RNA–Protein interactions for RNA: ENST00000603907.1

GRAMD1A-214, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-214ENST00000603907 PANK3Q9H999 370 aa28.67■■■□□ 2.18
GRAMD1A-214ENST00000603907 ZC3H6P61129 1189 aaKnown RBP28.66■■■□□ 2.18
GRAMD1A-214ENST00000603907 CAMKK2Q96RR4 588 aa28.66■■■□□ 2.18
GRAMD1A-214ENST00000603907 APBA3O96018 575 aa28.65■■■□□ 2.18
GRAMD1A-214ENST00000603907 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.65■■■□□ 2.18
GRAMD1A-214ENST00000603907 CARD14Q9BXL6 1004 aa28.65■■■□□ 2.18
GRAMD1A-214ENST00000603907 EVA1CP58658 441 aa28.64■■■□□ 2.18
GRAMD1A-214ENST00000603907 USP31Q70CQ4 1352 aa28.63■■■□□ 2.17
GRAMD1A-214ENST00000603907 NSD3Q9BZ95 1437 aa28.63■■■□□ 2.17
GRAMD1A-214ENST00000603907 PDE3BQ13370 1112 aa28.63■■■□□ 2.17
GRAMD1A-214ENST00000603907 USP35Q9P2H5 1018 aa28.63■■■□□ 2.17
GRAMD1A-214ENST00000603907 PIK3C2AO00443 1686 aa28.63■■■□□ 2.17
GRAMD1A-214ENST00000603907 NLRP6P59044 892 aa28.62■■■□□ 2.17
GRAMD1A-214ENST00000603907 NUTM2GQ5VZR2 741 aa28.62■■■□□ 2.17
GRAMD1A-214ENST00000603907 BARGINQ6ZT62 677 aa28.62■■■□□ 2.17
GRAMD1A-214ENST00000603907 USP19O94966 1318 aa28.62■■■□□ 2.17
GRAMD1A-214ENST00000603907 RREB1Q92766 1687 aa28.6■■■□□ 2.17
GRAMD1A-214ENST00000603907 USP54Q70EL1 1684 aa28.59■■■□□ 2.17
GRAMD1A-214ENST00000603907 NME9Q86XW9 330 aa28.59■■■□□ 2.17
GRAMD1A-214ENST00000603907 CGNL1Q0VF96 1302 aa28.59■■■□□ 2.17
GRAMD1A-214ENST00000603907 ZNF316A6NFI3 1004 aaPredicted RBP28.56■■■□□ 2.16
GRAMD1A-214ENST00000603907 FYB1O15117 783 aa28.56■■■□□ 2.16
GRAMD1A-214ENST00000603907 NUP188Q5SRE5 1749 aa28.56■■■□□ 2.16
GRAMD1A-214ENST00000603907 NBPF14Q5TI25 921 aa28.56■■■□□ 2.16
GRAMD1A-214ENST00000603907 KNSTRNQ9Y448 316 aa28.56■■■□□ 2.16
GRAMD1A-214ENST00000603907 SLIT3O75094 1523 aa28.55■■■□□ 2.16
GRAMD1A-214ENST00000603907 OVOS2A0A0J9YW53 1432 aa28.55■■■□□ 2.16
GRAMD1A-214ENST00000603907 OVOS2Q6IE36 1432 aa28.55■■■□□ 2.16
GRAMD1A-214ENST00000603907 TCP11L2Q8N4U5 519 aa28.55■■■□□ 2.16
GRAMD1A-214ENST00000603907 CAMTA1Q9Y6Y1 1673 aa28.54■■■□□ 2.16
GRAMD1A-214ENST00000603907 CPDO75976 1380 aa28.54■■■□□ 2.16
GRAMD1A-214ENST00000603907 KCNH5Q8NCM2 988 aa28.54■■■□□ 2.16
GRAMD1A-214ENST00000603907 COG3Q96JB2 828 aa28.54■■■□□ 2.16
GRAMD1A-214ENST00000603907 LMO7Q8WWI1 1683 aa28.54■■■□□ 2.16
GRAMD1A-214ENST00000603907 NSD2O96028 1365 aa28.53■■■□□ 2.16
GRAMD1A-214ENST00000603907 GCP02774 474 aa28.53■■■□□ 2.16
GRAMD1A-214ENST00000603907 LARP1Q6PKG0 1096 aaKnown RBP28.53■■■□□ 2.16
GRAMD1A-214ENST00000603907 PER1O15534 1290 aaPredicted RBP28.52■■■□□ 2.16
GRAMD1A-214ENST00000603907 THRAP3Q9Y2W1 955 aaKnown RBP28.52■■■□□ 2.16
GRAMD1A-214ENST00000603907 KIF20BQ96Q89 1820 aa28.51■■■□□ 2.15
GRAMD1A-214ENST00000603907 PARP4Q9UKK3 1724 aaKnown RBP28.49■■■□□ 2.15
GRAMD1A-214ENST00000603907 GGNBP2Q9H3C7 697 aa28.49■■■□□ 2.15
GRAMD1A-214ENST00000603907 NPC1L1Q9UHC9 1359 aa28.47■■■□□ 2.15
GRAMD1A-214ENST00000603907 AMER1Q5JTC6 1135 aaPredicted RBP28.46■■■□□ 2.15
GRAMD1A-214ENST00000603907 PPP1R1BQ9UD71 204 aaPredicted RBP28.44■■■□□ 2.14
GRAMD1A-214ENST00000603907 COL5A2P05997 1499 aaPredicted RBP28.44■■■□□ 2.14
GRAMD1A-214ENST00000603907 NFAT5O94916 1531 aa28.43■■■□□ 2.14
GRAMD1A-214ENST00000603907 SPON1Q9HCB6 807 aa28.43■■■□□ 2.14
GRAMD1A-214ENST00000603907 CRB1P82279 1406 aa28.42■■■□□ 2.14
GRAMD1A-214ENST00000603907 ANKRD26Q9UPS8 1709 aa28.41■■■□□ 2.14
GRAMD1A-214ENST00000603907 YY1P25490 414 aa28.41■■■□□ 2.14
GRAMD1A-214ENST00000603907 DDX10Q13206 875 aaKnown RBP28.41■■■□□ 2.14
GRAMD1A-214ENST00000603907 OVOS2A0A0G2JMS6 1433 aa28.41■■■□□ 2.14
GRAMD1A-214ENST00000603907 DCAF8L1A6NGE4 600 aa28.4■■■□□ 2.14
GRAMD1A-214ENST00000603907 ARHGEF25Q86VW2 580 aa28.4■■■□□ 2.14
GRAMD1A-214ENST00000603907 RGPD3A6NKT7 1758 aaPredicted RBP28.39■■■□□ 2.14
GRAMD1A-214ENST00000603907 RGPD4Q7Z3J3 1758 aa28.39■■■□□ 2.14
GRAMD1A-214ENST00000603907 KCNQ2O43526 872 aa28.38■■■□□ 2.13
GRAMD1A-214ENST00000603907 ZBTB7CA1YPR0 619 aa28.37■■■□□ 2.13
GRAMD1A-214ENST00000603907 SOX12O15370 315 aa28.37■■■□□ 2.13
GRAMD1A-214ENST00000603907 PEAK1Q9H792 1746 aa28.37■■■□□ 2.13
GRAMD1A-214ENST00000603907 ABCC6O95255 1503 aa28.37■■■□□ 2.13
GRAMD1A-214ENST00000603907 AATKQ6ZMQ8 1374 aa28.37■■■□□ 2.13
GRAMD1A-214ENST00000603907 MORC1Q86VD1 984 aa28.36■■■□□ 2.13
GRAMD1A-214ENST00000603907 SBF2Q86WG5 1849 aa28.36■■■□□ 2.13
GRAMD1A-214ENST00000603907 LRRC37A3O60309 1634 aa28.35■■■□□ 2.13
GRAMD1A-214ENST00000603907 PLSCR1O15162 318 aa28.33■■■□□ 2.13
GRAMD1A-214ENST00000603907 DDB1Q16531 1140 aa28.33■■■□□ 2.13
GRAMD1A-214ENST00000603907 KIF24Q5T7B8 1368 aa28.32■■■□□ 2.12
GRAMD1A-214ENST00000603907 CC2D1BQ5T0F9 858 aaKnown RBP28.31■■■□□ 2.12
GRAMD1A-214ENST00000603907 TOM1L2Q6ZVM7 507 aa28.31■■■□□ 2.12
GRAMD1A-214ENST00000603907 RTL1A6NKG5 1358 aa28.3■■■□□ 2.12
GRAMD1A-214ENST00000603907 WNK3Q9BYP7 1800 aa28.29■■■□□ 2.12
GRAMD1A-214ENST00000603907 MAP3K19Q56UN5 1328 aa28.29■■■□□ 2.12
GRAMD1A-214ENST00000603907 LTN1O94822 1766 aa28.28■■■□□ 2.12
GRAMD1A-214ENST00000603907 COL18A1P39060 1754 aa28.27■■■□□ 2.12
GRAMD1A-214ENST00000603907 BCL11BQ9C0K0 894 aaPredicted RBP28.27■■■□□ 2.12
GRAMD1A-214ENST00000603907 AMPHP49418 695 aa28.26■■■□□ 2.11
GRAMD1A-214ENST00000603907 IP6K1Q92551 441 aa28.26■■■□□ 2.11
GRAMD1A-214ENST00000603907 CDCA7Q9BWT1 371 aaPredicted RBP28.26■■■□□ 2.11
GRAMD1A-214ENST00000603907 WDR17Q8IZU2 1322 aa28.25■■■□□ 2.11
GRAMD1A-214ENST00000603907 CASZ1Q86V15 1759 aa28.25■■■□□ 2.11
GRAMD1A-214ENST00000603907 FBLN1P23142 703 aa28.25■■■□□ 2.11
GRAMD1A-214ENST00000603907 RRS1Q15050 365 aaKnown RBP28.25■■■□□ 2.11
GRAMD1A-214ENST00000603907 TNNT2P45379 298 aaPredicted RBP28.23■■■□□ 2.11
GRAMD1A-214ENST00000603907 ANO8Q9HCE9 1232 aaPredicted RBP28.23■■■□□ 2.11
GRAMD1A-214ENST00000603907 POLKQ9UBT6 870 aa28.23■■■□□ 2.11
GRAMD1A-214ENST00000603907 FLT4P35916 1363 aa28.23■■■□□ 2.11
GRAMD1A-214ENST00000603907 HOXC9P31274 260 aa28.22■■■□□ 2.11
GRAMD1A-214ENST00000603907 SMG6Q86US8 1419 aaKnown RBP28.22■■■□□ 2.11
GRAMD1A-214ENST00000603907 AXIN2Q9Y2T1 843 aa28.22■■■□□ 2.11
GRAMD1A-214ENST00000603907 BCL9O00512 1426 aa28.21■■■□□ 2.11
GRAMD1A-214ENST00000603907 MAP2P11137 1827 aaKnown RBP28.21■■■□□ 2.11
GRAMD1A-214ENST00000603907 EMILIN1Q9Y6C2 1016 aa28.2■■■□□ 2.1
GRAMD1A-214ENST00000603907 MARCH10Q8NA82 808 aaPredicted RBP28.19■■■□□ 2.1
GRAMD1A-214ENST00000603907 RGPD5Q99666 1765 aa28.19■■■□□ 2.1
GRAMD1A-214ENST00000603907 CSB-PGBD3P0DP91 1061 aa28.18■■■□□ 2.1
GRAMD1A-214ENST00000603907 INSRP06213 1382 aa28.18■■■□□ 2.1
GRAMD1A-214ENST00000603907 RALBP1Q15311 655 aa28.17■■■□□ 2.1
GRAMD1A-214ENST00000603907 PTF1AQ7RTS3 328 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms