 1.61
CIRBP-245ENST00000621399 NBPF4Q96M43 638 aa25.11■■□□□ 1.61
CIRBP-245ENST00000621399 PPP2R1AP30153 589 aa25.1■■□□□ 1.61
CIRBP-245ENST00000621399 EIF4A2Q14240 407 aaKnown RBP25.1■■□□□ 1.61
CIRBP-245ENST00000621399 CDCA7Q9BWT1 371 aaPredicted RBP25.09■■□□□ 1.61
CIRBP-245ENST00000621399 PARD3Q8TEW0 1356 aa25.08■■□□□ 1.61
CIRBP-245ENST00000621399 RALBP1Q15311 655 aa25.08■■□□□ 1.61
CIRBP-245ENST00000621399 USHBP1Q8N6Y0 703 aa25.07■■□□□ 1.6
CIRBP-245ENST00000621399 IL2RBP14784 551 aa25.05■■□□□ 1.6
CIRBP-245ENST00000621399 FAM208AQ9UK61 1670 aaKnown RBP25.04■■□□□ 1.6
CIRBP-245ENST00000621399 KRT27Q7Z3Y8 459 aa25.04■■□□□ 1.6
CIRBP-245ENST00000621399 EYA1Q99502 592 aa25.04■■□□□ 1.6
CIRBP-245ENST00000621399 PDE3BQ13370 1112 aa25.03■■□□□ 1.6
CIRBP-245ENST00000621399 CFAP53Q96M91 514 aa25.03■■□□□ 1.6
CIRBP-245ENST00000621399 THSD7AQ9UPZ6 1657 aa25.03■■□□□ 1.6
CIRBP-245ENST00000621399 DIAPH1O60610 1272 aaKnown RBP25.02■■□□□ 1.6
CIRBP-245ENST00000621399 IL13P35225 146 aa25.02■■□□□ 1.6
CIRBP-245ENST00000621399 DDB1Q16531 1140 aa25.02■■□□□ 1.6
CIRBP-245ENST00000621399 DISP2A7MBM2 1401 aa25.02■■□□□ 1.6
CIRBP-245ENST00000621399 EXOC5O00471 708 aa25■■□□□ 1.59
CIRBP-245ENST00000621399 RAPGEF4Q8WZA2 1011 aa25■■□□□ 1.59
CIRBP-245ENST00000621399 PRKRIP1Q9H875 184 aaPredicted RBP24.99■■□□□ 1.59
CIRBP-245ENST00000621399 IGSF1Q8N6C5 1336 aa24.98■■□□□ 1.59
CIRBP-245ENST00000621399 RGPD2P0DJD1 1756 aa24.98■■□□□ 1.59
CIRBP-245ENST00000621399 TATP17735 454 aaPredicted RBP24.97■■□□□ 1.59
CIRBP-245ENST00000621399 MYBBP1AQ9BQG0 1328 aaKnown RBP24.96■■□□□ 1.59
CIRBP-245ENST00000621399 FAM182BQ5T319 152 aa24.96■■□□□ 1.59
CIRBP-245ENST00000621399 PARP4Q9UKK3 1724 aaKnown RBP24.95■■□□□ 1.58
CIRBP-245ENST00000621399 NCAPD2Q15021 1401 aa24.95■■□□□ 1.58
CIRBP-245ENST00000621399 SULT6B1Q6IMI4 303 aa24.94■■□□□ 1.58
CIRBP-245ENST00000621399 UPF1Q92900 1129 aaKnown RBP eCLIP24.94■■□□□ 1.58
CIRBP-245ENST00000621399 MEGF6O75095 1541 aa24.94■■□□□ 1.58
CIRBP-245ENST00000621399 COL3A1P02461 1466 aaPredicted RBP24.94■■□□□ 1.58
CIRBP-245ENST00000621399 BRWD3Q6RI45 1802 aa24.93■■□□□ 1.58
CIRBP-245ENST00000621399 U2SURPO15042 1029 aaKnown RBP24.93■■□□□ 1.58
CIRBP-245ENST00000621399 WNK3Q9BYP7 1800 aa24.93■■□□□ 1.58
CIRBP-245ENST00000621399 ANP32CO43423 234 aa24.92■■□□□ 1.58
CIRBP-245ENST00000621399 AEBP1Q8IUX7 1158 aa24.92■■□□□ 1.58
CIRBP-245ENST00000621399 ZCRB1Q8TBF4 217 aaKnown RBP24.92■■□□□ 1.58
CIRBP-245ENST00000621399 NUDCQ9Y266 331 aa24.92■■□□□ 1.58
CIRBP-245ENST00000621399 LRRC37A3O60309 1634 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms