RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 AKAP12Q02952 1782 aa21.03■□□□□ 0.96
CNOT3-208ENST00000613073 RLBP1P12271 317 aa21.02■□□□□ 0.96
CNOT3-208ENST00000613073 RRAGDQ9NQL2 400 aaPredicted RBP21.02■□□□□ 0.95
CNOT3-208ENST00000613073 AATKQ6ZMQ8 1374 aa21.01■□□□□ 0.95
CNOT3-208ENST00000613073 PLEKHG3A1L390 1219 aa21.01■□□□□ 0.95
CNOT3-208ENST00000613073 RGS3P49796 1198 aa21.01■□□□□ 0.95
CNOT3-208ENST00000613073 THUMPD2Q9BTF0 503 aaKnown RBP21■□□□□ 0.95
CNOT3-208ENST00000613073 KCNA6P17658 529 aa21■□□□□ 0.95
CNOT3-208ENST00000613073 CDK12Q9NYV4 1490 aaPredicted RBP20.99■□□□□ 0.95
CNOT3-208ENST00000613073 IGHDP01880 384 aa20.98■□□□□ 0.95
CNOT3-208ENST00000613073 VSIG10Q8N0Z9 540 aa20.98■□□□□ 0.95
CNOT3-208ENST00000613073 SMC4Q9NTJ3 1288 aa20.98■□□□□ 0.95
CNOT3-208ENST00000613073 NGDNQ8NEJ9 315 aaKnown RBP20.97■□□□□ 0.95
CNOT3-208ENST00000613073 USP6P35125 1406 aa20.97■□□□□ 0.95
CNOT3-208ENST00000613073 NFE2L2Q16236 605 aa20.97■□□□□ 0.95
CNOT3-208ENST00000613073 IL16Q14005 1332 aa20.96■□□□□ 0.95
CNOT3-208ENST00000613073 RBM33Q96EV2 1170 aaKnown RBP20.96■□□□□ 0.95
CNOT3-208ENST00000613073 SSH1Q8WYL5 1049 aa20.96■□□□□ 0.95
CNOT3-208ENST00000613073 RIMS1Q86UR5 1692 aaKnown RBP20.95■□□□□ 0.94
CNOT3-208ENST00000613073 TOPAZ1Q8N9V7 1692 aa20.95■□□□□ 0.94
CNOT3-208ENST00000613073 C8orf34Q49A92 452 aa20.95■□□□□ 0.94
CNOT3-208ENST00000613073 PTCH1Q13635 1447 aa20.95■□□□□ 0.94
CNOT3-208ENST00000613073 FAM161AQ3B820 660 aa20.95■□□□□ 0.94
CNOT3-208ENST00000613073 CEP170BQ9Y4F5 1589 aaPredicted RBP20.94■□□□□ 0.94
CNOT3-208ENST00000613073 ZKSCAN2Q63HK3 967 aa20.93■□□□□ 0.94
CNOT3-208ENST00000613073 AEBP1Q8IUX7 1158 aa20.93■□□□□ 0.94
CNOT3-208ENST00000613073 RGPD8O14715 1765 aaPredicted RBP20.93■□□□□ 0.94
CNOT3-208ENST00000613073 EIF4A2Q14240 407 aaKnown RBP20.93■□□□□ 0.94
CNOT3-208ENST00000613073 HSP90AB2PQ58FF8 381 aa20.93■□□□□ 0.94
CNOT3-208ENST00000613073 FTSJ3Q8IY81 847 aaKnown RBP20.93■□□□□ 0.94
CNOT3-208ENST00000613073 CT47B1P0C2W7 299 aaPredicted RBP20.92■□□□□ 0.94
CNOT3-208ENST00000613073 NAP1L5Q96NT1 182 aaPredicted RBP20.92■□□□□ 0.94
CNOT3-208ENST00000613073 DIP2AQ14689 1571 aa20.92■□□□□ 0.94
CNOT3-208ENST00000613073 NRKQ7Z2Y5 1582 aa20.92■□□□□ 0.94
CNOT3-208ENST00000613073 OVOS2A0A0J9YW53 1432 aa20.92■□□□□ 0.94
CNOT3-208ENST00000613073 OVOS2Q6IE36 1432 aa20.92■□□□□ 0.94
CNOT3-208ENST00000613073 FAM83GA6ND36 823 aa20.91■□□□□ 0.94
CNOT3-208ENST00000613073 SULT6B1Q6IMI4 303 aa20.91■□□□□ 0.94
CNOT3-208ENST00000613073 ZMYND15Q9H091 742 aa20.91■□□□□ 0.94
CNOT3-208ENST00000613073 SLKQ9H2G2 1235 aaPredicted RBP20.91■□□□□ 0.94
CNOT3-208ENST00000613073 DCTN1Q14203 1278 aa20.9■□□□□ 0.94
CNOT3-208ENST00000613073 ANKLE2Q86XL3 938 aa20.9■□□□□ 0.94
CNOT3-208ENST00000613073 DZIP1LQ8IYY4 767 aaKnown RBP20.9■□□□□ 0.94
CNOT3-208ENST00000613073 PCDHB15Q9Y5E8 787 aa20.9■□□□□ 0.94
CNOT3-208ENST00000613073 GLIPR1L2Q4G1C9 344 aa20.9■□□□□ 0.94
CNOT3-208ENST00000613073 NOB1Q9ULX3 412 aaKnown RBP20.9■□□□□ 0.94
CNOT3-208ENST00000613073 NUTM2GQ5VZR2 741 aa20.89■□□□□ 0.93
CNOT3-208ENST00000613073 TRIM27P14373 513 aa20.89■□□□□ 0.93
CNOT3-208ENST00000613073 ELL2O00472 640 aaPredicted RBP20.88■□□□□ 0.93
CNOT3-208ENST00000613073 MVPQ14764 893 aaKnown RBP20.88■□□□□ 0.93
CNOT3-208ENST00000613073 SSH2Q76I76 1423 aa20.88■□□□□ 0.93
CNOT3-208ENST00000613073 XRN1Q8IZH2 1706 aaKnown RBP20.87■□□□□ 0.93
CNOT3-208ENST00000613073 MAP3K19Q56UN5 1328 aa20.86■□□□□ 0.93
CNOT3-208ENST00000613073 TTC21AQ8NDW8 1320 aa20.85■□□□□ 0.93
CNOT3-208ENST00000613073 ATF7IPQ6VMQ6 1270 aa20.85■□□□□ 0.93
CNOT3-208ENST00000613073 TSPYL6Q8N831 410 aa20.85■□□□□ 0.93
CNOT3-208ENST00000613073 NLRP6P59044 892 aa20.85■□□□□ 0.93
CNOT3-208ENST00000613073 ITPRIPQ8IWB1 547 aa20.85■□□□□ 0.93
CNOT3-208ENST00000613073 MBIPQ9NS73 344 aa20.85■□□□□ 0.93
CNOT3-208ENST00000613073 USP31Q70CQ4 1352 aa20.84■□□□□ 0.93
CNOT3-208ENST00000613073 CALD1Q05682 793 aaKnown RBP20.84■□□□□ 0.93
CNOT3-208ENST00000613073 PEAK1Q9H792 1746 aa20.83■□□□□ 0.93
CNOT3-208ENST00000613073 GNAI1P63096 354 aa20.83■□□□□ 0.93
CNOT3-208ENST00000613073 DLG5Q8TDM6 1919 aa20.83■□□□□ 0.92
CNOT3-208ENST00000613073 IFT57Q9NWB7 429 aa20.83■□□□□ 0.92
CNOT3-208ENST00000613073 C14orf37Q86TY3 774 aa20.82■□□□□ 0.92
CNOT3-208ENST00000613073 LMOD3Q0VAK6 560 aa20.82■□□□□ 0.92
CNOT3-208ENST00000613073 PIK3R4Q99570 1358 aa20.82■□□□□ 0.92
CNOT3-208ENST00000613073 AMPHP49418 695 aa20.81■□□□□ 0.92
CNOT3-208ENST00000613073 VAMP4O75379 141 aa20.81■□□□□ 0.92
CNOT3-208ENST00000613073 TMEM57Q8N5G2 664 aa20.81■□□□□ 0.92
CNOT3-208ENST00000613073 NALCNQ8IZF0 1738 aa20.8■□□□□ 0.92
CNOT3-208ENST00000613073 ZNF853P0CG23 659 aa20.8■□□□□ 0.92
CNOT3-208ENST00000613073 ABTB2Q8N961 1025 aa20.8■□□□□ 0.92
CNOT3-208ENST00000613073 HSP90AA2PQ14568 343 aaPredicted RBP20.8■□□□□ 0.92
CNOT3-208ENST00000613073 ALDH1L2Q3SY69 923 aa20.8■□□□□ 0.92
CNOT3-208ENST00000613073 MCM10Q7L590 875 aa20.8■□□□□ 0.92
CNOT3-208ENST00000613073 CFAP44Q96MT7 982 aa20.8■□□□□ 0.92
CNOT3-208ENST00000613073 KIF16BQ96L93 1317 aa20.79■□□□□ 0.92
CNOT3-208ENST00000613073 AAMPQ13685 434 aa20.79■□□□□ 0.92
CNOT3-208ENST00000613073 GZF1Q9H116 711 aaPredicted RBP20.79■□□□□ 0.92
CNOT3-208ENST00000613073 IPO8O15397 1037 aaKnown RBP20.79■□□□□ 0.92
CNOT3-208ENST00000613073 C8orf58Q8NAV2 365 aa20.79■□□□□ 0.92
CNOT3-208ENST00000613073 ANKARQ7Z5J8 1434 aa20.77■□□□□ 0.92
CNOT3-208ENST00000613073 TWISTNBQ3B726 338 aaPredicted RBP20.77■□□□□ 0.92
CNOT3-208ENST00000613073 RWDD1Q9H446 243 aaPredicted RBP20.77■□□□□ 0.92
CNOT3-208ENST00000613073 DDX19BQ9UMR2 479 aa20.77■□□□□ 0.92
CNOT3-208ENST00000613073 PANK2Q9BZ23 570 aa20.77■□□□□ 0.92
CNOT3-208ENST00000613073 PIK3C2AO00443 1686 aa20.77■□□□□ 0.92
CNOT3-208ENST00000613073 FLT4P35916 1363 aa20.76■□□□□ 0.91
CNOT3-208ENST00000613073 PHF8Q9UPP1 1060 aa20.76■□□□□ 0.91
CNOT3-208ENST00000613073 ADAMTSL3P82987 1691 aa20.76■□□□□ 0.91
CNOT3-208ENST00000613073 SBNO1A3KN83 1393 aa20.76■□□□□ 0.91
CNOT3-208ENST00000613073 FOXO3O43524 673 aa20.75■□□□□ 0.91
CNOT3-208ENST00000613073 L1TD1Q5T7N2 865 aaKnown RBP20.75■□□□□ 0.91
CNOT3-208ENST00000613073 FMN2Q9NZ56 1722 aa20.75■□□□□ 0.91
CNOT3-208ENST00000613073 SEC24BO95487 1268 aa20.75■□□□□ 0.91
CNOT3-208ENST00000613073 CHD2O14647 1828 aaKnown RBP20.75■□□□□ 0.91
CNOT3-208ENST00000613073 HSP90AA1P07900 732 aaKnown RBP20.74■□□□□ 0.91
CNOT3-208ENST00000613073 ESCO1Q5FWF5 840 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 166.4 ms