RNA–Protein interactions for RNA: ENST00000612683.1

FDPS-221, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FDPS, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-221ENST00000612683 SBNO2Q9Y2G9 1366 aa20.9■□□□□ 0.94
FDPS-221ENST00000612683 SLC12A5Q9H2X9 1139 aa20.9■□□□□ 0.94
FDPS-221ENST00000612683 COL18A1P39060 1754 aa20.9■□□□□ 0.94
FDPS-221ENST00000612683 PARD3Q8TEW0 1356 aa20.89■□□□□ 0.93
FDPS-221ENST00000612683 HDGFL2Q7Z4V5 671 aaPredicted RBP20.89■□□□□ 0.93
FDPS-221ENST00000612683 NBPF14Q5TI25 921 aa20.88■□□□□ 0.93
FDPS-221ENST00000612683 PARP4Q9UKK3 1724 aaKnown RBP20.87■□□□□ 0.93
FDPS-221ENST00000612683 NME9Q86XW9 330 aa20.87■□□□□ 0.93
FDPS-221ENST00000612683 CDCA7Q9BWT1 371 aaPredicted RBP20.87■□□□□ 0.93
FDPS-221ENST00000612683 CARD10Q9BWT7 1032 aa20.87■□□□□ 0.93
FDPS-221ENST00000612683 LRP5O75197 1615 aa20.86■□□□□ 0.93
FDPS-221ENST00000612683 RGPD5Q99666 1765 aa20.85■□□□□ 0.93
FDPS-221ENST00000612683 TERF2IPQ9NYB0 399 aa20.85■□□□□ 0.93
FDPS-221ENST00000612683 OVOS2A0A0G2JMS6 1433 aa20.85■□□□□ 0.93
FDPS-221ENST00000612683 OVOS2A0A0J9YW53 1432 aa20.85■□□□□ 0.93
FDPS-221ENST00000612683 OVOS2Q6IE36 1432 aa20.85■□□□□ 0.93
FDPS-221ENST00000612683 EXOC5O00471 708 aa20.84■□□□□ 0.93
FDPS-221ENST00000612683 TRIM26Q12899 539 aaPredicted RBP20.84■□□□□ 0.93
FDPS-221ENST00000612683 MARCH10Q8NA82 808 aaPredicted RBP20.84■□□□□ 0.93
FDPS-221ENST00000612683 USP31Q70CQ4 1352 aa20.84■□□□□ 0.93
FDPS-221ENST00000612683 PUS7Q96PZ0 661 aaKnown RBP20.83■□□□□ 0.93
FDPS-221ENST00000612683 CD163L1Q9NR16 1453 aa20.81■□□□□ 0.92
FDPS-221ENST00000612683 MON2Q7Z3U7 1717 aa20.81■□□□□ 0.92
FDPS-221ENST00000612683 ST20-MTHFSA0A0A6YYL1 179 aa20.81■□□□□ 0.92
FDPS-221ENST00000612683 PLSCR1O15162 318 aa20.81■□□□□ 0.92
FDPS-221ENST00000612683 BCL11BQ9C0K0 894 aaPredicted RBP20.81■□□□□ 0.92
FDPS-221ENST00000612683 NFAT5O94916 1531 aa20.81■□□□□ 0.92
FDPS-221ENST00000612683 PTF1AQ7RTS3 328 aa20.8■□□□□ 0.92
FDPS-221ENST00000612683 NLRP2Q9NX02 1062 aa20.8■□□□□ 0.92
FDPS-221ENST00000612683 LRRC37A3O60309 1634 aa20.79■□□□□ 0.92
FDPS-221ENST00000612683 CCDC7Q96M83 1385 aa20.79■□□□□ 0.92
FDPS-221ENST00000612683 SLC24A1O60721 1099 aa20.78■□□□□ 0.92
FDPS-221ENST00000612683 TESK2Q96S53 571 aa20.78■□□□□ 0.92
FDPS-221ENST00000612683 PEAK1Q9H792 1746 aa20.78■□□□□ 0.92
FDPS-221ENST00000612683 EDC4Q6P2E9 1401 aaKnown RBP20.78■□□□□ 0.92
FDPS-221ENST00000612683 RREB1Q92766 1687 aa20.77■□□□□ 0.92
FDPS-221ENST00000612683 SBF2Q86WG5 1849 aa20.76■□□□□ 0.91
FDPS-221ENST00000612683 A0A1W2PP64 1363 aa20.76■□□□□ 0.91
FDPS-221ENST00000612683 ANKRD24Q8TF21 1146 aa20.76■□□□□ 0.91
FDPS-221ENST00000612683 NUP188Q5SRE5 1749 aa20.75■□□□□ 0.91
FDPS-221ENST00000612683 ERBB3P21860 1342 aa20.75■□□□□ 0.91
FDPS-221ENST00000612683 WNK3Q9BYP7 1800 aa20.74■□□□□ 0.91
FDPS-221ENST00000612683 IL2RBP14784 551 aa20.73■□□□□ 0.91
FDPS-221ENST00000612683 ABCC6O95255 1503 aa20.73■□□□□ 0.91
FDPS-221ENST00000612683 BCL9O00512 1426 aa20.72■□□□□ 0.91
FDPS-221ENST00000612683 PROM2Q8N271 834 aa20.72■□□□□ 0.91
FDPS-221ENST00000612683 SPON1Q9HCB6 807 aa20.72■□□□□ 0.91
FDPS-221ENST00000612683 KCNQ2O43526 872 aa20.71■□□□□ 0.91
FDPS-221ENST00000612683 IP6K1Q92551 441 aa20.71■□□□□ 0.91
FDPS-221ENST00000612683 LTV1Q96GA3 475 aaPredicted RBP20.71■□□□□ 0.91
FDPS-221ENST00000612683 COG3Q96JB2 828 aa20.71■□□□□ 0.91
FDPS-221ENST00000612683 NINLQ9Y2I6 1382 aa20.71■□□□□ 0.91
FDPS-221ENST00000612683 USP54Q70EL1 1684 aa20.7■□□□□ 0.91
FDPS-221ENST00000612683 LTN1O94822 1766 aa20.7■□□□□ 0.9
FDPS-221ENST00000612683 ACSBG1Q96GR2 724 aa20.7■□□□□ 0.9
FDPS-221ENST00000612683 TMF1P82094 1093 aa20.69■□□□□ 0.9
FDPS-221ENST00000612683 TXNRD1Q16881 649 aa20.69■□□□□ 0.9
FDPS-221ENST00000612683 ANO8Q9HCE9 1232 aaPredicted RBP20.69■□□□□ 0.9
FDPS-221ENST00000612683 PPP1R1BQ9UD71 204 aaPredicted RBP20.69■□□□□ 0.9
FDPS-221ENST00000612683 KAT6BQ8WYB5 2073 aa20.68■□□□□ 0.9
FDPS-221ENST00000612683 FBLN1P23142 703 aa20.68■□□□□ 0.9
FDPS-221ENST00000612683 TNS2Q63HR2 1409 aa20.68■□□□□ 0.9
FDPS-221ENST00000612683 AMPHP49418 695 aa20.67■□□□□ 0.9
FDPS-221ENST00000612683 RGPD3A6NKT7 1758 aaPredicted RBP20.65■□□□□ 0.9
FDPS-221ENST00000612683 RGPD4Q7Z3J3 1758 aa20.65■□□□□ 0.9
FDPS-221ENST00000612683 MAP3K19Q56UN5 1328 aa20.65■□□□□ 0.9
FDPS-221ENST00000612683 STK32BQ9NY57 414 aa20.65■□□□□ 0.9
FDPS-221ENST00000612683 USP47Q96K76 1375 aa20.64■□□□□ 0.89
FDPS-221ENST00000612683 DDX54Q8TDD1 881 aaKnown RBP20.64■□□□□ 0.89
FDPS-221ENST00000612683 ANKRD36BQ8N2N9 1353 aa20.63■□□□□ 0.89
FDPS-221ENST00000612683 HOXC9P31274 260 aa20.63■□□□□ 0.89
FDPS-221ENST00000612683 PDGFDQ9GZP0 370 aaPredicted RBP20.63■□□□□ 0.89
FDPS-221ENST00000612683 FYB1O15117 783 aa20.62■□□□□ 0.89
FDPS-221ENST00000612683 CDCA8Q53HL2 280 aa20.62■□□□□ 0.89
FDPS-221ENST00000612683 GGNBP2Q9H3C7 697 aa20.62■□□□□ 0.89
FDPS-221ENST00000612683 SLC15A2Q16348 729 aa20.61■□□□□ 0.89
FDPS-221ENST00000612683 ZBTB7AO95365 584 aa20.6■□□□□ 0.89
FDPS-221ENST00000612683 RRS1Q15050 365 aaKnown RBP20.6■□□□□ 0.89
FDPS-221ENST00000612683 PCGF6Q9BYE7 350 aa20.59■□□□□ 0.89
FDPS-221ENST00000612683 ATF5Q9Y2D1 282 aaPredicted RBP20.59■□□□□ 0.89
FDPS-221ENST00000612683 DCAF8L1A6NGE4 600 aa20.57■□□□□ 0.88
FDPS-221ENST00000612683 ZCRB1Q8TBF4 217 aaKnown RBP20.56■□□□□ 0.88
FDPS-221ENST00000612683 TIMELESSQ9UNS1 1208 aa20.56■□□□□ 0.88
FDPS-221ENST00000612683 NHSQ6T4R5 1651 aa20.56■□□□□ 0.88
FDPS-221ENST00000612683 SYTL4Q96C24 671 aaPredicted RBP20.55■□□□□ 0.88
FDPS-221ENST00000612683 NBPF6Q5VWK0 638 aa20.54■□□□□ 0.88
FDPS-221ENST00000612683 NBPF4Q96M43 638 aa20.54■□□□□ 0.88
FDPS-221ENST00000612683 PRIM1P49642 420 aaKnown RBP20.53■□□□□ 0.88
FDPS-221ENST00000612683 CASZ1Q86V15 1759 aa20.53■□□□□ 0.88
FDPS-221ENST00000612683 FAM208AQ9UK61 1670 aaKnown RBP20.52■□□□□ 0.88
FDPS-221ENST00000612683 USHBP1Q8N6Y0 703 aa20.52■□□□□ 0.88
FDPS-221ENST00000612683 CARD14Q9BXL6 1004 aa20.52■□□□□ 0.88
FDPS-221ENST00000612683 LRRC4BQ9NT99 713 aa20.52■□□□□ 0.88
FDPS-221ENST00000612683 BTAF1O14981 1849 aa20.52■□□□□ 0.88
FDPS-221ENST00000612683 RTL1A6NKG5 1358 aa20.51■□□□□ 0.87
FDPS-221ENST00000612683 PTGER2P43116 358 aa20.51■□□□□ 0.87
FDPS-221ENST00000612683 HSP90AB2PQ58FF8 381 aa20.51■□□□□ 0.87
FDPS-221ENST00000612683 MTFR1LQ9H019 292 aa20.51■□□□□ 0.87
FDPS-221ENST00000612683 RGPD2P0DJD1 1756 aa20.51■□□□□ 0.87
FDPS-221ENST00000612683 RAPGEF4Q8WZA2 1011 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms