RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 FBXO31Q5XUX0 539 aaPredicted RBP8.87□□□□□ -0.99
LSM1P2-201ENST00000604911 MAGEB6P1A0A0J9YX57 407 aa8.86□□□□□ -0.99
LSM1P2-201ENST00000604911 MAN1A2O60476 641 aa8.86□□□□□ -0.99
LSM1P2-201ENST00000604911 BMP2P12643 396 aa8.86□□□□□ -0.99
LSM1P2-201ENST00000604911 EMILIN1Q9Y6C2 1016 aa8.86□□□□□ -0.99
LSM1P2-201ENST00000604911 CCDC116Q8IYX3 515 aa8.85□□□□□ -0.99
LSM1P2-201ENST00000604911 DNMT3LQ9UJW3 386 aa8.85□□□□□ -0.99
LSM1P2-201ENST00000604911 PPFIA3O75145 1194 aa8.84□□□□□ -0.99
LSM1P2-201ENST00000604911 UPP2O95045 317 aa8.84□□□□□ -0.99
LSM1P2-201ENST00000604911 PDXDC2PQ6P474 469 aa8.84□□□□□ -0.99
LSM1P2-201ENST00000604911 TSEN34Q9BSV6 310 aaKnown RBP8.84□□□□□ -0.99
LSM1P2-201ENST00000604911 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.84□□□□□ -0.99
LSM1P2-201ENST00000604911 CARD14Q9BXL6 1004 aa8.84□□□□□ -0.99
LSM1P2-201ENST00000604911 SKIV2LQ15477 1246 aaKnown RBP8.83□□□□□ -1
LSM1P2-201ENST00000604911 LRRN4Q8WUT4 740 aa8.83□□□□□ -1
LSM1P2-201ENST00000604911 FKBPLQ9UIM3 349 aa8.83□□□□□ -1
LSM1P2-201ENST00000604911 SH3D19Q5HYK7 790 aa8.82□□□□□ -1
LSM1P2-201ENST00000604911 PPP2R2DQ66LE6 453 aa8.82□□□□□ -1
LSM1P2-201ENST00000604911 Q6ZVU0 165 aa8.82□□□□□ -1
LSM1P2-201ENST00000604911 OCSTAMPQ9BR26 566 aa8.82□□□□□ -1
LSM1P2-201ENST00000604911 PPP1R26Q5T8A7 1209 aaPredicted RBP8.81□□□□□ -1
LSM1P2-201ENST00000604911 ZC3H4Q9UPT8 1303 aaKnown RBP8.8□□□□□ -1
LSM1P2-201ENST00000604911 PROCA1Q8NCQ7 364 aaPredicted RBP8.8□□□□□ -1
LSM1P2-201ENST00000604911 ARHGAP9Q9BRR9 750 aa8.8□□□□□ -1
LSM1P2-201ENST00000604911 NR6A1Q15406 480 aa8.79□□□□□ -1
LSM1P2-201ENST00000604911 CDV3Q9UKY7 258 aaKnown RBP8.79□□□□□ -1
LSM1P2-201ENST00000604911 TTLL8A6PVC2 850 aa8.78□□□□□ -1
LSM1P2-201ENST00000604911 SPINT1O43278 529 aa8.78□□□□□ -1
LSM1P2-201ENST00000604911 NEFLP07196 543 aa8.78□□□□□ -1
LSM1P2-201ENST00000604911 CBLBQ13191 982 aa8.78□□□□□ -1
LSM1P2-201ENST00000604911 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.78□□□□□ -1
LSM1P2-201ENST00000604911 KCTD15Q96SI1 283 aaPredicted RBP8.78□□□□□ -1
LSM1P2-201ENST00000604911 FAM117AQ9C073 453 aa8.78□□□□□ -1
LSM1P2-201ENST00000604911 KDM4CQ9H3R0 1056 aa8.78□□□□□ -1
LSM1P2-201ENST00000604911 GPBP1L1Q9HC44 474 aaPredicted RBP8.78□□□□□ -1
LSM1P2-201ENST00000604911 PGPEP1Q9NXJ5 209 aa8.78□□□□□ -1
LSM1P2-201ENST00000604911 NPM2Q86SE8 214 aaKnown RBP8.77□□□□□ -1.01
LSM1P2-201ENST00000604911 SLC10A4Q96EP9 437 aa8.77□□□□□ -1.01
LSM1P2-201ENST00000604911 BCANQ96GW7 911 aa8.77□□□□□ -1.01
LSM1P2-201ENST00000604911 GPSM3Q9Y4H4 160 aa8.77□□□□□ -1.01
LSM1P2-201ENST00000604911 PDIA4P13667 645 aaKnown RBP8.76□□□□□ -1.01
LSM1P2-201ENST00000604911 DDRGK1Q96HY6 314 aa8.76□□□□□ -1.01
LSM1P2-201ENST00000604911 KRT76Q01546 638 aa8.75□□□□□ -1.01
LSM1P2-201ENST00000604911 PTSQ03393 145 aa8.75□□□□□ -1.01
LSM1P2-201ENST00000604911 INTS6LQ5JSJ4 861 aaKnown RBP8.75□□□□□ -1.01
LSM1P2-201ENST00000604911 ZBTB33Q86T24 672 aa8.75□□□□□ -1.01
LSM1P2-201ENST00000604911 GPR161Q8N6U8 529 aaKnown RBP8.75□□□□□ -1.01
LSM1P2-201ENST00000604911 PTK2Q05397 1052 aa8.74□□□□□ -1.01
LSM1P2-201ENST00000604911 DHX9Q08211 1270 aaKnown RBP8.74□□□□□ -1.01
LSM1P2-201ENST00000604911 ADAM32Q8TC27 787 aa8.73□□□□□ -1.01
LSM1P2-201ENST00000604911 EPS8L1Q8TE68 723 aa8.73□□□□□ -1.01
LSM1P2-201ENST00000604911 NANOS1Q8WY41 292 aaKnown RBP8.73□□□□□ -1.01
LSM1P2-201ENST00000604911 HMX1Q9NP08 348 aaPredicted RBP8.73□□□□□ -1.01
LSM1P2-201ENST00000604911 FIGNL2A6NMB9 653 aa8.72□□□□□ -1.01
LSM1P2-201ENST00000604911 SLC35F4A4IF30 521 aa8.71□□□□□ -1.02
LSM1P2-201ENST00000604911 AP1G2O75843 785 aa8.71□□□□□ -1.02
LSM1P2-201ENST00000604911 CCDC155Q8N6L0 562 aa8.71□□□□□ -1.02
LSM1P2-201ENST00000604911 PKNOX2Q96KN3 472 aa8.71□□□□□ -1.02
LSM1P2-201ENST00000604911 USP17L8P0C7I0 530 aa8.7□□□□□ -1.02
LSM1P2-201ENST00000604911 CTSOP43234 321 aaPredicted RBP8.7□□□□□ -1.02
LSM1P2-201ENST00000604911 AGBL1Q96MI9 1066 aa8.7□□□□□ -1.02
LSM1P2-201ENST00000604911 ANP32EQ9BTT0 268 aa8.7□□□□□ -1.02
LSM1P2-201ENST00000604911 GSK3AP49840 483 aa8.69□□□□□ -1.02
LSM1P2-201ENST00000604911 NBPF20Q3BBV1 942 aa8.69□□□□□ -1.02
LSM1P2-201ENST00000604911 ESPNB1AK53 854 aa8.68□□□□□ -1.02
LSM1P2-201ENST00000604911 LILRA1O75019 489 aa8.68□□□□□ -1.02
LSM1P2-201ENST00000604911 KDF1Q8NAX2 398 aaPredicted RBP8.68□□□□□ -1.02
LSM1P2-201ENST00000604911 ZNF784Q8NCA9 323 aaPredicted RBP8.68□□□□□ -1.02
LSM1P2-201ENST00000604911 INSM2Q96T92 566 aaPredicted RBP8.68□□□□□ -1.02
LSM1P2-201ENST00000604911 TMPRSS4Q9NRS4 437 aa8.68□□□□□ -1.02
LSM1P2-201ENST00000604911 RFC5P40937 340 aa8.67□□□□□ -1.02
LSM1P2-201ENST00000604911 RELBQ01201 579 aa8.67□□□□□ -1.02
LSM1P2-201ENST00000604911 KCNMA1Q12791 1236 aa8.67□□□□□ -1.02
LSM1P2-201ENST00000604911 RNF217Q8TC41 542 aa8.67□□□□□ -1.02
LSM1P2-201ENST00000604911 CNTNAP3BQ96NU0 1288 aa8.67□□□□□ -1.02
LSM1P2-201ENST00000604911 CNTNAP3Q9BZ76 1288 aa8.67□□□□□ -1.02
LSM1P2-201ENST00000604911 GTF3C3Q9Y5Q9 886 aa8.67□□□□□ -1.02
LSM1P2-201ENST00000604911 ITGA6P23229 1130 aa8.66□□□□□ -1.02
LSM1P2-201ENST00000604911 ADD1P35611 737 aaKnown RBP8.66□□□□□ -1.02
LSM1P2-201ENST00000604911 RNFT1Q5M7Z0 435 aa8.66□□□□□ -1.02
LSM1P2-201ENST00000604911 COL25A1Q9BXS0 654 aaPredicted RBP8.66□□□□□ -1.02
LSM1P2-201ENST00000604911 TRIM34Q9BYJ4 488 aa8.66□□□□□ -1.02
LSM1P2-201ENST00000604911 SENP3-EIF4A1A0A087X0R7 540 aa8.65□□□□□ -1.02
LSM1P2-201ENST00000604911 ERVH48-1M5A8F1 160 aa8.65□□□□□ -1.02
LSM1P2-201ENST00000604911 ADH1AP07327 375 aa8.65□□□□□ -1.02
LSM1P2-201ENST00000604911 PDE4CQ08493 712 aa8.65□□□□□ -1.02
LSM1P2-201ENST00000604911 PNMA1Q8ND90 353 aa8.65□□□□□ -1.02
LSM1P2-201ENST00000604911 GOPCQ9HD26 462 aa8.65□□□□□ -1.02
LSM1P2-201ENST00000604911 TPRNQ4KMQ1 711 aa8.64□□□□□ -1.03
LSM1P2-201ENST00000604911 FOXD4L5Q5VV16 416 aaPredicted RBP8.64□□□□□ -1.03
LSM1P2-201ENST00000604911 DZIP3Q86Y13 1208 aaKnown RBP8.64□□□□□ -1.03
LSM1P2-201ENST00000604911 ZNF395Q9H8N7 513 aaPredicted RBP8.64□□□□□ -1.03
LSM1P2-201ENST00000604911 POLMQ9NP87 494 aaPredicted RBP8.63□□□□□ -1.03
LSM1P2-201ENST00000604911 ATP1B4Q9UN42 357 aaPredicted RBP8.63□□□□□ -1.03
LSM1P2-201ENST00000604911 SLURP2P0DP57 97 aa8.62□□□□□ -1.03
LSM1P2-201ENST00000604911 PTGIRP43119 386 aa8.62□□□□□ -1.03
LSM1P2-201ENST00000604911 TAF7LQ5H9L4 462 aa8.62□□□□□ -1.03
LSM1P2-201ENST00000604911 ZNF385CQ66K41 422 aaPredicted RBP8.62□□□□□ -1.03
LSM1P2-201ENST00000604911 C14orf37Q86TY3 774 aa8.62□□□□□ -1.03
LSM1P2-201ENST00000604911 SEPT12Q8IYM1 358 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms