RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 BARGINQ6ZT62 677 aa19.99■□□□□ 0.79
PRDM16-210ENST00000607632 AXIN2Q9Y2T1 843 aa19.99■□□□□ 0.79
PRDM16-210ENST00000607632 KIF20BQ96Q89 1820 aa19.97■□□□□ 0.79
PRDM16-210ENST00000607632 PARP4Q9UKK3 1724 aaKnown RBP19.97■□□□□ 0.79
PRDM16-210ENST00000607632 EVA1CP58658 441 aa19.97■□□□□ 0.79
PRDM16-210ENST00000607632 THRAP3Q9Y2W1 955 aaKnown RBP19.97■□□□□ 0.79
PRDM16-210ENST00000607632 WNK3Q9BYP7 1800 aa19.97■□□□□ 0.79
PRDM16-210ENST00000607632 KRT27Q7Z3Y8 459 aa19.96■□□□□ 0.79
PRDM16-210ENST00000607632 WDR17Q8IZU2 1322 aa19.96■□□□□ 0.79
PRDM16-210ENST00000607632 TCP11L2Q8N4U5 519 aa19.95■□□□□ 0.78
PRDM16-210ENST00000607632 CARD14Q9BXL6 1004 aa19.95■□□□□ 0.78
PRDM16-210ENST00000607632 FYB1O15117 783 aa19.94■□□□□ 0.78
PRDM16-210ENST00000607632 CCDC125Q86Z20 511 aa19.94■□□□□ 0.78
PRDM16-210ENST00000607632 SOX12O15370 315 aa19.93■□□□□ 0.78
PRDM16-210ENST00000607632 COG3Q96JB2 828 aa19.92■□□□□ 0.78
PRDM16-210ENST00000607632 BLMP54132 1417 aaPredicted RBP19.92■□□□□ 0.78
PRDM16-210ENST00000607632 NSD3Q9BZ95 1437 aa19.92■□□□□ 0.78
PRDM16-210ENST00000607632 ZBTB7CA1YPR0 619 aa19.91■□□□□ 0.78
PRDM16-210ENST00000607632 ERBB3P21860 1342 aa19.9■□□□□ 0.78
PRDM16-210ENST00000607632 DISP2A7MBM2 1401 aa19.9■□□□□ 0.78
PRDM16-210ENST00000607632 LRRC37A3O60309 1634 aa19.9■□□□□ 0.78
PRDM16-210ENST00000607632 C11orf95C9JLR9 678 aaPredicted RBP19.89■□□□□ 0.77
PRDM16-210ENST00000607632 CARD10Q9BWT7 1032 aa19.89■□□□□ 0.77
PRDM16-210ENST00000607632 USP35Q9P2H5 1018 aa19.89■□□□□ 0.77
PRDM16-210ENST00000607632 FAM208AQ9UK61 1670 aaKnown RBP19.89■□□□□ 0.77
PRDM16-210ENST00000607632 A0A0G2JS52 829 aa19.88■□□□□ 0.77
PRDM16-210ENST00000607632 MYT1Q01538 1121 aa19.88■□□□□ 0.77
PRDM16-210ENST00000607632 TOM1L2Q6ZVM7 507 aa19.88■□□□□ 0.77
PRDM16-210ENST00000607632 ANKRD26Q9UPS8 1709 aa19.88■□□□□ 0.77
PRDM16-210ENST00000607632 RTL1A6NKG5 1358 aa19.87■□□□□ 0.77
PRDM16-210ENST00000607632 CCDC7Q96M83 1385 aa19.87■□□□□ 0.77
PRDM16-210ENST00000607632 MAP3K19Q56UN5 1328 aa19.87■□□□□ 0.77
PRDM16-210ENST00000607632 IP6K1Q92551 441 aa19.87■□□□□ 0.77
PRDM16-210ENST00000607632 GGNBP2Q9H3C7 697 aa19.87■□□□□ 0.77
PRDM16-210ENST00000607632 RGPD1P0DJD0 1748 aa19.87■□□□□ 0.77
PRDM16-210ENST00000607632 PEAK1Q9H792 1746 aa19.86■□□□□ 0.77
PRDM16-210ENST00000607632 TNS1Q9HBL0 1735 aaKnown RBP19.85■□□□□ 0.77
PRDM16-210ENST00000607632 KIF24Q5T7B8 1368 aa19.84■□□□□ 0.77
PRDM16-210ENST00000607632 CDCA7Q9BWT1 371 aaPredicted RBP19.84■□□□□ 0.77
PRDM16-210ENST00000607632 HOXC9P31274 260 aa19.83■□□□□ 0.77
PRDM16-210ENST00000607632 CGNL1Q0VF96 1302 aa19.82■□□□□ 0.76
PRDM16-210ENST00000607632 CSB-PGBD3P0DP91 1061 aa19.82■□□□□ 0.76
PRDM16-210ENST00000607632 FBLN1P23142 703 aa19.82■□□□□ 0.76
PRDM16-210ENST00000607632 ANKRD24Q8TF21 1146 aa19.82■□□□□ 0.76
PRDM16-210ENST00000607632 KIF7Q2M1P5 1343 aa19.81■□□□□ 0.76
PRDM16-210ENST00000607632 FAM196AQ6ZSG2 479 aa19.81■□□□□ 0.76
PRDM16-210ENST00000607632 BCL9O00512 1426 aa19.81■□□□□ 0.76
PRDM16-210ENST00000607632 PDE3BQ13370 1112 aa19.8■□□□□ 0.76
PRDM16-210ENST00000607632 FAM182BQ5T319 152 aa19.8■□□□□ 0.76
PRDM16-210ENST00000607632 POLR3GLQ9BT43 218 aa19.79■□□□□ 0.76
PRDM16-210ENST00000607632 PANK3Q9H999 370 aa19.79■□□□□ 0.76
PRDM16-210ENST00000607632 OVOS2A0A0G2JMS6 1433 aa19.78■□□□□ 0.76
PRDM16-210ENST00000607632 TNS2Q63HR2 1409 aa19.78■□□□□ 0.76
PRDM16-210ENST00000607632 RRS1Q15050 365 aaKnown RBP19.78■□□□□ 0.76
PRDM16-210ENST00000607632 DDB1Q16531 1140 aa19.78■□□□□ 0.76
PRDM16-210ENST00000607632 NSD2O96028 1365 aa19.78■□□□□ 0.76
PRDM16-210ENST00000607632 SBF2Q86WG5 1849 aa19.78■□□□□ 0.76
PRDM16-210ENST00000607632 RGPD2P0DJD1 1756 aa19.78■□□□□ 0.76
PRDM16-210ENST00000607632 AMPHP49418 695 aa19.77■□□□□ 0.76
PRDM16-210ENST00000607632 INSRP06213 1382 aa19.77■□□□□ 0.76
PRDM16-210ENST00000607632 FLT4P35916 1363 aa19.77■□□□□ 0.76
PRDM16-210ENST00000607632 MAP2P11137 1827 aaKnown RBP19.76■□□□□ 0.75
PRDM16-210ENST00000607632 NLRP2Q9NX02 1062 aa19.76■□□□□ 0.75
PRDM16-210ENST00000607632 SF3B2Q13435 895 aaKnown RBP19.75■□□□□ 0.75
PRDM16-210ENST00000607632 DEFB132Q7Z7B7 95 aa19.75■□□□□ 0.75
PRDM16-210ENST00000607632 IL2RBP14784 551 aa19.73■□□□□ 0.75
PRDM16-210ENST00000607632 MARCH10Q8NA82 808 aaPredicted RBP19.73■□□□□ 0.75
PRDM16-210ENST00000607632 NCAPD2Q15021 1401 aa19.73■□□□□ 0.75
PRDM16-210ENST00000607632 BAG6P46379 1132 aa19.72■□□□□ 0.75
PRDM16-210ENST00000607632 SRCAPQ6ZRS2 3230 aa19.72■□□□□ 0.75
PRDM16-210ENST00000607632 SMG6Q86US8 1419 aaKnown RBP19.72■□□□□ 0.75
PRDM16-210ENST00000607632 RGPD3A6NKT7 1758 aaPredicted RBP19.71■□□□□ 0.75
PRDM16-210ENST00000607632 RGPD4Q7Z3J3 1758 aa19.71■□□□□ 0.75
PRDM16-210ENST00000607632 EXOC5O00471 708 aa19.71■□□□□ 0.75
PRDM16-210ENST00000607632 HSP90AB2PQ58FF8 381 aa19.71■□□□□ 0.75
PRDM16-210ENST00000607632 EMILIN1Q9Y6C2 1016 aa19.71■□□□□ 0.75
PRDM16-210ENST00000607632 WASHC2AQ641Q2 1341 aa19.71■□□□□ 0.75
PRDM16-210ENST00000607632 SHANK3Q9BYB0 1731 aa19.71■□□□□ 0.75
PRDM16-210ENST00000607632 PER1O15534 1290 aaPredicted RBP19.7■□□□□ 0.74
PRDM16-210ENST00000607632 TRIM37O94972 964 aa19.7■□□□□ 0.74
PRDM16-210ENST00000607632 AMER1Q5JTC6 1135 aaPredicted RBP19.7■□□□□ 0.74
PRDM16-210ENST00000607632 LTV1Q96GA3 475 aaPredicted RBP19.7■□□□□ 0.74
PRDM16-210ENST00000607632 POLKQ9UBT6 870 aa19.7■□□□□ 0.74
PRDM16-210ENST00000607632 RREB1Q92766 1687 aa19.7■□□□□ 0.74
PRDM16-210ENST00000607632 PARD3Q8TEW0 1356 aa19.7■□□□□ 0.74
PRDM16-210ENST00000607632 MEGF6O75095 1541 aa19.68■□□□□ 0.74
PRDM16-210ENST00000607632 NBPF6Q5VWK0 638 aa19.68■□□□□ 0.74
PRDM16-210ENST00000607632 NBPF4Q96M43 638 aa19.68■□□□□ 0.74
PRDM16-210ENST00000607632 CAMKK2Q96RR4 588 aa19.67■□□□□ 0.74
PRDM16-210ENST00000607632 KNSTRNQ9Y448 316 aa19.67■□□□□ 0.74
PRDM16-210ENST00000607632 NHSQ6T4R5 1651 aa19.67■□□□□ 0.74
PRDM16-210ENST00000607632 EN1Q05925 392 aaPredicted RBP19.66■□□□□ 0.74
PRDM16-210ENST00000607632 NPC1L1Q9UHC9 1359 aa19.66■□□□□ 0.74
PRDM16-210ENST00000607632 BCL11BQ9C0K0 894 aaPredicted RBP19.64■□□□□ 0.73
PRDM16-210ENST00000607632 NUP188Q5SRE5 1749 aa19.64■□□□□ 0.73
PRDM16-210ENST00000607632 APBA3O96018 575 aa19.63■□□□□ 0.73
PRDM16-210ENST00000607632 PKD1L3Q7Z443 1732 aa19.62■□□□□ 0.73
PRDM16-210ENST00000607632 PLSCR1O15162 318 aa19.62■□□□□ 0.73
PRDM16-210ENST00000607632 EZH2Q15910 746 aaKnown RBP19.62■□□□□ 0.73
PRDM16-210ENST00000607632 PLEKHG2Q9H7P9 1386 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms