RNA–Protein interactions for RNA: ENST00000610970.1

HOXA4-204, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-204ENST00000610970 IPO8O15397 1037 aaKnown RBP30.45■■■□□ 2.47
HOXA4-204ENST00000610970 BRPF1P55201 1214 aaPredicted RBP30.45■■■□□ 2.47
HOXA4-204ENST00000610970 OVOS2A0A0J9YW53 1432 aa30.45■■■□□ 2.46
HOXA4-204ENST00000610970 OVOS2Q6IE36 1432 aa30.45■■■□□ 2.46
HOXA4-204ENST00000610970 SSH1Q8WYL5 1049 aa30.44■■■□□ 2.46
HOXA4-204ENST00000610970 AMOTL2Q9Y2J4 779 aa30.44■■■□□ 2.46
HOXA4-204ENST00000610970 NALCNQ8IZF0 1738 aa30.44■■■□□ 2.46
HOXA4-204ENST00000610970 NPM2Q86SE8 214 aaKnown RBP30.43■■■□□ 2.46
HOXA4-204ENST00000610970 SLC26A8Q96RN1 970 aa30.43■■■□□ 2.46
HOXA4-204ENST00000610970 TTC21AQ8NDW8 1320 aa30.43■■■□□ 2.46
HOXA4-204ENST00000610970 GNAI1P63096 354 aa30.42■■■□□ 2.46
HOXA4-204ENST00000610970 C8orf34Q49A92 452 aa30.42■■■□□ 2.46
HOXA4-204ENST00000610970 ATF7IPQ6VMQ6 1270 aa30.42■■■□□ 2.46
HOXA4-204ENST00000610970 IFT57Q9NWB7 429 aa30.42■■■□□ 2.46
HOXA4-204ENST00000610970 LMTK3Q96Q04 1460 aa30.42■■■□□ 2.46
HOXA4-204ENST00000610970 PAK3O75914 559 aaPredicted RBP30.42■■■□□ 2.46
HOXA4-204ENST00000610970 USP31Q70CQ4 1352 aa30.41■■■□□ 2.46
HOXA4-204ENST00000610970 HMOX1P09601 288 aa30.41■■■□□ 2.46
HOXA4-204ENST00000610970 RGS3P49796 1198 aa30.41■■■□□ 2.46
HOXA4-204ENST00000610970 SSH2Q76I76 1423 aa30.41■■■□□ 2.46
HOXA4-204ENST00000610970 PHACTR3Q96KR7 559 aa30.41■■■□□ 2.46
HOXA4-204ENST00000610970 DDX19BQ9UMR2 479 aa30.41■■■□□ 2.46
HOXA4-204ENST00000610970 CEP170BQ9Y4F5 1589 aaPredicted RBP30.41■■■□□ 2.46
HOXA4-204ENST00000610970 PIK3R4Q99570 1358 aa30.4■■■□□ 2.46
HOXA4-204ENST00000610970 SETD1BQ9UPS6 1966 aaKnown RBP30.4■■■□□ 2.46
HOXA4-204ENST00000610970 TNNQ9UQP3 1299 aa30.39■■■□□ 2.46
HOXA4-204ENST00000610970 PCDHB15Q9Y5E8 787 aa30.39■■■□□ 2.46
HOXA4-204ENST00000610970 XRN1Q8IZH2 1706 aaKnown RBP30.39■■■□□ 2.46
HOXA4-204ENST00000610970 RRS1Q15050 365 aaKnown RBP30.39■■■□□ 2.45
HOXA4-204ENST00000610970 VIRMAQ69YN4 1812 aaKnown RBP30.38■■■□□ 2.45
HOXA4-204ENST00000610970 TRIM27P14373 513 aa30.38■■■□□ 2.45
HOXA4-204ENST00000610970 ZNF853P0CG23 659 aa30.36■■■□□ 2.45
HOXA4-204ENST00000610970 ZNF142P52746 1687 aaPredicted RBP30.35■■■□□ 2.45
HOXA4-204ENST00000610970 NOB1Q9ULX3 412 aaKnown RBP30.35■■■□□ 2.45
HOXA4-204ENST00000610970 ANKARQ7Z5J8 1434 aa30.34■■■□□ 2.45
HOXA4-204ENST00000610970 DLG5Q8TDM6 1919 aa30.34■■■□□ 2.45
HOXA4-204ENST00000610970 HSPA2P54652 639 aa30.32■■■□□ 2.44
HOXA4-204ENST00000610970 ARHGAP45Q92619 1136 aa30.32■■■□□ 2.44
HOXA4-204ENST00000610970 CHMP4BQ9H444 224 aaKnown RBP30.32■■■□□ 2.44
HOXA4-204ENST00000610970 CFAP44Q96MT7 982 aa30.31■■■□□ 2.44
HOXA4-204ENST00000610970 HDAC1Q13547 482 aaPredicted RBP30.3■■■□□ 2.44
HOXA4-204ENST00000610970 EIF4A2Q14240 407 aaKnown RBP30.3■■■□□ 2.44
HOXA4-204ENST00000610970 VAMP4O75379 141 aa30.28■■■□□ 2.44
HOXA4-204ENST00000610970 RGPD1P0DJD0 1748 aa30.28■■■□□ 2.44
HOXA4-204ENST00000610970 ITPRIPQ8IWB1 547 aa30.27■■■□□ 2.44
HOXA4-204ENST00000610970 LAS1LQ9Y4W2 734 aaKnown RBP30.27■■■□□ 2.44
HOXA4-204ENST00000610970 PDZRN3Q9UPQ7 1066 aa30.26■■■□□ 2.43
HOXA4-204ENST00000610970 PEAK1Q9H792 1746 aa30.25■■■□□ 2.43
HOXA4-204ENST00000610970 MBIPQ9NS73 344 aa30.25■■■□□ 2.43
HOXA4-204ENST00000610970 HAP1P54257 671 aaPredicted RBP30.24■■■□□ 2.43
HOXA4-204ENST00000610970 TMEM57Q8N5G2 664 aa30.24■■■□□ 2.43
HOXA4-204ENST00000610970 ARHGEF10O15013 1369 aa30.23■■■□□ 2.43
HOXA4-204ENST00000610970 NUTM2FA1L443 756 aa30.23■■■□□ 2.43
HOXA4-204ENST00000610970 MRPL50Q8N5N7 158 aaKnown RBP30.23■■■□□ 2.43
HOXA4-204ENST00000610970 NGDNQ8NEJ9 315 aaKnown RBP30.23■■■□□ 2.43
HOXA4-204ENST00000610970 ZBTB40Q9NUA8 1239 aa30.23■■■□□ 2.43
HOXA4-204ENST00000610970 FMN2Q9NZ56 1722 aa30.22■■■□□ 2.43
HOXA4-204ENST00000610970 SBNO1A3KN83 1393 aa30.22■■■□□ 2.43
HOXA4-204ENST00000610970 SULT6B1Q6IMI4 303 aa30.22■■■□□ 2.43
HOXA4-204ENST00000610970 THUMPD2Q9BTF0 503 aaKnown RBP30.21■■■□□ 2.43
HOXA4-204ENST00000610970 USP54Q70EL1 1684 aa30.21■■■□□ 2.43
HOXA4-204ENST00000610970 RGPD8O14715 1765 aaPredicted RBP30.2■■■□□ 2.43
HOXA4-204ENST00000610970 FLT4P35916 1363 aa30.2■■■□□ 2.42
HOXA4-204ENST00000610970 KIF24Q5T7B8 1368 aa30.2■■■□□ 2.42
HOXA4-204ENST00000610970 TWISTNBQ3B726 338 aaPredicted RBP30.18■■■□□ 2.42
HOXA4-204ENST00000610970 SMC5Q8IY18 1101 aa30.16■■■□□ 2.42
HOXA4-204ENST00000610970 PIK3C2AO00443 1686 aa30.16■■■□□ 2.42
HOXA4-204ENST00000610970 HSP90AB2PQ58FF8 381 aa30.16■■■□□ 2.42
HOXA4-204ENST00000610970 MAP3K19Q56UN5 1328 aa30.15■■■□□ 2.42
HOXA4-204ENST00000610970 KCNA6P17658 529 aa30.15■■■□□ 2.42
HOXA4-204ENST00000610970 ANKLE2Q86XL3 938 aa30.14■■■□□ 2.42
HOXA4-204ENST00000610970 AEBP1Q8IUX7 1158 aa30.14■■■□□ 2.42
HOXA4-204ENST00000610970 TSPYL6Q8N831 410 aa30.14■■■□□ 2.42
HOXA4-204ENST00000610970 CHD2O14647 1828 aaKnown RBP30.14■■■□□ 2.42
HOXA4-204ENST00000610970 API5Q9BZZ5 524 aaKnown RBP30.13■■■□□ 2.41
HOXA4-204ENST00000610970 DAXXQ9UER7 740 aaPredicted RBP30.13■■■□□ 2.41
HOXA4-204ENST00000610970 KIAA0232Q92628 1395 aa30.13■■■□□ 2.41
HOXA4-204ENST00000610970 KDRP35968 1356 aa30.12■■■□□ 2.41
HOXA4-204ENST00000610970 ABCC4O15439 1325 aa30.11■■■□□ 2.41
HOXA4-204ENST00000610970 CHL1O00533 1208 aa30.11■■■□□ 2.41
HOXA4-204ENST00000610970 FAM83GA6ND36 823 aa30.1■■■□□ 2.41
HOXA4-204ENST00000610970 C8orf58Q8NAV2 365 aa30.1■■■□□ 2.41
HOXA4-204ENST00000610970 ZBTB7BO15156 539 aaPredicted RBP30.08■■■□□ 2.41
HOXA4-204ENST00000610970 AMPHP49418 695 aa30.08■■■□□ 2.41
HOXA4-204ENST00000610970 UPF2Q9HAU5 1272 aaKnown RBP30.07■■■□□ 2.4
HOXA4-204ENST00000610970 IGSF1Q8N6C5 1336 aa30.06■■■□□ 2.4
HOXA4-204ENST00000610970 USP19O94966 1318 aa30.06■■■□□ 2.4
HOXA4-204ENST00000610970 DCTN1Q14203 1278 aa30.05■■■□□ 2.4
HOXA4-204ENST00000610970 USP35Q9P2H5 1018 aa30.05■■■□□ 2.4
HOXA4-204ENST00000610970 NLRP6P59044 892 aa30.05■■■□□ 2.4
HOXA4-204ENST00000610970 HTATSF1O43719 755 aaKnown RBP30.04■■■□□ 2.4
HOXA4-204ENST00000610970 RTL5Q5HYW3 569 aaPredicted RBP30.04■■■□□ 2.4
HOXA4-204ENST00000610970 MARF1Q9Y4F3 1742 aaKnown RBP30.04■■■□□ 2.4
HOXA4-204ENST00000610970 STRCQ7RTU9 1775 aa30.03■■■□□ 2.4
HOXA4-204ENST00000610970 CRB1P82279 1406 aa30.03■■■□□ 2.4
HOXA4-204ENST00000610970 GAS2L2Q8NHY3 880 aa30.03■■■□□ 2.4
HOXA4-204ENST00000610970 ELL2O00472 640 aaPredicted RBP30.02■■■□□ 2.4
HOXA4-204ENST00000610970 NBR1Q14596 966 aa30.02■■■□□ 2.4
HOXA4-204ENST00000610970 GCC1Q96CN9 775 aa30.02■■■□□ 2.4
HOXA4-204ENST00000610970 NUCB1Q02818 461 aa30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms