RNA–Protein interactions for RNA: ENST00000607959.5

USF2-216, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 5

Gene USF2, Length 1,920 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-216ENST00000607959 PLEKHG5O94827 1062 aa28.98■■■□□ 2.23
USF2-216ENST00000607959 FCHSD2O94868 740 aa28.96■■■□□ 2.23
USF2-216ENST00000607959 ROBO1Q9Y6N7 1651 aa28.96■■■□□ 2.23
USF2-216ENST00000607959 RTL1A6NKG5 1358 aa28.96■■■□□ 2.23
USF2-216ENST00000607959 HMOX1P09601 288 aa28.96■■■□□ 2.23
USF2-216ENST00000607959 ARHGEF25Q86VW2 580 aa28.96■■■□□ 2.23
USF2-216ENST00000607959 CDCA7LQ96GN5 454 aa28.94■■■□□ 2.22
USF2-216ENST00000607959 RRP7AQ9Y3A4 280 aaKnown RBP28.94■■■□□ 2.22
USF2-216ENST00000607959 IP6K1Q92551 441 aa28.93■■■□□ 2.22
USF2-216ENST00000607959 ARHGEF10O15013 1369 aa28.93■■■□□ 2.22
USF2-216ENST00000607959 CABLES1Q8TDN4 633 aa28.92■■■□□ 2.22
USF2-216ENST00000607959 PHF23Q9BUL5 403 aaPredicted RBP28.92■■■□□ 2.22
USF2-216ENST00000607959 PRKAR2BP31323 418 aa28.92■■■□□ 2.22
USF2-216ENST00000607959 AEBP1Q8IUX7 1158 aa28.92■■■□□ 2.22
USF2-216ENST00000607959 PDE3BQ13370 1112 aa28.9■■■□□ 2.22
USF2-216ENST00000607959 PHACTR3Q96KR7 559 aa28.89■■■□□ 2.22
USF2-216ENST00000607959 NGEFQ8N5V2 710 aa28.88■■■□□ 2.21
USF2-216ENST00000607959 NEUROD2Q15784 382 aa28.88■■■□□ 2.21
USF2-216ENST00000607959 AHDC1Q5TGY3 1603 aaPredicted RBP28.87■■■□□ 2.21
USF2-216ENST00000607959 WWC1Q8IX03 1113 aa28.87■■■□□ 2.21
USF2-216ENST00000607959 EYA1Q99502 592 aa28.87■■■□□ 2.21
USF2-216ENST00000607959 IGSF1Q8N6C5 1336 aa28.87■■■□□ 2.21
USF2-216ENST00000607959 TMPOP42166 694 aaKnown RBP28.86■■■□□ 2.21
USF2-216ENST00000607959 SULT6B1Q6IMI4 303 aa28.86■■■□□ 2.21
USF2-216ENST00000607959 ZBTB7CA1YPR0 619 aa28.86■■■□□ 2.21
USF2-216ENST00000607959 COL18A1P39060 1754 aa28.86■■■□□ 2.21
USF2-216ENST00000607959 ZC3H6P61129 1189 aaKnown RBP28.85■■■□□ 2.21
USF2-216ENST00000607959 NCBP3Q53F19 620 aaKnown RBP28.85■■■□□ 2.21
USF2-216ENST00000607959 SPINK5Q9NQ38 1064 aaPredicted RBP28.85■■■□□ 2.21
USF2-216ENST00000607959 AXIN2Q9Y2T1 843 aa28.85■■■□□ 2.21
USF2-216ENST00000607959 MAPK8IP3Q9UPT6 1336 aa28.85■■■□□ 2.21
USF2-216ENST00000607959 PNNQ9H307 717 aaKnown RBP28.84■■■□□ 2.21
USF2-216ENST00000607959 KDRP35968 1356 aa28.84■■■□□ 2.21
USF2-216ENST00000607959 ABCA3Q99758 1704 aa28.84■■■□□ 2.21
USF2-216ENST00000607959 CCDC27Q2M243 656 aa28.84■■■□□ 2.21
USF2-216ENST00000607959 RGPD5Q99666 1765 aa28.84■■■□□ 2.21
USF2-216ENST00000607959 LTV1Q96GA3 475 aaPredicted RBP28.83■■■□□ 2.21
USF2-216ENST00000607959 TRIM35Q9UPQ4 493 aa28.82■■■□□ 2.2
USF2-216ENST00000607959 RGPD2P0DJD1 1756 aa28.82■■■□□ 2.2
USF2-216ENST00000607959 GOLGA2Q08379 1002 aa28.81■■■□□ 2.2
USF2-216ENST00000607959 SLFN5Q08AF3 891 aa28.8■■■□□ 2.2
USF2-216ENST00000607959 TRMT2AQ8IZ69 625 aaKnown RBP28.8■■■□□ 2.2
USF2-216ENST00000607959 CPDO75976 1380 aa28.79■■■□□ 2.2
USF2-216ENST00000607959 GTF3C3Q9Y5Q9 886 aa28.79■■■□□ 2.2
USF2-216ENST00000607959 DUSP27Q5VZP5 1158 aa28.78■■■□□ 2.2
USF2-216ENST00000607959 KIAA0232Q92628 1395 aa28.77■■■□□ 2.2
USF2-216ENST00000607959 RIPK4P57078 832 aa28.77■■■□□ 2.2
USF2-216ENST00000607959 NFE2L2Q16236 605 aa28.77■■■□□ 2.2
USF2-216ENST00000607959 NBPF6Q5VWK0 638 aa28.77■■■□□ 2.2
USF2-216ENST00000607959 NBPF4Q96M43 638 aa28.77■■■□□ 2.2
USF2-216ENST00000607959 DLG5Q8TDM6 1919 aa28.77■■■□□ 2.2
USF2-216ENST00000607959 TOM1O60784 492 aa28.75■■■□□ 2.19
USF2-216ENST00000607959 LRRC59Q96AG4 307 aaKnown RBP28.75■■■□□ 2.19
USF2-216ENST00000607959 USHBP1Q8N6Y0 703 aa28.74■■■□□ 2.19
USF2-216ENST00000607959 ANKRD24Q8TF21 1146 aa28.74■■■□□ 2.19
USF2-216ENST00000607959 COL16A1Q07092 1604 aaPredicted RBP28.74■■■□□ 2.19
USF2-216ENST00000607959 ABCC6O95255 1503 aa28.73■■■□□ 2.19
USF2-216ENST00000607959 CAMTA1Q9Y6Y1 1673 aa28.73■■■□□ 2.19
USF2-216ENST00000607959 CHRNA2Q15822 529 aa28.73■■■□□ 2.19
USF2-216ENST00000607959 WDR63Q8IWG1 891 aa28.73■■■□□ 2.19
USF2-216ENST00000607959 SUPT16HQ9Y5B9 1047 aaKnown RBP28.73■■■□□ 2.19
USF2-216ENST00000607959 NCAPD2Q15021 1401 aa28.73■■■□□ 2.19
USF2-216ENST00000607959 PHLPP1O60346 1717 aa28.72■■■□□ 2.19
USF2-216ENST00000607959 ERBB3P21860 1342 aa28.71■■■□□ 2.19
USF2-216ENST00000607959 PIP4K2BP78356 416 aa28.71■■■□□ 2.19
USF2-216ENST00000607959 LMO7Q8WWI1 1683 aa28.71■■■□□ 2.19
USF2-216ENST00000607959 COL22A1Q8NFW1 1626 aaPredicted RBP28.7■■■□□ 2.19
USF2-216ENST00000607959 E9PSI1 815 aa28.7■■■□□ 2.18
USF2-216ENST00000607959 NEFMP07197 916 aa28.7■■■□□ 2.18
USF2-216ENST00000607959 UBAP1LF5GYI3 381 aa28.69■■■□□ 2.18
USF2-216ENST00000607959 CERKQ8TCT0 537 aa28.67■■■□□ 2.18
USF2-216ENST00000607959 MTHFSDQ2M296 383 aaKnown RBP28.66■■■□□ 2.18
USF2-216ENST00000607959 THUMPD2Q9BTF0 503 aaKnown RBP28.63■■■□□ 2.17
USF2-216ENST00000607959 PRDM11Q9NQV5 511 aa28.63■■■□□ 2.17
USF2-216ENST00000607959 FAM208AQ9UK61 1670 aaKnown RBP28.63■■■□□ 2.17
USF2-216ENST00000607959 FAM83GA6ND36 823 aa28.63■■■□□ 2.17
USF2-216ENST00000607959 RNF123Q5XPI4 1314 aa28.62■■■□□ 2.17
USF2-216ENST00000607959 HAP1P54257 671 aaPredicted RBP28.61■■■□□ 2.17
USF2-216ENST00000607959 IL16Q14005 1332 aa28.61■■■□□ 2.17
USF2-216ENST00000607959 RCAN3Q9UKA8 241 aa28.6■■■□□ 2.17
USF2-216ENST00000607959 DCTN1Q14203 1278 aa28.59■■■□□ 2.17
USF2-216ENST00000607959 COL5A2P05997 1499 aaPredicted RBP28.57■■■□□ 2.16
USF2-216ENST00000607959 TSR2Q969E8 191 aaKnown RBP28.56■■■□□ 2.16
USF2-216ENST00000607959 LMOD3Q0VAK6 560 aa28.55■■■□□ 2.16
USF2-216ENST00000607959 GAS2L2Q8NHY3 880 aa28.55■■■□□ 2.16
USF2-216ENST00000607959 NLRP2Q9NX02 1062 aa28.55■■■□□ 2.16
USF2-216ENST00000607959 FANCIQ9NVI1 1328 aa28.55■■■□□ 2.16
USF2-216ENST00000607959 ZNF853P0CG23 659 aa28.53■■■□□ 2.16
USF2-216ENST00000607959 MCM10Q7L590 875 aa28.53■■■□□ 2.16
USF2-216ENST00000607959 MYH16Q9H6N6 1097 aa28.53■■■□□ 2.16
USF2-216ENST00000607959 WDR17Q8IZU2 1322 aa28.51■■■□□ 2.16
USF2-216ENST00000607959 CSB-PGBD3P0DP91 1061 aa28.51■■■□□ 2.16
USF2-216ENST00000607959 FKBP8Q14318 412 aa28.51■■■□□ 2.15
USF2-216ENST00000607959 COL14A1Q05707 1796 aaKnown RBP28.5■■■□□ 2.15
USF2-216ENST00000607959 IRX6P78412 446 aaPredicted RBP28.5■■■□□ 2.15
USF2-216ENST00000607959 CRB1P82279 1406 aa28.5■■■□□ 2.15
USF2-216ENST00000607959 MEGF6O75095 1541 aa28.5■■■□□ 2.15
USF2-216ENST00000607959 LRRC37A3O60309 1634 aa28.49■■■□□ 2.15
USF2-216ENST00000607959 IFT57Q9NWB7 429 aa28.48■■■□□ 2.15
USF2-216ENST00000607959 MAP3K5Q99683 1374 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms