RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 PDIA6Q15084 440 aa9.47□□□□□ -0.89
BRCC3-209ENST00000620502 TMEM132EQ6IEE7 984 aa9.47□□□□□ -0.89
BRCC3-209ENST00000620502 STAC3Q96MF2 364 aa9.47□□□□□ -0.89
BRCC3-209ENST00000620502 C19orf44Q9H6X5 657 aa9.47□□□□□ -0.89
BRCC3-209ENST00000620502 MSH6P52701 1360 aa9.47□□□□□ -0.89
BRCC3-209ENST00000620502 PTCH1Q13635 1447 aa9.47□□□□□ -0.89
BRCC3-209ENST00000620502 NALCNQ8IZF0 1738 aa9.46□□□□□ -0.89
BRCC3-209ENST00000620502 LRPPRCP42704 1394 aaKnown RBP9.46□□□□□ -0.9
BRCC3-209ENST00000620502 KNDC1Q76NI1 1749 aa9.45□□□□□ -0.9
BRCC3-209ENST00000620502 SPDYE16A6NNV3 312 aaPredicted RBP9.45□□□□□ -0.9
BRCC3-209ENST00000620502 PCGF6Q9BYE7 350 aa9.45□□□□□ -0.9
BRCC3-209ENST00000620502 SLAIN2Q9P270 581 aa9.45□□□□□ -0.9
BRCC3-209ENST00000620502 STK26Q9P289 416 aa9.45□□□□□ -0.9
BRCC3-209ENST00000620502 ABCC11Q96J66 1382 aa9.45□□□□□ -0.9
BRCC3-209ENST00000620502 TECPR2O15040 1411 aa9.45□□□□□ -0.9
BRCC3-209ENST00000620502 FAM135BQ49AJ0 1406 aa9.45□□□□□ -0.9
BRCC3-209ENST00000620502 YTHDC2Q9H6S0 1430 aaKnown RBP9.45□□□□□ -0.9
BRCC3-209ENST00000620502 ADGRB1O14514 1584 aa9.45□□□□□ -0.9
BRCC3-209ENST00000620502 PSDA5PKW4 1024 aaPredicted RBP9.44□□□□□ -0.9
BRCC3-209ENST00000620502 HSPA1LP34931 641 aa9.44□□□□□ -0.9
BRCC3-209ENST00000620502 NEUROD1Q13562 356 aa9.44□□□□□ -0.9
BRCC3-209ENST00000620502 C14orf37Q86TY3 774 aa9.44□□□□□ -0.9
BRCC3-209ENST00000620502 L3MBTL2Q969R5 705 aa9.44□□□□□ -0.9
BRCC3-209ENST00000620502 ROBO1Q9Y6N7 1651 aa9.43□□□□□ -0.9
BRCC3-209ENST00000620502 DCCP43146 1447 aa9.43□□□□□ -0.9
BRCC3-209ENST00000620502 ADGRL3Q9HAR2 1447 aa9.43□□□□□ -0.9
BRCC3-209ENST00000620502 PTGER2P43116 358 aa9.43□□□□□ -0.9
BRCC3-209ENST00000620502 WAPLQ7Z5K2 1190 aa9.43□□□□□ -0.9
BRCC3-209ENST00000620502 SIRT1Q96EB6 747 aa9.43□□□□□ -0.9
BRCC3-209ENST00000620502 KIAA1210Q9ULL0 1709 aa9.42□□□□□ -0.9
BRCC3-209ENST00000620502 PLEKHH1Q9ULM0 1364 aa9.42□□□□□ -0.9
BRCC3-209ENST00000620502 ATF3P18847 181 aa9.42□□□□□ -0.9
BRCC3-209ENST00000620502 FOSBP53539 338 aa9.42□□□□□ -0.9
BRCC3-209ENST00000620502 CDAN1Q8IWY9 1227 aa9.42□□□□□ -0.9
BRCC3-209ENST00000620502 ZNF687Q8N1G0 1237 aa9.42□□□□□ -0.9
BRCC3-209ENST00000620502 MST1RQ04912 1400 aa9.41□□□□□ -0.9
BRCC3-209ENST00000620502 DLC1Q96QB1 1528 aa9.41□□□□□ -0.9
BRCC3-209ENST00000620502 SLC24A1O60721 1099 aa9.39□□□□□ -0.91
BRCC3-209ENST00000620502 NBPF1Q3BBV0 1214 aa9.39□□□□□ -0.91
BRCC3-209ENST00000620502 PPP4R3BQ5MIZ7 849 aa9.39□□□□□ -0.91
BRCC3-209ENST00000620502 ZNF454Q8N9F8 522 aa9.39□□□□□ -0.91
BRCC3-209ENST00000620502 TRAK1Q9UPV9 953 aa9.39□□□□□ -0.91
BRCC3-209ENST00000620502 PCDHGA10Q9Y5H3 936 aa9.39□□□□□ -0.91
BRCC3-209ENST00000620502 CDC42BPGQ6DT37 1551 aa9.38□□□□□ -0.91
BRCC3-209ENST00000620502 BRINP3Q76B58 766 aa9.38□□□□□ -0.91
BRCC3-209ENST00000620502 PRAM1Q96QH2 718 aa9.38□□□□□ -0.91
BRCC3-209ENST00000620502 PHLPP1O60346 1717 aa9.38□□□□□ -0.91
BRCC3-209ENST00000620502 ARHGEF28Q8N1W1 1705 aaKnown RBP9.38□□□□□ -0.91
BRCC3-209ENST00000620502 C1orf167Q5SNV9 1468 aa9.38□□□□□ -0.91
BRCC3-209ENST00000620502 TRPM1Q7Z4N2 1603 aa9.38□□□□□ -0.91
BRCC3-209ENST00000620502 PHF14O94880 888 aa9.37□□□□□ -0.91
BRCC3-209ENST00000620502 NBPF8Q3BBV2 869 aa9.37□□□□□ -0.91
BRCC3-209ENST00000620502 POTEEQ6S8J3 1075 aa9.37□□□□□ -0.91
BRCC3-209ENST00000620502 DDX12PQ92771 950 aa9.37□□□□□ -0.91
BRCC3-209ENST00000620502 FMN2Q9NZ56 1722 aa9.36□□□□□ -0.91
BRCC3-209ENST00000620502 COL16A1Q07092 1604 aaPredicted RBP9.36□□□□□ -0.91
BRCC3-209ENST00000620502 NHSL1Q5SYE7 1610 aa9.36□□□□□ -0.91
BRCC3-209ENST00000620502 AHDC1Q5TGY3 1603 aaPredicted RBP9.36□□□□□ -0.91
BRCC3-209ENST00000620502 SAFB2Q14151 953 aaKnown RBP eCLIP9.36□□□□□ -0.915e-6■□□□□ 11
BRCC3-209ENST00000620502 ORAI2Q96SN7 254 aa9.36□□□□□ -0.91
BRCC3-209ENST00000620502 KRTAP3-3Q9BYR6 98 aa9.36□□□□□ -0.91
BRCC3-209ENST00000620502 KRTAP3-2Q9BYR7 98 aa9.36□□□□□ -0.91
BRCC3-209ENST00000620502 POGKQ9P215 609 aa9.36□□□□□ -0.91
BRCC3-209ENST00000620502 RGPD8O14715 1765 aaPredicted RBP9.35□□□□□ -0.91
BRCC3-209ENST00000620502 ADGRB2O60241 1585 aa9.35□□□□□ -0.91
BRCC3-209ENST00000620502 ZDHHC16Q969W1 377 aa9.35□□□□□ -0.91
BRCC3-209ENST00000620502 TONSLQ96HA7 1378 aa9.35□□□□□ -0.91
BRCC3-209ENST00000620502 PBX2P40425 430 aa9.34□□□□□ -0.91
BRCC3-209ENST00000620502 DDX17Q92841 729 aaKnown RBP9.34□□□□□ -0.91
BRCC3-209ENST00000620502 EPAS1Q99814 870 aa9.34□□□□□ -0.91
BRCC3-209ENST00000620502 USP32Q8NFA0 1604 aa9.34□□□□□ -0.91
BRCC3-209ENST00000620502 CLSPNQ9HAW4 1339 aa9.33□□□□□ -0.92
BRCC3-209ENST00000620502 NUTM2FA1L443 756 aa9.33□□□□□ -0.92
BRCC3-209ENST00000620502 TYW1BQ6NUM6 668 aa9.33□□□□□ -0.92
BRCC3-209ENST00000620502 HIRIP3Q9BW71 556 aaPredicted RBP9.33□□□□□ -0.92
BRCC3-209ENST00000620502 ADAM33Q9BZ11 813 aa9.33□□□□□ -0.92
BRCC3-209ENST00000620502 BCL2L12Q9HB09 334 aa9.33□□□□□ -0.92
BRCC3-209ENST00000620502 MINK1Q8N4C8 1332 aaPredicted RBP9.32□□□□□ -0.92
BRCC3-209ENST00000620502 SEMA3EO15041 775 aa9.32□□□□□ -0.92
BRCC3-209ENST00000620502 MLLT3P42568 568 aaPredicted RBP9.32□□□□□ -0.92
BRCC3-209ENST00000620502 ESCO1Q5FWF5 840 aa9.32□□□□□ -0.92
BRCC3-209ENST00000620502 FBXW7Q969H0 707 aa9.32□□□□□ -0.92
BRCC3-209ENST00000620502 GRXCR2A6NFK2 248 aa9.31□□□□□ -0.92
BRCC3-209ENST00000620502 WASLO00401 505 aaPredicted RBP9.31□□□□□ -0.92
BRCC3-209ENST00000620502 ARHGAP33O14559 1287 aa9.31□□□□□ -0.92
BRCC3-209ENST00000620502 OSBPP22059 807 aa9.31□□□□□ -0.92
BRCC3-209ENST00000620502 NBR1Q14596 966 aa9.31□□□□□ -0.92
BRCC3-209ENST00000620502 AXIN2Q9Y2T1 843 aa9.31□□□□□ -0.92
BRCC3-209ENST00000620502 ROCK2O75116 1388 aaKnown RBP9.31□□□□□ -0.92
BRCC3-209ENST00000620502 GPRASP1Q5JY77 1395 aa9.31□□□□□ -0.92
BRCC3-209ENST00000620502 MED1Q15648 1581 aaPredicted RBP9.31□□□□□ -0.92
BRCC3-209ENST00000620502 SOS2Q07890 1332 aaPredicted RBP9.31□□□□□ -0.92
BRCC3-209ENST00000620502 SHPRHQ149N8 1683 aa9.3□□□□□ -0.92
BRCC3-209ENST00000620502 QRICH2Q9H0J4 1663 aa9.3□□□□□ -0.92
BRCC3-209ENST00000620502 RALGAPBQ86X10 1494 aa9.3□□□□□ -0.92
BRCC3-209ENST00000620502 JCADQ9P266 1359 aa9.3□□□□□ -0.92
BRCC3-209ENST00000620502 PRIM1P49642 420 aaKnown RBP9.3□□□□□ -0.92
BRCC3-209ENST00000620502 TIMELESSQ9UNS1 1208 aa9.3□□□□□ -0.92
BRCC3-209ENST00000620502 ANKARQ7Z5J8 1434 aa9.3□□□□□ -0.92
BRCC3-209ENST00000620502 PRR36Q9H6K5 1346 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 643.7 ms