RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 RRS1Q15050 365 aaKnown RBP18.36■□□□□ 0.53
TNXB-209ENST00000613214 FAM43AQ8N2R8 423 aa18.36■□□□□ 0.53
TNXB-209ENST00000613214 NUCB2P80303 420 aa18.36■□□□□ 0.53
TNXB-209ENST00000613214 CCDC57Q2TAC2 916 aa18.35■□□□□ 0.53
TNXB-209ENST00000613214 RSPH4AQ5TD94 716 aa18.35■□□□□ 0.53
TNXB-209ENST00000613214 NFKBIBQ15653 356 aa18.35■□□□□ 0.53
TNXB-209ENST00000613214 CCDC181Q5TID7 509 aa18.35■□□□□ 0.53
TNXB-209ENST00000613214 HDGFL1Q5TGJ6 251 aa18.35■□□□□ 0.53
TNXB-209ENST00000613214 RSPH6AQ9H0K4 717 aa18.35■□□□□ 0.53
TNXB-209ENST00000613214 ADAMTS8Q9UP79 889 aa18.35■□□□□ 0.53
TNXB-209ENST00000613214 WASHC2AQ641Q2 1341 aa18.34■□□□□ 0.53
TNXB-209ENST00000613214 MYO6Q9UM54 1294 aa18.34■□□□□ 0.53
TNXB-209ENST00000613214 MAPK8IP2Q13387 824 aaPredicted RBP18.34■□□□□ 0.53
TNXB-209ENST00000613214 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.34■□□□□ 0.53
TNXB-209ENST00000613214 TMX1Q9H3N1 280 aa18.34■□□□□ 0.53
TNXB-209ENST00000613214 LRP2BPQ9P2M1 347 aa18.34■□□□□ 0.53
TNXB-209ENST00000613214 CT47B1P0C2W7 299 aaPredicted RBP18.33■□□□□ 0.53
TNXB-209ENST00000613214 SLC26A8Q96RN1 970 aa18.33■□□□□ 0.53
TNXB-209ENST00000613214 PTCD1O75127 700 aaKnown RBP18.33■□□□□ 0.52
TNXB-209ENST00000613214 IDH1O75874 414 aaKnown RBP18.33■□□□□ 0.52
TNXB-209ENST00000613214 TWISTNBQ3B726 338 aaPredicted RBP18.33■□□□□ 0.52
TNXB-209ENST00000613214 CWC27Q6UX04 472 aaKnown RBP18.33■□□□□ 0.52
TNXB-209ENST00000613214 AACSQ86V21 672 aa18.33■□□□□ 0.52
TNXB-209ENST00000613214 SMG6Q86US8 1419 aaKnown RBP18.33■□□□□ 0.52
TNXB-209ENST00000613214 DNA2P51530 1060 aa18.32■□□□□ 0.52
TNXB-209ENST00000613214 ZNF530Q6P9A1 599 aaPredicted RBP18.32■□□□□ 0.52
TNXB-209ENST00000613214 TMEM87AQ8NBN3 555 aa18.32■□□□□ 0.52
TNXB-209ENST00000613214 DCTN1Q14203 1278 aa18.32■□□□□ 0.52
TNXB-209ENST00000613214 UBA5Q9GZZ9 404 aa18.32■□□□□ 0.52
TNXB-209ENST00000613214 IL1RAPL2Q9NP60 686 aa18.32■□□□□ 0.52
TNXB-209ENST00000613214 TNNT1P13805 278 aa18.32■□□□□ 0.52
TNXB-209ENST00000613214 CCDC82Q8N4S0 544 aa18.31■□□□□ 0.52
TNXB-209ENST00000613214 DDX11Q96FC9 970 aa18.31■□□□□ 0.52
TNXB-209ENST00000613214 TSPY26PQ9H489 355 aa18.31■□□□□ 0.52
TNXB-209ENST00000613214 CFAP70Q5T0N1 1121 aa18.31■□□□□ 0.52
TNXB-209ENST00000613214 LRRFIP2Q9Y608 721 aaKnown RBP18.31■□□□□ 0.52
TNXB-209ENST00000613214 GNAI2P04899 355 aa18.3■□□□□ 0.52
TNXB-209ENST00000613214 ZNHIT6Q9NWK9 470 aaKnown RBP18.3■□□□□ 0.52
TNXB-209ENST00000613214 BTBD11A6QL63 1104 aa18.3■□□□□ 0.52
TNXB-209ENST00000613214 MINDY4BA8MYZ0 360 aa18.3■□□□□ 0.52
TNXB-209ENST00000613214 PPFIBP1Q86W92 1011 aa18.29■□□□□ 0.52
TNXB-209ENST00000613214 USHBP1Q8N6Y0 703 aa18.29■□□□□ 0.52
TNXB-209ENST00000613214 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.29■□□□□ 0.52
TNXB-209ENST00000613214 ERC1Q8IUD2 1116 aa18.29■□□□□ 0.52
TNXB-209ENST00000613214 ANKIB1Q9P2G1 1089 aa18.29■□□□□ 0.52
TNXB-209ENST00000613214 RAPGEF2Q9Y4G8 1499 aa18.29■□□□□ 0.52
TNXB-209ENST00000613214 TCP11L2Q8N4U5 519 aa18.29■□□□□ 0.52
TNXB-209ENST00000613214 ZNF396Q96N95 335 aaPredicted RBP18.29■□□□□ 0.52
TNXB-209ENST00000613214 CDK19Q9BWU1 502 aa18.29■□□□□ 0.52
TNXB-209ENST00000613214 MIA2Q96PC5 1412 aa18.28■□□□□ 0.52
TNXB-209ENST00000613214 GAS2L2Q8NHY3 880 aa18.28■□□□□ 0.52
TNXB-209ENST00000613214 NACAP1Q9BZK3 213 aa18.28■□□□□ 0.52
TNXB-209ENST00000613214 PRDM11Q9NQV5 511 aa18.28■□□□□ 0.52
TNXB-209ENST00000613214 PDZRN3Q9UPQ7 1066 aa18.28■□□□□ 0.52
TNXB-209ENST00000613214 TRIM22Q8IYM9 498 aa18.28■□□□□ 0.52
TNXB-209ENST00000613214 CCDC39Q9UFE4 941 aa18.28■□□□□ 0.52
TNXB-209ENST00000613214 NUTM1Q86Y26 1132 aa18.28■□□□□ 0.52
TNXB-209ENST00000613214 ZBED9Q6R2W3 1325 aa18.27■□□□□ 0.52
TNXB-209ENST00000613214 CRACR2BQ8N4Y2 399 aaPredicted RBP18.27■□□□□ 0.52
TNXB-209ENST00000613214 ERLIN2O94905 339 aa18.27■□□□□ 0.52
TNXB-209ENST00000613214 PODXL2Q9NZ53 605 aa18.27■□□□□ 0.52
TNXB-209ENST00000613214 WIZO95785 1651 aa18.27■□□□□ 0.51
TNXB-209ENST00000613214 UBAC1Q9BSL1 405 aa18.26■□□□□ 0.51
TNXB-209ENST00000613214 TNMDQ9H2S6 317 aa18.26■□□□□ 0.51
TNXB-209ENST00000613214 CABP1Q9NZU7 370 aa18.26■□□□□ 0.51
TNXB-209ENST00000613214 CAMK4Q16566 473 aa18.26■□□□□ 0.51
TNXB-209ENST00000613214 ZRSR2Q15696 482 aaKnown RBP18.26■□□□□ 0.51
TNXB-209ENST00000613214 POLR3DP05423 398 aaPredicted RBP18.26■□□□□ 0.51
TNXB-209ENST00000613214 AFAP1Q8N556 730 aa18.25■□□□□ 0.51
TNXB-209ENST00000613214 GNAI3P08754 354 aa18.25■□□□□ 0.51
TNXB-209ENST00000613214 CCDC113Q9H0I3 377 aa18.25■□□□□ 0.51
TNXB-209ENST00000613214 CYP46A1Q9Y6A2 500 aa18.25■□□□□ 0.51
TNXB-209ENST00000613214 GOLGA6L10A6NI86 522 aa18.25■□□□□ 0.51
TNXB-209ENST00000613214 TRAK2O60296 914 aa18.25■□□□□ 0.51
TNXB-209ENST00000613214 GUCY1B3Q02153 619 aa18.24■□□□□ 0.51
TNXB-209ENST00000613214 STIM1Q13586 685 aa18.24■□□□□ 0.51
TNXB-209ENST00000613214 LARP6Q9BRS8 491 aaKnown RBP18.24■□□□□ 0.51
TNXB-209ENST00000613214 SPG7Q9UQ90 795 aa18.24■□□□□ 0.51
TNXB-209ENST00000613214 PPFIA3O75145 1194 aa18.24■□□□□ 0.51
TNXB-209ENST00000613214 CNTLNQ9NXG0 1405 aa18.23■□□□□ 0.51
TNXB-209ENST00000613214 LRRCC1Q9C099 1032 aa18.23■□□□□ 0.51
TNXB-209ENST00000613214 JAKMIP1Q96N16 626 aaKnown RBP18.23■□□□□ 0.51
TNXB-209ENST00000613214 MROH2BQ7Z745 1585 aa18.23■□□□□ 0.51
TNXB-209ENST00000613214 MPRIPQ6WCQ1 1025 aa18.23■□□□□ 0.51
TNXB-209ENST00000613214 ERCC4Q92889 916 aaPredicted RBP18.23■□□□□ 0.51
TNXB-209ENST00000613214 SLC12A5Q9H2X9 1139 aa18.23■□□□□ 0.51
TNXB-209ENST00000613214 GBP2P32456 591 aaPredicted RBP18.22■□□□□ 0.51
TNXB-209ENST00000613214 CCDC96Q2M329 555 aa18.22■□□□□ 0.51
TNXB-209ENST00000613214 SRGAP3O43295 1099 aa18.22■□□□□ 0.51
TNXB-209ENST00000613214 KLHL10Q6JEL2 608 aa18.22■□□□□ 0.51
TNXB-209ENST00000613214 MACROD2A1Z1Q3 448 aa18.21■□□□□ 0.51
TNXB-209ENST00000613214 ZPR1O75312 459 aa18.21■□□□□ 0.51
TNXB-209ENST00000613214 IGHMBP2P38935 993 aaKnown RBP18.21■□□□□ 0.51
TNXB-209ENST00000613214 LARP1BQ659C4 914 aaKnown RBP18.21■□□□□ 0.51
TNXB-209ENST00000613214 METTL24Q5JXM2 366 aa18.21■□□□□ 0.51
TNXB-209ENST00000613214 KIAA1328Q86T90 577 aa18.21■□□□□ 0.51
TNXB-209ENST00000613214 ANAPC15P60006 121 aa18.2■□□□□ 0.5
TNXB-209ENST00000613214 CTNNBL1Q8WYA6 563 aaPredicted RBP18.2■□□□□ 0.5
TNXB-209ENST00000613214 SMARCA5O60264 1052 aaPredicted RBP18.2■□□□□ 0.5
TNXB-209ENST00000613214 CCDC144CPQ8IYA2 1237 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms