RNA–Protein interactions for RNA: ENST00000616684.4

CDH23-212, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 4,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-212ENST00000616684 KIF6Q6ZMV9 814 aa22.3■■□□□ 1.16
CDH23-212ENST00000616684 LETM1O95202 739 aaPredicted RBP22.3■■□□□ 1.16
CDH23-212ENST00000616684 SART3Q15020 963 aaKnown RBP22.3■■□□□ 1.16
CDH23-212ENST00000616684 MAP4K4O95819 1239 aaPredicted RBP22.3■■□□□ 1.16
CDH23-212ENST00000616684 CABP4P57796 275 aa22.3■■□□□ 1.16
CDH23-212ENST00000616684 CCDC70Q6NSX1 233 aa22.3■■□□□ 1.16
CDH23-212ENST00000616684 SKAP1Q86WV1 359 aa22.3■■□□□ 1.16
CDH23-212ENST00000616684 GRIN2AQ12879 1464 aa22.29■■□□□ 1.16
CDH23-212ENST00000616684 GPS2Q13227 327 aa22.29■■□□□ 1.16
CDH23-212ENST00000616684 XBP1P17861 261 aa22.29■■□□□ 1.16
CDH23-212ENST00000616684 TRIM5Q9C035 493 aa22.29■■□□□ 1.16
CDH23-212ENST00000616684 KDM4AO75164 1064 aa22.29■■□□□ 1.16
CDH23-212ENST00000616684 MYL6BP14649 208 aa22.29■■□□□ 1.16
CDH23-212ENST00000616684 TSPY26PQ9H489 355 aa22.28■■□□□ 1.16
CDH23-212ENST00000616684 ANKLE2Q86XL3 938 aa22.28■■□□□ 1.16
CDH23-212ENST00000616684 ATP2B1P20020 1258 aa22.28■■□□□ 1.16
CDH23-212ENST00000616684 CCDC158Q5M9N0 1113 aa22.28■■□□□ 1.16
CDH23-212ENST00000616684 DCTN1Q14203 1278 aa22.27■■□□□ 1.16
CDH23-212ENST00000616684 MCM10Q7L590 875 aa22.27■■□□□ 1.16
CDH23-212ENST00000616684 R3HCC1Q9Y3T6 440 aaKnown RBP22.27■■□□□ 1.16
CDH23-212ENST00000616684 BRMS1Q9HCU9 246 aa22.27■■□□□ 1.16
CDH23-212ENST00000616684 MIS18AQ9NYP9 233 aa22.27■■□□□ 1.16
CDH23-212ENST00000616684 SPG7Q9UQ90 795 aa22.27■■□□□ 1.16
CDH23-212ENST00000616684 WDR33Q9C0J8 1336 aaKnown RBP22.27■■□□□ 1.16
CDH23-212ENST00000616684 OLFM4Q6UX06 510 aa22.27■■□□□ 1.16
CDH23-212ENST00000616684 EXOC6BQ9Y2D4 811 aa22.27■■□□□ 1.16
CDH23-212ENST00000616684 CNNM1Q9NRU3 951 aa22.27■■□□□ 1.15
CDH23-212ENST00000616684 MCM4P33991 863 aa22.26■■□□□ 1.15
CDH23-212ENST00000616684 TOM1L2Q6ZVM7 507 aa22.26■■□□□ 1.15
CDH23-212ENST00000616684 VSIG10Q8N0Z9 540 aa22.26■■□□□ 1.15
CDH23-212ENST00000616684 CIZ1Q9ULV3 898 aaPredicted RBP22.26■■□□□ 1.15
CDH23-212ENST00000616684 DDX54Q8TDD1 881 aaKnown RBP22.26■■□□□ 1.15
CDH23-212ENST00000616684 AACSQ86V21 672 aa22.26■■□□□ 1.15
CDH23-212ENST00000616684 ABCC11Q96J66 1382 aa22.26■■□□□ 1.15
CDH23-212ENST00000616684 BTBD11A6QL63 1104 aa22.26■■□□□ 1.15
CDH23-212ENST00000616684 DUSP27Q5VZP5 1158 aa22.26■■□□□ 1.15
CDH23-212ENST00000616684 TCEAL9Q9UHQ7 104 aa22.26■■□□□ 1.15
CDH23-212ENST00000616684 NKTRP30414 1462 aaKnown RBP22.25■■□□□ 1.15
CDH23-212ENST00000616684 CD109Q6YHK3 1445 aa22.25■■□□□ 1.15
CDH23-212ENST00000616684 KIF14Q15058 1648 aa22.24■■□□□ 1.15
CDH23-212ENST00000616684 GNAT3A8MTJ3 354 aa22.24■■□□□ 1.15
CDH23-212ENST00000616684 CEBPZQ03701 1054 aaKnown RBP22.24■■□□□ 1.15
CDH23-212ENST00000616684 NME9Q86XW9 330 aa22.24■■□□□ 1.15
CDH23-212ENST00000616684 ANKRD1Q15327 319 aa22.24■■□□□ 1.15
CDH23-212ENST00000616684 MTMR7Q9Y216 660 aa22.24■■□□□ 1.15
CDH23-212ENST00000616684 STK3Q13188 491 aa22.24■■□□□ 1.15
CDH23-212ENST00000616684 IDI1Q13907 227 aa22.24■■□□□ 1.15
CDH23-212ENST00000616684 ALDH1L2Q3SY69 923 aa22.24■■□□□ 1.15
CDH23-212ENST00000616684 TTC39AQ5SRH9 613 aa22.24■■□□□ 1.15
CDH23-212ENST00000616684 FMNL2Q96PY5 1086 aa22.24■■□□□ 1.15
CDH23-212ENST00000616684 RRP12Q5JTH9 1297 aaKnown RBP22.23■■□□□ 1.15
CDH23-212ENST00000616684 STK38Q15208 465 aa22.23■■□□□ 1.15
CDH23-212ENST00000616684 CTDP1Q9Y5B0 961 aaPredicted RBP22.23■■□□□ 1.15
CDH23-212ENST00000616684 MEX3CQ5U5Q3 659 aaKnown RBP22.23■■□□□ 1.15
CDH23-212ENST00000616684 XPCQ01831 940 aaPredicted RBP22.22■■□□□ 1.15
CDH23-212ENST00000616684 AEBP1Q8IUX7 1158 aa22.22■■□□□ 1.15
CDH23-212ENST00000616684 EMILIN1Q9Y6C2 1016 aa22.22■■□□□ 1.15
CDH23-212ENST00000616684 ADGRL1O94910 1474 aa22.22■■□□□ 1.15
CDH23-212ENST00000616684 BLOC1S2Q6QNY1 142 aa22.22■■□□□ 1.15
CDH23-212ENST00000616684 CWC27Q6UX04 472 aaKnown RBP22.22■■□□□ 1.15
CDH23-212ENST00000616684 MNS1Q8NEH6 495 aa22.22■■□□□ 1.15
CDH23-212ENST00000616684 ZNF396Q96N95 335 aaPredicted RBP22.22■■□□□ 1.15
CDH23-212ENST00000616684 CCDC173Q0VFZ6 552 aa22.22■■□□□ 1.15
CDH23-212ENST00000616684 PRDM11Q9NQV5 511 aa22.22■■□□□ 1.15
CDH23-212ENST00000616684 LARP1BQ659C4 914 aaKnown RBP22.21■■□□□ 1.15
CDH23-212ENST00000616684 ZC3H6P61129 1189 aaKnown RBP22.2■■□□□ 1.14
CDH23-212ENST00000616684 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.2■■□□□ 1.14
CDH23-212ENST00000616684 KRT85P78386 507 aa22.2■■□□□ 1.14
CDH23-212ENST00000616684 LRPPRCP42704 1394 aaKnown RBP22.2■■□□□ 1.14
CDH23-212ENST00000616684 PDILTQ8N807 584 aa22.2■■□□□ 1.14
CDH23-212ENST00000616684 CCDC57Q2TAC2 916 aa22.19■■□□□ 1.14
CDH23-212ENST00000616684 IL27Q8NEV9 243 aa22.19■■□□□ 1.14
CDH23-212ENST00000616684 JAKMIP1Q96N16 626 aaKnown RBP22.19■■□□□ 1.14
CDH23-212ENST00000616684 GRPEL1Q9HAV7 217 aa22.19■■□□□ 1.14
CDH23-212ENST00000616684 SCAF11Q99590 1463 aaKnown RBP22.19■■□□□ 1.14
CDH23-212ENST00000616684 URB2Q14146 1524 aaKnown RBP22.18■■□□□ 1.14
CDH23-212ENST00000616684 ANO8Q9HCE9 1232 aaPredicted RBP22.18■■□□□ 1.14
CDH23-212ENST00000616684 ZNF771Q7L3S4 317 aaPredicted RBP22.18■■□□□ 1.14
CDH23-212ENST00000616684 CEP126Q9P2H0 1117 aa22.18■■□□□ 1.14
CDH23-212ENST00000616684 NUTM1Q86Y26 1132 aa22.18■■□□□ 1.14
CDH23-212ENST00000616684 FBXO31Q5XUX0 539 aaPredicted RBP22.17■■□□□ 1.14
CDH23-212ENST00000616684 DISP3Q9P2K9 1392 aa22.17■■□□□ 1.14
CDH23-212ENST00000616684 SAMD1Q6SPF0 538 aaPredicted RBP22.17■■□□□ 1.14
CDH23-212ENST00000616684 CCDC192P0DO97 292 aa22.17■■□□□ 1.14
CDH23-212ENST00000616684 KCNH5Q8NCM2 988 aa22.17■■□□□ 1.14
CDH23-212ENST00000616684 PDRG1Q9NUG6 133 aa22.17■■□□□ 1.14
CDH23-212ENST00000616684 FKBP4Q02790 459 aaKnown RBP eCLIP22.16■■□□□ 1.14
CDH23-212ENST00000616684 POGZQ7Z3K3 1410 aa22.16■■□□□ 1.14
CDH23-212ENST00000616684 SMC2O95347 1197 aa22.16■■□□□ 1.14
CDH23-212ENST00000616684 TRIM27P14373 513 aa22.16■■□□□ 1.14
CDH23-212ENST00000616684 BCL11BQ9C0K0 894 aaPredicted RBP22.16■■□□□ 1.14
CDH23-212ENST00000616684 SMARCA5O60264 1052 aaPredicted RBP22.16■■□□□ 1.14
CDH23-212ENST00000616684 KIF1BPQ96EK5 621 aa22.16■■□□□ 1.14
CDH23-212ENST00000616684 PEG3Q9GZU2 1588 aa22.16■■□□□ 1.14
CDH23-212ENST00000616684 JMYQ8N9B5 988 aa22.15■■□□□ 1.14
CDH23-212ENST00000616684 MX1P20591 662 aa22.15■■□□□ 1.14
CDH23-212ENST00000616684 ARGLU1Q9NWB6 273 aaPredicted RBP22.15■■□□□ 1.14
CDH23-212ENST00000616684 WASLO00401 505 aaPredicted RBP22.15■■□□□ 1.14
CDH23-212ENST00000616684 ME1P48163 572 aa22.15■■□□□ 1.14
CDH23-212ENST00000616684 ZSCAN31Q96LW9 406 aaPredicted RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms