RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 TTLL8A6PVC2 850 aa6.16□□□□□ -1.42
HMGB1P50-201ENST00000605814 LILRB3O75022 631 aa6.16□□□□□ -1.42
HMGB1P50-201ENST00000605814 TUSC1Q2TAM9 212 aa6.16□□□□□ -1.42
HMGB1P50-201ENST00000605814 ZBTB33Q86T24 672 aa6.16□□□□□ -1.42
HMGB1P50-201ENST00000605814 ARHGAP9Q9BRR9 750 aa6.16□□□□□ -1.42
HMGB1P50-201ENST00000605814 POLR3EQ9NVU0 708 aa6.16□□□□□ -1.42
HMGB1P50-201ENST00000605814 DNMT3LQ9UJW3 386 aa6.16□□□□□ -1.42
HMGB1P50-201ENST00000605814 SH3BP5LQ7L8J4 393 aa6.15□□□□□ -1.42
HMGB1P50-201ENST00000605814 TRMT44Q8IYL2 757 aaKnown RBP6.15□□□□□ -1.42
HMGB1P50-201ENST00000605814 C1QTNF2Q9BXJ5 285 aa6.15□□□□□ -1.42
HMGB1P50-201ENST00000605814 CDV3Q9UKY7 258 aaKnown RBP6.15□□□□□ -1.42
HMGB1P50-201ENST00000605814 SOS2Q07890 1332 aaPredicted RBP6.15□□□□□ -1.43
HMGB1P50-201ENST00000605814 FIGNL2A6NMB9 653 aa6.14□□□□□ -1.43
HMGB1P50-201ENST00000605814 RNF225M0QZC1 329 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P50-201ENST00000605814 DHX9Q08211 1270 aaKnown RBP6.14□□□□□ -1.43
HMGB1P50-201ENST00000605814 RTL5Q5HYW3 569 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P50-201ENST00000605814 SH3RF1Q7Z6J0 888 aa6.14□□□□□ -1.43
HMGB1P50-201ENST00000605814 PNMA1Q8ND90 353 aa6.14□□□□□ -1.43
HMGB1P50-201ENST00000605814 SLC24A3Q9HC58 644 aa6.14□□□□□ -1.43
HMGB1P50-201ENST00000605814 LORP23490 312 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P50-201ENST00000605814 ERFEQ4G0M1 354 aa6.13□□□□□ -1.43
HMGB1P50-201ENST00000605814 PPP1R26Q5T8A7 1209 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P50-201ENST00000605814 CLSPNQ9HAW4 1339 aa6.13□□□□□ -1.43
HMGB1P50-201ENST00000605814 CDC14CA4D256 554 aa6.12□□□□□ -1.43
HMGB1P50-201ENST00000605814 PTSQ03393 145 aa6.12□□□□□ -1.43
HMGB1P50-201ENST00000605814 CNTNAP3BQ96NU0 1288 aa6.12□□□□□ -1.43
HMGB1P50-201ENST00000605814 KCTD15Q96SI1 283 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P50-201ENST00000605814 CNTNAP3Q9BZ76 1288 aa6.12□□□□□ -1.43
HMGB1P50-201ENST00000605814 RAB15P59190 212 aa6.11□□□□□ -1.43
HMGB1P50-201ENST00000605814 CBLBQ13191 982 aa6.11□□□□□ -1.43
HMGB1P50-201ENST00000605814 PDXDC2PQ6P474 469 aa6.11□□□□□ -1.43
HMGB1P50-201ENST00000605814 SVOPQ8N4V2 548 aa6.11□□□□□ -1.43
HMGB1P50-201ENST00000605814 POLMQ9NP87 494 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P50-201ENST00000605814 FKBPLQ9UIM3 349 aa6.11□□□□□ -1.43
HMGB1P50-201ENST00000605814 RELBQ01201 579 aa6.1□□□□□ -1.43
HMGB1P50-201ENST00000605814 PTK2Q05397 1052 aa6.1□□□□□ -1.43
HMGB1P50-201ENST00000605814 CTDSPL2Q05D32 466 aa6.1□□□□□ -1.43
HMGB1P50-201ENST00000605814 NBPF20Q3BBV1 942 aa6.1□□□□□ -1.43
HMGB1P50-201ENST00000605814 BCL11AQ9H165 835 aa6.1□□□□□ -1.43
HMGB1P50-201ENST00000605814 ZC3H4Q9UPT8 1303 aaKnown RBP6.09□□□□□ -1.43
HMGB1P50-201ENST00000605814 LOC105371045A0A1W2PR82 267 aa6.09□□□□□ -1.43
HMGB1P50-201ENST00000605814 CCDC155Q8N6L0 562 aa6.09□□□□□ -1.43
HMGB1P50-201ENST00000605814 TRIM52Q96A61 297 aa6.09□□□□□ -1.43
HMGB1P50-201ENST00000605814 SPINT1O43278 529 aa6.08□□□□□ -1.44
HMGB1P50-201ENST00000605814 AP1G2O75843 785 aa6.08□□□□□ -1.44
HMGB1P50-201ENST00000605814 NR6A1Q15406 480 aa6.08□□□□□ -1.44
HMGB1P50-201ENST00000605814 DIEXFQ68CQ4 756 aaKnown RBP6.08□□□□□ -1.44
HMGB1P50-201ENST00000605814 LRRN4Q8WUT4 740 aa6.08□□□□□ -1.44
HMGB1P50-201ENST00000605814 AGBL1Q96MI9 1066 aa6.08□□□□□ -1.44
HMGB1P50-201ENST00000605814 ANP32EQ9BTT0 268 aa6.08□□□□□ -1.44
HMGB1P50-201ENST00000605814 COL25A1Q9BXS0 654 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P50-201ENST00000605814 KCNMA1Q12791 1236 aa6.07□□□□□ -1.44
HMGB1P50-201ENST00000605814 Q6ZVU0 165 aa6.07□□□□□ -1.44
HMGB1P50-201ENST00000605814 SV2AQ7L0J3 742 aa6.07□□□□□ -1.44
HMGB1P50-201ENST00000605814 ERICH6Q7L0X2 663 aa6.07□□□□□ -1.44
HMGB1P50-201ENST00000605814 DZIP3Q86Y13 1208 aaKnown RBP6.07□□□□□ -1.44
HMGB1P50-201ENST00000605814 TMEM151AQ8N4L1 468 aa6.07□□□□□ -1.44
HMGB1P50-201ENST00000605814 INSM2Q96T92 566 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P50-201ENST00000605814 GDF11O95390 407 aa6.06□□□□□ -1.44
HMGB1P50-201ENST00000605814 ITGA6P23229 1130 aa6.06□□□□□ -1.44
HMGB1P50-201ENST00000605814 MARSP56192 900 aaKnown RBP6.06□□□□□ -1.44
HMGB1P50-201ENST00000605814 INTS6LQ5JSJ4 861 aaKnown RBP6.06□□□□□ -1.44
HMGB1P50-201ENST00000605814 KCTD17Q8N5Z5 321 aa6.06□□□□□ -1.44
HMGB1P50-201ENST00000605814 ZNF395Q9H8N7 513 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P50-201ENST00000605814 ZCCHC6Q5VYS8 1495 aaKnown RBP6.06□□□□□ -1.44
HMGB1P50-201ENST00000605814 SHROOM4Q9ULL8 1493 aa6.06□□□□□ -1.44
HMGB1P50-201ENST00000605814 CTSOP43234 321 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P50-201ENST00000605814 MAP3K10Q02779 954 aa6.05□□□□□ -1.44
HMGB1P50-201ENST00000605814 SKIV2LQ15477 1246 aaKnown RBP6.05□□□□□ -1.44
HMGB1P50-201ENST00000605814 VWA5B2Q8N398 1253 aa6.05□□□□□ -1.44
HMGB1P50-201ENST00000605814 GPR161Q8N6U8 529 aaKnown RBP6.05□□□□□ -1.44
HMGB1P50-201ENST00000605814 ADAM32Q8TC27 787 aa6.05□□□□□ -1.44
HMGB1P50-201ENST00000605814 DDRGK1Q96HY6 314 aa6.05□□□□□ -1.44
HMGB1P50-201ENST00000605814 ADAMTS8Q9UP79 889 aa6.05□□□□□ -1.44
HMGB1P50-201ENST00000605814 KRT76Q01546 638 aa6.04□□□□□ -1.44
HMGB1P50-201ENST00000605814 NANOS1Q8WY41 292 aaKnown RBP6.04□□□□□ -1.44
HMGB1P50-201ENST00000605814 GPSM3Q9Y4H4 160 aa6.04□□□□□ -1.44
HMGB1P50-201ENST00000605814 SLC35F4A4IF30 521 aa6.03□□□□□ -1.44
HMGB1P50-201ENST00000605814 ADH1AP07327 375 aa6.03□□□□□ -1.44
HMGB1P50-201ENST00000605814 RASSF7Q02833 373 aa6.03□□□□□ -1.44
HMGB1P50-201ENST00000605814 SH3D19Q5HYK7 790 aa6.03□□□□□ -1.44
HMGB1P50-201ENST00000605814 ZNF784Q8NCA9 323 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P50-201ENST00000605814 TMPRSS4Q9NRS4 437 aa6.03□□□□□ -1.44
HMGB1P50-201ENST00000605814 FAM9AQ8IZU1 332 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P50-201ENST00000605814 RNF217Q8TC41 542 aa6.02□□□□□ -1.45
HMGB1P50-201ENST00000605814 USP17L8P0C7I0 530 aa6.01□□□□□ -1.45
HMGB1P50-201ENST00000605814 IRS1P35568 1242 aa6.01□□□□□ -1.45
HMGB1P50-201ENST00000605814 RNFT1Q5M7Z0 435 aa6.01□□□□□ -1.45
HMGB1P50-201ENST00000605814 ZNF385CQ66K41 422 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P50-201ENST00000605814 FOXR1Q6PIV2 292 aa6.01□□□□□ -1.45
HMGB1P50-201ENST00000605814 LYSMD3Q7Z3D4 306 aa6.01□□□□□ -1.45
HMGB1P50-201ENST00000605814 PROCA1Q8NCQ7 364 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P50-201ENST00000605814 KDM4CQ9H3R0 1056 aa6.01□□□□□ -1.45
HMGB1P50-201ENST00000605814 ENAMQ9NRM1 1142 aa6.01□□□□□ -1.45
HMGB1P50-201ENST00000605814 ERVH48-1M5A8F1 160 aa6□□□□□ -1.45
HMGB1P50-201ENST00000605814 SCARF2Q96GP6 870 aaPredicted RBP6□□□□□ -1.45
HMGB1P50-201ENST00000605814 ESF1Q9H501 851 aaKnown RBP6□□□□□ -1.45
HMGB1P50-201ENST00000605814 GPBP1L1Q9HC44 474 aaPredicted RBP6□□□□□ -1.45
HMGB1P50-201ENST00000605814 CYLDQ9NQC7 956 aa6□□□□□ -1.45
HMGB1P50-201ENST00000605814 ADAMTS2O95450 1211 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms