RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 EMILIN1Q9Y6C2 1016 aa14.97□□□□□ -0.01
CDH1-212ENST00000611625 DISP1Q96F81 1524 aa14.97□□□□□ -0.01
CDH1-212ENST00000611625 FIBPO43427 364 aa14.97□□□□□ -0.01
CDH1-212ENST00000611625 TPM2P07951 284 aa14.97□□□□□ -0.01
CDH1-212ENST00000611625 CPLX2Q6PUV4 134 aaKnown RBP14.97□□□□□ -0.01
CDH1-212ENST00000611625 RAPGEF4Q8WZA2 1011 aa14.97□□□□□ -0.01
CDH1-212ENST00000611625 SRCIN1Q9C0H9 1055 aa14.97□□□□□ -0.01
CDH1-212ENST00000611625 IL16Q14005 1332 aa14.97□□□□□ -0.01
CDH1-212ENST00000611625 NME9Q86XW9 330 aa14.96□□□□□ -0.01
CDH1-212ENST00000611625 BMP2KLQ5H9B9 411 aa14.96□□□□□ -0.01
CDH1-212ENST00000611625 WDR33Q9C0J8 1336 aaKnown RBP14.96□□□□□ -0.01
CDH1-212ENST00000611625 ABCA5Q8WWZ7 1642 aa14.96□□□□□ -0.01
CDH1-212ENST00000611625 CPLX1O14810 134 aa14.96□□□□□ -0.02
CDH1-212ENST00000611625 LETM1O95202 739 aaPredicted RBP14.95□□□□□ -0.02
CDH1-212ENST00000611625 HDAC1Q13547 482 aaPredicted RBP14.95□□□□□ -0.02
CDH1-212ENST00000611625 ZNF592Q92610 1267 aa14.95□□□□□ -0.02
CDH1-212ENST00000611625 ANKRD36BQ8N2N9 1353 aa14.95□□□□□ -0.02
CDH1-212ENST00000611625 EXOC6BQ9Y2D4 811 aa14.95□□□□□ -0.02
CDH1-212ENST00000611625 CCDC73Q6ZRK6 1079 aa14.95□□□□□ -0.02
CDH1-212ENST00000611625 MCM10Q7L590 875 aa14.95□□□□□ -0.02
CDH1-212ENST00000611625 PDCP20941 246 aa14.94□□□□□ -0.02
CDH1-212ENST00000611625 TNPO1Q92973 898 aaKnown RBP14.94□□□□□ -0.02
CDH1-212ENST00000611625 A2MP01023 1474 aa14.94□□□□□ -0.02
CDH1-212ENST00000611625 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.94□□□□□ -0.02
CDH1-212ENST00000611625 TULP1O00294 542 aaPredicted RBP14.94□□□□□ -0.02
CDH1-212ENST00000611625 ERC1Q8IUD2 1116 aa14.94□□□□□ -0.02
CDH1-212ENST00000611625 SMARCA5O60264 1052 aaPredicted RBP14.93□□□□□ -0.02
CDH1-212ENST00000611625 PLEKHO1Q53GL0 409 aaPredicted RBP14.93□□□□□ -0.02
CDH1-212ENST00000611625 IL1RAPL2Q9NP60 686 aa14.93□□□□□ -0.02
CDH1-212ENST00000611625 FOSBP53539 338 aa14.93□□□□□ -0.02
CDH1-212ENST00000611625 CARD14Q9BXL6 1004 aa14.93□□□□□ -0.02
CDH1-212ENST00000611625 HIP1O00291 1037 aa14.93□□□□□ -0.02
CDH1-212ENST00000611625 TRAPPC8Q9Y2L5 1435 aa14.93□□□□□ -0.02
CDH1-212ENST00000611625 SPINK5Q9NQ38 1064 aaPredicted RBP14.93□□□□□ -0.02
CDH1-212ENST00000611625 TBC1D9Q6ZT07 1266 aa14.92□□□□□ -0.02
CDH1-212ENST00000611625 NEUROD6Q96NK8 337 aa14.92□□□□□ -0.02
CDH1-212ENST00000611625 MIS18AQ9NYP9 233 aa14.92□□□□□ -0.02
CDH1-212ENST00000611625 TNNQ9UQP3 1299 aa14.92□□□□□ -0.02
CDH1-212ENST00000611625 RLBP1P12271 317 aa14.92□□□□□ -0.02
CDH1-212ENST00000611625 SSFA2P28290 1259 aa14.92□□□□□ -0.02
CDH1-212ENST00000611625 NLRP2Q9NX02 1062 aa14.92□□□□□ -0.02
CDH1-212ENST00000611625 SRGAP3O43295 1099 aa14.92□□□□□ -0.02
CDH1-212ENST00000611625 MAP4K4O95819 1239 aaPredicted RBP14.92□□□□□ -0.02
CDH1-212ENST00000611625 SLC26A8Q96RN1 970 aa14.92□□□□□ -0.02
CDH1-212ENST00000611625 MAP7D2Q96T17 732 aa14.92□□□□□ -0.02
CDH1-212ENST00000611625 CYP46A1Q9Y6A2 500 aa14.91□□□□□ -0.02
CDH1-212ENST00000611625 RASSF8Q8NHQ8 419 aa14.91□□□□□ -0.02
CDH1-212ENST00000611625 TPM3P06753 285 aa14.91□□□□□ -0.02
CDH1-212ENST00000611625 TRDNQ13061 729 aa14.91□□□□□ -0.02
CDH1-212ENST00000611625 SYNE3Q6ZMZ3 975 aa14.9□□□□□ -0.02
CDH1-212ENST00000611625 NUCB1Q02818 461 aa14.9□□□□□ -0.02
CDH1-212ENST00000611625 ZMYM4Q5VZL5 1548 aa14.9□□□□□ -0.02
CDH1-212ENST00000611625 MX1P20591 662 aa14.9□□□□□ -0.02
CDH1-212ENST00000611625 TRIM29Q14134 588 aa14.9□□□□□ -0.02
CDH1-212ENST00000611625 APPP05067 770 aa14.89□□□□□ -0.03
CDH1-212ENST00000611625 ZNF530Q6P9A1 599 aaPredicted RBP14.89□□□□□ -0.03
CDH1-212ENST00000611625 CREBRFQ8IUR6 639 aa14.89□□□□□ -0.03
CDH1-212ENST00000611625 WASLO00401 505 aaPredicted RBP14.89□□□□□ -0.03
CDH1-212ENST00000611625 FYB1O15117 783 aa14.89□□□□□ -0.03
CDH1-212ENST00000611625 FBXO31Q5XUX0 539 aaPredicted RBP14.89□□□□□ -0.03
CDH1-212ENST00000611625 MTERF4Q7Z6M4 381 aaKnown RBP14.89□□□□□ -0.03
CDH1-212ENST00000611625 MBIPQ9NS73 344 aa14.89□□□□□ -0.03
CDH1-212ENST00000611625 KDM2BQ8NHM5 1336 aa14.89□□□□□ -0.03
CDH1-212ENST00000611625 INSRP06213 1382 aa14.89□□□□□ -0.03
CDH1-212ENST00000611625 ZSCAN30Q86W11 494 aa14.89□□□□□ -0.03
CDH1-212ENST00000611625 AEBP1Q8IUX7 1158 aa14.89□□□□□ -0.03
CDH1-212ENST00000611625 NPC1L1Q9UHC9 1359 aa14.89□□□□□ -0.03
CDH1-212ENST00000611625 FBXW7Q969H0 707 aa14.88□□□□□ -0.03
CDH1-212ENST00000611625 UPF3BQ9BZI7 483 aaKnown RBP14.88□□□□□ -0.03
CDH1-212ENST00000611625 TRIM5Q9C035 493 aa14.88□□□□□ -0.03
CDH1-212ENST00000611625 BLMP54132 1417 aaPredicted RBP14.88□□□□□ -0.03
CDH1-212ENST00000611625 AKAP17AQ02040 695 aaKnown RBP14.88□□□□□ -0.03
CDH1-212ENST00000611625 ARHGAP45Q92619 1136 aa14.88□□□□□ -0.03
CDH1-212ENST00000611625 F6X3S4 739 aa14.87□□□□□ -0.03
CDH1-212ENST00000611625 RALYLQ86SE5 291 aaKnown RBP14.87□□□□□ -0.03
CDH1-212ENST00000611625 KDM6BO15054 1643 aa14.87□□□□□ -0.03
CDH1-212ENST00000611625 SYCE3A1L190 88 aa14.87□□□□□ -0.03
CDH1-212ENST00000611625 DNAJC2Q99543 621 aaKnown RBP14.87□□□□□ -0.03
CDH1-212ENST00000611625 GNAT3A8MTJ3 354 aa14.87□□□□□ -0.03
CDH1-212ENST00000611625 ESCO1Q5FWF5 840 aa14.87□□□□□ -0.03
CDH1-212ENST00000611625 SEC24BO95487 1268 aa14.87□□□□□ -0.03
CDH1-212ENST00000611625 CWC27Q6UX04 472 aaKnown RBP14.87□□□□□ -0.03
CDH1-212ENST00000611625 SDF4Q9BRK5 362 aa14.87□□□□□ -0.03
CDH1-212ENST00000611625 HMGN5P82970 282 aaKnown RBP14.86□□□□□ -0.03
CDH1-212ENST00000611625 WASHC4Q2M389 1173 aa14.86□□□□□ -0.03
CDH1-212ENST00000611625 NUTM1Q86Y26 1132 aa14.86□□□□□ -0.03
CDH1-212ENST00000611625 MPNDQ8N594 471 aa14.86□□□□□ -0.03
CDH1-212ENST00000611625 PBRM1Q86U86 1689 aa14.86□□□□□ -0.03
CDH1-212ENST00000611625 CCDC192P0DO97 292 aa14.86□□□□□ -0.03
CDH1-212ENST00000611625 KRT85P78386 507 aa14.86□□□□□ -0.03
CDH1-212ENST00000611625 PTPRCP08575 1304 aa14.85□□□□□ -0.03
CDH1-212ENST00000611625 FAM83GA6ND36 823 aa14.85□□□□□ -0.03
CDH1-212ENST00000611625 FBLN1P23142 703 aa14.85□□□□□ -0.03
CDH1-212ENST00000611625 TPD52L1Q16890 204 aaPredicted RBP14.85□□□□□ -0.03
CDH1-212ENST00000611625 HOMER1Q86YM7 354 aa14.85□□□□□ -0.03
CDH1-212ENST00000611625 JAKMIP1Q96N16 626 aaKnown RBP14.85□□□□□ -0.03
CDH1-212ENST00000611625 ANKRD1Q15327 319 aa14.85□□□□□ -0.03
CDH1-212ENST00000611625 RBM10P98175 930 aaKnown RBP14.85□□□□□ -0.03
CDH1-212ENST00000611625 LARP1BQ659C4 914 aaKnown RBP14.85□□□□□ -0.03
CDH1-212ENST00000611625 THEMISQ8N1K5 641 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms