RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 SOX12O15370 315 aa19.69■□□□□ 0.74
HDDC2-206ENST00000608461 BARGINQ6ZT62 677 aa19.69■□□□□ 0.74
HDDC2-206ENST00000608461 CRB1P82279 1406 aa19.68■□□□□ 0.74
HDDC2-206ENST00000608461 LTN1O94822 1766 aa19.68■□□□□ 0.74
HDDC2-206ENST00000608461 ZBTB7CA1YPR0 619 aa19.68■□□□□ 0.74
HDDC2-206ENST00000608461 SEPT12Q8IYM1 358 aa19.68■□□□□ 0.74
HDDC2-206ENST00000608461 AXIN2Q9Y2T1 843 aa19.68■□□□□ 0.74
HDDC2-206ENST00000608461 KIF7Q2M1P5 1343 aa19.68■□□□□ 0.74
HDDC2-206ENST00000608461 LARP1Q6PKG0 1096 aaKnown RBP19.67■□□□□ 0.74
HDDC2-206ENST00000608461 GGNBP2Q9H3C7 697 aa19.67■□□□□ 0.74
HDDC2-206ENST00000608461 PANK3Q9H999 370 aa19.67■□□□□ 0.74
HDDC2-206ENST00000608461 WDR17Q8IZU2 1322 aa19.67■□□□□ 0.74
HDDC2-206ENST00000608461 FAM98CQ17RN3 349 aaKnown RBP19.66■□□□□ 0.74
HDDC2-206ENST00000608461 TCP11L2Q8N4U5 519 aa19.66■□□□□ 0.74
HDDC2-206ENST00000608461 BLMP54132 1417 aaPredicted RBP19.66■□□□□ 0.74
HDDC2-206ENST00000608461 IP6K1Q92551 441 aa19.64■□□□□ 0.73
HDDC2-206ENST00000608461 KIF24Q5T7B8 1368 aa19.64■□□□□ 0.73
HDDC2-206ENST00000608461 THSD7AQ9UPZ6 1657 aa19.64■□□□□ 0.73
HDDC2-206ENST00000608461 RGPD5Q99666 1765 aa19.64■□□□□ 0.73
HDDC2-206ENST00000608461 RTL1A6NKG5 1358 aa19.63■□□□□ 0.73
HDDC2-206ENST00000608461 NSD2O96028 1365 aa19.63■□□□□ 0.73
HDDC2-206ENST00000608461 TOM1L2Q6ZVM7 507 aa19.63■□□□□ 0.73
HDDC2-206ENST00000608461 KRT27Q7Z3Y8 459 aa19.62■□□□□ 0.73
HDDC2-206ENST00000608461 CARD10Q9BWT7 1032 aa19.62■□□□□ 0.73
HDDC2-206ENST00000608461 BRWD3Q6RI45 1802 aa19.62■□□□□ 0.73
HDDC2-206ENST00000608461 CCDC7Q96M83 1385 aa19.61■□□□□ 0.73
HDDC2-206ENST00000608461 ERBB3P21860 1342 aa19.61■□□□□ 0.73
HDDC2-206ENST00000608461 MAP3K19Q56UN5 1328 aa19.61■□□□□ 0.73
HDDC2-206ENST00000608461 A0A0G2JS52 829 aa19.61■□□□□ 0.73
HDDC2-206ENST00000608461 MYT1Q01538 1121 aa19.61■□□□□ 0.73
HDDC2-206ENST00000608461 CCDC125Q86Z20 511 aa19.61■□□□□ 0.73
HDDC2-206ENST00000608461 UPF1Q92900 1129 aaKnown RBP eCLIP19.61■□□□□ 0.73
HDDC2-206ENST00000608461 CDCA7Q9BWT1 371 aaPredicted RBP19.61■□□□□ 0.73
HDDC2-206ENST00000608461 USP35Q9P2H5 1018 aa19.61■□□□□ 0.73
HDDC2-206ENST00000608461 KNSTRNQ9Y448 316 aa19.61■□□□□ 0.73
HDDC2-206ENST00000608461 ANKRD26Q9UPS8 1709 aa19.6■□□□□ 0.73
HDDC2-206ENST00000608461 CSB-PGBD3P0DP91 1061 aa19.6■□□□□ 0.73
HDDC2-206ENST00000608461 ZEB1P37275 1124 aaPredicted RBP19.6■□□□□ 0.73
HDDC2-206ENST00000608461 AMPHP49418 695 aa19.6■□□□□ 0.73
HDDC2-206ENST00000608461 WASHC2AQ641Q2 1341 aa19.58■□□□□ 0.73
HDDC2-206ENST00000608461 HOXC9P31274 260 aa19.58■□□□□ 0.72
HDDC2-206ENST00000608461 FAM208AQ9UK61 1670 aaKnown RBP19.58■□□□□ 0.72
HDDC2-206ENST00000608461 ANKRD24Q8TF21 1146 aa19.57■□□□□ 0.72
HDDC2-206ENST00000608461 PARP4Q9UKK3 1724 aaKnown RBP19.56■□□□□ 0.72
HDDC2-206ENST00000608461 FLT4P35916 1363 aa19.56■□□□□ 0.72
HDDC2-206ENST00000608461 RRS1Q15050 365 aaKnown RBP19.55■□□□□ 0.72
HDDC2-206ENST00000608461 EP400Q96L91 3159 aa19.54■□□□□ 0.72
HDDC2-206ENST00000608461 PER1O15534 1290 aaPredicted RBP19.54■□□□□ 0.72
HDDC2-206ENST00000608461 FBLN1P23142 703 aa19.54■□□□□ 0.72
HDDC2-206ENST00000608461 PDE3BQ13370 1112 aa19.54■□□□□ 0.72
HDDC2-206ENST00000608461 INSRP06213 1382 aa19.54■□□□□ 0.72
HDDC2-206ENST00000608461 NLRP2Q9NX02 1062 aa19.53■□□□□ 0.72
HDDC2-206ENST00000608461 WNK3Q9BYP7 1800 aa19.53■□□□□ 0.72
HDDC2-206ENST00000608461 SMG6Q86US8 1419 aaKnown RBP19.52■□□□□ 0.72
HDDC2-206ENST00000608461 AMER1Q5JTC6 1135 aaPredicted RBP19.52■□□□□ 0.72
HDDC2-206ENST00000608461 MAP2P11137 1827 aaKnown RBP19.52■□□□□ 0.72
HDDC2-206ENST00000608461 DDB1Q16531 1140 aa19.51■□□□□ 0.71
HDDC2-206ENST00000608461 FAM196AQ6ZSG2 479 aa19.51■□□□□ 0.71
HDDC2-206ENST00000608461 NPC1L1Q9UHC9 1359 aa19.51■□□□□ 0.71
HDDC2-206ENST00000608461 DISP2A7MBM2 1401 aa19.51■□□□□ 0.71
HDDC2-206ENST00000608461 MORC1Q86VD1 984 aa19.5■□□□□ 0.71
HDDC2-206ENST00000608461 IL2RBP14784 551 aa19.49■□□□□ 0.71
HDDC2-206ENST00000608461 POLKQ9UBT6 870 aa19.49■□□□□ 0.71
HDDC2-206ENST00000608461 PEAK1Q9H792 1746 aa19.48■□□□□ 0.71
HDDC2-206ENST00000608461 EXOC5O00471 708 aa19.48■□□□□ 0.71
HDDC2-206ENST00000608461 HSP90AB2PQ58FF8 381 aa19.48■□□□□ 0.71
HDDC2-206ENST00000608461 EMILIN1Q9Y6C2 1016 aa19.48■□□□□ 0.71
HDDC2-206ENST00000608461 LRRC37A3O60309 1634 aa19.47■□□□□ 0.71
HDDC2-206ENST00000608461 SF3B2Q13435 895 aaKnown RBP19.47■□□□□ 0.71
HDDC2-206ENST00000608461 LTV1Q96GA3 475 aaPredicted RBP19.47■□□□□ 0.71
HDDC2-206ENST00000608461 BCL9O00512 1426 aa19.45■□□□□ 0.7
HDDC2-206ENST00000608461 PPM1GO15355 546 aaPredicted RBP19.45■□□□□ 0.7
HDDC2-206ENST00000608461 OVOS2A0A0G2JMS6 1433 aa19.44■□□□□ 0.7
HDDC2-206ENST00000608461 TNNT2P45379 298 aaPredicted RBP19.44■□□□□ 0.7
HDDC2-206ENST00000608461 TNS2Q63HR2 1409 aa19.43■□□□□ 0.7
HDDC2-206ENST00000608461 RGPD1P0DJD0 1748 aa19.43■□□□□ 0.7
HDDC2-206ENST00000608461 NBPF6Q5VWK0 638 aa19.43■□□□□ 0.7
HDDC2-206ENST00000608461 NBPF4Q96M43 638 aa19.43■□□□□ 0.7
HDDC2-206ENST00000608461 RGPD2P0DJD1 1756 aa19.42■□□□□ 0.7
HDDC2-206ENST00000608461 FAM182BQ5T319 152 aa19.41■□□□□ 0.7
HDDC2-206ENST00000608461 MARCH10Q8NA82 808 aaPredicted RBP19.4■□□□□ 0.7
HDDC2-206ENST00000608461 NCAPD2Q15021 1401 aa19.4■□□□□ 0.7
HDDC2-206ENST00000608461 BAG6P46379 1132 aa19.39■□□□□ 0.69
HDDC2-206ENST00000608461 RAPGEF4Q8WZA2 1011 aa19.39■□□□□ 0.69
HDDC2-206ENST00000608461 PLEKHG2Q9H7P9 1386 aa19.39■□□□□ 0.69
HDDC2-206ENST00000608461 CC2D1BQ5T0F9 858 aaKnown RBP19.38■□□□□ 0.69
HDDC2-206ENST00000608461 TRIM37O94972 964 aa19.36■□□□□ 0.69
HDDC2-206ENST00000608461 TATP17735 454 aaPredicted RBP19.36■□□□□ 0.69
HDDC2-206ENST00000608461 EIF4A2Q14240 407 aaKnown RBP19.36■□□□□ 0.69
HDDC2-206ENST00000608461 TNS1Q9HBL0 1735 aaKnown RBP19.36■□□□□ 0.69
HDDC2-206ENST00000608461 SBF2Q86WG5 1849 aa19.35■□□□□ 0.69
HDDC2-206ENST00000608461 ZCRB1Q8TBF4 217 aaKnown RBP19.35■□□□□ 0.69
HDDC2-206ENST00000608461 EYA1Q99502 592 aa19.35■□□□□ 0.69
HDDC2-206ENST00000608461 PARD3Q8TEW0 1356 aa19.34■□□□□ 0.69
HDDC2-206ENST00000608461 MTHFSP49914 203 aa19.34■□□□□ 0.69
HDDC2-206ENST00000608461 BCL11BQ9C0K0 894 aaPredicted RBP19.34■□□□□ 0.69
HDDC2-206ENST00000608461 MEGF6O75095 1541 aa19.34■□□□□ 0.69
HDDC2-206ENST00000608461 USHBP1Q8N6Y0 703 aa19.33■□□□□ 0.68
HDDC2-206ENST00000608461 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.33■□□□□ 0.683e-9■□□□□ 8.1
HDDC2-206ENST00000608461 IGSF1Q8N6C5 1336 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms