RNA–Protein interactions for RNA: ENST00000619178.1

SNORD3D-201, Transcript of small nucleolar RNA, C/D box 3D, humanhuman

BASIC

Gene SNORD3D, Length 218 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3D-201ENST00000619178 ARHGEF25Q86VW2 580 aa14.74□□□□□ -0.05
SNORD3D-201ENST00000619178 PRDM11Q9NQV5 511 aa14.74□□□□□ -0.05
SNORD3D-201ENST00000619178 RGPD1P0DJD0 1748 aa14.73□□□□□ -0.05
SNORD3D-201ENST00000619178 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.73□□□□□ -0.05
SNORD3D-201ENST00000619178 ZBTB7CA1YPR0 619 aa14.73□□□□□ -0.05
SNORD3D-201ENST00000619178 PLEKHG5O94827 1062 aa14.73□□□□□ -0.05
SNORD3D-201ENST00000619178 IP6K1Q92551 441 aa14.73□□□□□ -0.05
SNORD3D-201ENST00000619178 EMILIN1Q9Y6C2 1016 aa14.73□□□□□ -0.05
SNORD3D-201ENST00000619178 NEFMP07197 916 aa14.72□□□□□ -0.05
SNORD3D-201ENST00000619178 HOXC9P31274 260 aa14.72□□□□□ -0.05
SNORD3D-201ENST00000619178 HSPA1LP34931 641 aa14.72□□□□□ -0.05
SNORD3D-201ENST00000619178 ZC3H6P61129 1189 aaKnown RBP14.72□□□□□ -0.05
SNORD3D-201ENST00000619178 CABLES1Q8TDN4 633 aa14.72□□□□□ -0.05
SNORD3D-201ENST00000619178 KIAA0232Q92628 1395 aa14.72□□□□□ -0.05
SNORD3D-201ENST00000619178 COL3A1P02461 1466 aaPredicted RBP14.71□□□□□ -0.05
SNORD3D-201ENST00000619178 CAMTA1Q9Y6Y1 1673 aa14.71□□□□□ -0.06
SNORD3D-201ENST00000619178 VIRMAQ69YN4 1812 aaKnown RBP14.71□□□□□ -0.06
SNORD3D-201ENST00000619178 NRAPQ86VF7 1730 aa14.7□□□□□ -0.06
SNORD3D-201ENST00000619178 PARP4Q9UKK3 1724 aaKnown RBP14.7□□□□□ -0.06
SNORD3D-201ENST00000619178 WNK3Q9BYP7 1800 aa14.69□□□□□ -0.06
SNORD3D-201ENST00000619178 DLG5Q8TDM6 1919 aa14.68□□□□□ -0.06
SNORD3D-201ENST00000619178 NUTM2BA6NNL0 878 aaPredicted RBP14.68□□□□□ -0.06
SNORD3D-201ENST00000619178 NUTM2EB1AL46 878 aaPredicted RBP14.68□□□□□ -0.06
SNORD3D-201ENST00000619178 NUTM2AQ8IVF1 878 aaPredicted RBP14.68□□□□□ -0.06
SNORD3D-201ENST00000619178 U2SURPO15042 1029 aaKnown RBP14.67□□□□□ -0.06
SNORD3D-201ENST00000619178 FBLN1P23142 703 aa14.67□□□□□ -0.06
SNORD3D-201ENST00000619178 MEX3CQ5U5Q3 659 aaKnown RBP14.67□□□□□ -0.06
SNORD3D-201ENST00000619178 PNISRQ8TF01 805 aaKnown RBP14.67□□□□□ -0.06
SNORD3D-201ENST00000619178 U2AF1L5P0DN76 240 aaPredicted RBP14.66□□□□□ -0.06
SNORD3D-201ENST00000619178 EVA1CP58658 441 aa14.66□□□□□ -0.06
SNORD3D-201ENST00000619178 U2AF1Q01081 240 aaKnown RBP eCLIP14.66□□□□□ -0.06
SNORD3D-201ENST00000619178 HSP90AB2PQ58FF8 381 aa14.66□□□□□ -0.06
SNORD3D-201ENST00000619178 FAM9BQ8IZU0 186 aa14.66□□□□□ -0.06
SNORD3D-201ENST00000619178 CSB-PGBD3P0DP91 1061 aa14.65□□□□□ -0.06
SNORD3D-201ENST00000619178 EIF4A2Q14240 407 aaKnown RBP14.65□□□□□ -0.06
SNORD3D-201ENST00000619178 ERBB3P21860 1342 aa14.65□□□□□ -0.06
SNORD3D-201ENST00000619178 COL5A2P05997 1499 aaPredicted RBP14.64□□□□□ -0.07
SNORD3D-201ENST00000619178 ADAMTS2O95450 1211 aa14.64□□□□□ -0.07
SNORD3D-201ENST00000619178 IL13P35225 146 aa14.64□□□□□ -0.07
SNORD3D-201ENST00000619178 ANKRD24Q8TF21 1146 aa14.64□□□□□ -0.07
SNORD3D-201ENST00000619178 PLEKHG2Q9H7P9 1386 aa14.63□□□□□ -0.07
SNORD3D-201ENST00000619178 FCHSD2O94868 740 aa14.63□□□□□ -0.07
SNORD3D-201ENST00000619178 CHRNA2Q15822 529 aa14.63□□□□□ -0.07
SNORD3D-201ENST00000619178 CCDC184Q52MB2 194 aa14.63□□□□□ -0.07
SNORD3D-201ENST00000619178 LTV1Q96GA3 475 aaPredicted RBP14.63□□□□□ -0.07
SNORD3D-201ENST00000619178 WDR17Q8IZU2 1322 aa14.63□□□□□ -0.07
SNORD3D-201ENST00000619178 MAPK8IP3Q9UPT6 1336 aa14.63□□□□□ -0.07
SNORD3D-201ENST00000619178 FAM83GA6ND36 823 aa14.62□□□□□ -0.07
SNORD3D-201ENST00000619178 NGEFQ8N5V2 710 aa14.62□□□□□ -0.07
SNORD3D-201ENST00000619178 NGLY1Q96IV0 654 aa14.62□□□□□ -0.07
SNORD3D-201ENST00000619178 BTG4Q9NY30 223 aa14.62□□□□□ -0.07
SNORD3D-201ENST00000619178 IGSF1Q8N6C5 1336 aa14.62□□□□□ -0.07
SNORD3D-201ENST00000619178 CRB1P82279 1406 aa14.61□□□□□ -0.07
SNORD3D-201ENST00000619178 SLIT2O94813 1529 aa14.61□□□□□ -0.07
SNORD3D-201ENST00000619178 PKD1L3Q7Z443 1732 aa14.61□□□□□ -0.07
SNORD3D-201ENST00000619178 TOM1L2Q6ZVM7 507 aa14.6□□□□□ -0.07
SNORD3D-201ENST00000619178 NLRP2Q9NX02 1062 aa14.6□□□□□ -0.07
SNORD3D-201ENST00000619178 ADAMTS8Q9UP79 889 aa14.6□□□□□ -0.07
SNORD3D-201ENST00000619178 KDRP35968 1356 aa14.6□□□□□ -0.07
SNORD3D-201ENST00000619178 LRP6O75581 1613 aa14.59□□□□□ -0.07
SNORD3D-201ENST00000619178 RUNDC1Q96C34 613 aa14.59□□□□□ -0.07
SNORD3D-201ENST00000619178 C8orf37Q96NL8 207 aa14.59□□□□□ -0.07
SNORD3D-201ENST00000619178 STRN4Q9NRL3 753 aa14.59□□□□□ -0.07
SNORD3D-201ENST00000619178 AXIN2Q9Y2T1 843 aa14.59□□□□□ -0.07
SNORD3D-201ENST00000619178 NCAPD2Q15021 1401 aa14.58□□□□□ -0.07
SNORD3D-201ENST00000619178 SULT6B1Q6IMI4 303 aa14.58□□□□□ -0.08
SNORD3D-201ENST00000619178 RAPGEF4Q8WZA2 1011 aa14.58□□□□□ -0.08
SNORD3D-201ENST00000619178 EYA1Q99502 592 aa14.58□□□□□ -0.08
SNORD3D-201ENST00000619178 CARD10Q9BWT7 1032 aa14.57□□□□□ -0.08
SNORD3D-201ENST00000619178 KAT6BQ8WYB5 2073 aa14.57□□□□□ -0.08
SNORD3D-201ENST00000619178 HMOX1P09601 288 aa14.56□□□□□ -0.08
SNORD3D-201ENST00000619178 UNC5CLQ8IV45 518 aa14.56□□□□□ -0.08
SNORD3D-201ENST00000619178 FNBP4Q8N3X1 1017 aaPredicted RBP14.56□□□□□ -0.08
SNORD3D-201ENST00000619178 CDCA7Q9BWT1 371 aaPredicted RBP14.56□□□□□ -0.08
SNORD3D-201ENST00000619178 THRAP3Q9Y2W1 955 aaKnown RBP14.56□□□□□ -0.08
SNORD3D-201ENST00000619178 SCN11AQ9UI33 1791 aa14.55□□□□□ -0.08
SNORD3D-201ENST00000619178 TATP17735 454 aaPredicted RBP14.55□□□□□ -0.08
SNORD3D-201ENST00000619178 PRKAR2BP31323 418 aa14.55□□□□□ -0.08
SNORD3D-201ENST00000619178 AMOTQ4VCS5 1084 aa14.55□□□□□ -0.08
SNORD3D-201ENST00000619178 NCBP3Q53F19 620 aaKnown RBP14.55□□□□□ -0.08
SNORD3D-201ENST00000619178 NBPF6Q5VWK0 638 aa14.55□□□□□ -0.08
SNORD3D-201ENST00000619178 NBPF4Q96M43 638 aa14.55□□□□□ -0.08
SNORD3D-201ENST00000619178 RSPH6AQ9H0K4 717 aa14.55□□□□□ -0.08
SNORD3D-201ENST00000619178 USP21Q9UK80 565 aa14.55□□□□□ -0.08
SNORD3D-201ENST00000619178 LMOD3Q0VAK6 560 aa14.54□□□□□ -0.08
SNORD3D-201ENST00000619178 CCDC9Q9Y3X0 531 aaKnown RBP14.54□□□□□ -0.08
SNORD3D-201ENST00000619178 PLEKHO1Q53GL0 409 aaPredicted RBP14.53□□□□□ -0.08
SNORD3D-201ENST00000619178 ZNF772Q68DY9 489 aaPredicted RBP14.53□□□□□ -0.08
SNORD3D-201ENST00000619178 GAS2L2Q8NHY3 880 aa14.53□□□□□ -0.08
SNORD3D-201ENST00000619178 SPG7Q9UQ90 795 aa14.53□□□□□ -0.08
SNORD3D-201ENST00000619178 SHANK3Q9BYB0 1731 aa14.52□□□□□ -0.08
SNORD3D-201ENST00000619178 AFF2P51816 1311 aa14.52□□□□□ -0.08
SNORD3D-201ENST00000619178 IL2RBP14784 551 aa14.52□□□□□ -0.09
SNORD3D-201ENST00000619178 HNRNPUQ00839 825 aaKnown RBP eCLIP14.52□□□□□ -0.09
SNORD3D-201ENST00000619178 VPS72Q15906 364 aa14.52□□□□□ -0.09
SNORD3D-201ENST00000619178 LARP1Q6PKG0 1096 aaKnown RBP14.52□□□□□ -0.09
SNORD3D-201ENST00000619178 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.52□□□□□ -0.09
SNORD3D-201ENST00000619178 TRPC5Q9UL62 973 aaPredicted RBP14.52□□□□□ -0.09
SNORD3D-201ENST00000619178 BCL9LQ86UU0 1499 aa14.51□□□□□ -0.09
SNORD3D-201ENST00000619178 CCDC146Q8IYE0 955 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms