RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 ILDR2Q71H61 639 aa17.75■□□□□ 0.43
SRRM1-223ENST00000600523 TOM1L2Q6ZVM7 507 aa17.74■□□□□ 0.43
SRRM1-223ENST00000600523 MORC1Q86VD1 984 aa17.74■□□□□ 0.43
SRRM1-223ENST00000600523 COL5A2P05997 1499 aaPredicted RBP17.74■□□□□ 0.43
SRRM1-223ENST00000600523 CAMTA1Q9Y6Y1 1673 aa17.74■□□□□ 0.43
SRRM1-223ENST00000600523 SPATA31A5Q5VU36 1347 aa17.73■□□□□ 0.43
SRRM1-223ENST00000600523 SPATA31A7Q8IWB4 1347 aa17.73■□□□□ 0.43
SRRM1-223ENST00000600523 NRAPQ86VF7 1730 aa17.73■□□□□ 0.43
SRRM1-223ENST00000600523 IP6K1Q92551 441 aa17.73■□□□□ 0.43
SRRM1-223ENST00000600523 USP35Q9P2H5 1018 aa17.73■□□□□ 0.43
SRRM1-223ENST00000600523 LMO7Q8WWI1 1683 aa17.73■□□□□ 0.43
SRRM1-223ENST00000600523 BLMP54132 1417 aaPredicted RBP17.72■□□□□ 0.43
SRRM1-223ENST00000600523 RTL1A6NKG5 1358 aa17.72■□□□□ 0.43
SRRM1-223ENST00000600523 LARP1Q6PKG0 1096 aaKnown RBP17.72■□□□□ 0.43
SRRM1-223ENST00000600523 MAP3K19Q56UN5 1328 aa17.72■□□□□ 0.43
SRRM1-223ENST00000600523 WDR17Q8IZU2 1322 aa17.72■□□□□ 0.43
SRRM1-223ENST00000600523 KIF24Q5T7B8 1368 aa17.71■□□□□ 0.43
SRRM1-223ENST00000600523 RRS1Q15050 365 aaKnown RBP17.71■□□□□ 0.43
SRRM1-223ENST00000600523 AXIN2Q9Y2T1 843 aa17.71■□□□□ 0.43
SRRM1-223ENST00000600523 THRAP3Q9Y2W1 955 aaKnown RBP17.71■□□□□ 0.43
SRRM1-223ENST00000600523 CRB1P82279 1406 aa17.71■□□□□ 0.43
SRRM1-223ENST00000600523 LTN1O94822 1766 aa17.71■□□□□ 0.43
SRRM1-223ENST00000600523 SPATA31A1Q5TZJ5 1347 aa17.71■□□□□ 0.42
SRRM1-223ENST00000600523 PPM1GO15355 546 aaPredicted RBP17.7■□□□□ 0.42
SRRM1-223ENST00000600523 TNNT2P45379 298 aaPredicted RBP17.7■□□□□ 0.42
SRRM1-223ENST00000600523 FAM98CQ17RN3 349 aaKnown RBP17.7■□□□□ 0.42
SRRM1-223ENST00000600523 TCP11L2Q8N4U5 519 aa17.7■□□□□ 0.42
SRRM1-223ENST00000600523 SMG6Q86US8 1419 aaKnown RBP17.7■□□□□ 0.42
SRRM1-223ENST00000600523 HOXC9P31274 260 aa17.69■□□□□ 0.42
SRRM1-223ENST00000600523 ANKRD24Q8TF21 1146 aa17.69■□□□□ 0.42
SRRM1-223ENST00000600523 FLT4P35916 1363 aa17.68■□□□□ 0.42
SRRM1-223ENST00000600523 PER1O15534 1290 aaPredicted RBP17.68■□□□□ 0.42
SRRM1-223ENST00000600523 AMER1Q5JTC6 1135 aaPredicted RBP17.68■□□□□ 0.42
SRRM1-223ENST00000600523 SEPT12Q8IYM1 358 aa17.68■□□□□ 0.42
SRRM1-223ENST00000600523 NLRP2Q9NX02 1062 aa17.68■□□□□ 0.42
SRRM1-223ENST00000600523 ERBB3P21860 1342 aa17.68■□□□□ 0.42
SRRM1-223ENST00000600523 ANKRD26Q9UPS8 1709 aa17.67■□□□□ 0.42
SRRM1-223ENST00000600523 GLI3P10071 1580 aa17.67■□□□□ 0.42
SRRM1-223ENST00000600523 RGS12O14924 1447 aa17.67■□□□□ 0.42
SRRM1-223ENST00000600523 COL18A1P39060 1754 aa17.67■□□□□ 0.42
SRRM1-223ENST00000600523 FBLN1P23142 703 aa17.67■□□□□ 0.42
SRRM1-223ENST00000600523 CC2D1BQ5T0F9 858 aaKnown RBP17.67■□□□□ 0.42
SRRM1-223ENST00000600523 BARGINQ6ZT62 677 aa17.67■□□□□ 0.42
SRRM1-223ENST00000600523 LTV1Q96GA3 475 aaPredicted RBP17.67■□□□□ 0.42
SRRM1-223ENST00000600523 CDCA7Q9BWT1 371 aaPredicted RBP17.67■□□□□ 0.42
SRRM1-223ENST00000600523 CARD10Q9BWT7 1032 aa17.67■□□□□ 0.42
SRRM1-223ENST00000600523 NPC1L1Q9UHC9 1359 aa17.66■□□□□ 0.42
SRRM1-223ENST00000600523 ONECUT3O60422 494 aaPredicted RBP17.66■□□□□ 0.42
SRRM1-223ENST00000600523 CNGB1Q14028 1251 aaPredicted RBP17.64■□□□□ 0.41
SRRM1-223ENST00000600523 EMILIN1Q9Y6C2 1016 aa17.64■□□□□ 0.41
SRRM1-223ENST00000600523 INSRP06213 1382 aa17.64■□□□□ 0.41
SRRM1-223ENST00000600523 SOCS7O14512 581 aa17.63■□□□□ 0.41
SRRM1-223ENST00000600523 KRT27Q7Z3Y8 459 aa17.63■□□□□ 0.41
SRRM1-223ENST00000600523 PDE3BQ13370 1112 aa17.62■□□□□ 0.41
SRRM1-223ENST00000600523 POLKQ9UBT6 870 aa17.62■□□□□ 0.41
SRRM1-223ENST00000600523 RGPD5Q99666 1765 aa17.61■□□□□ 0.41
SRRM1-223ENST00000600523 DDX10Q13206 875 aaKnown RBP17.61■□□□□ 0.41
SRRM1-223ENST00000600523 HSP90AB2PQ58FF8 381 aa17.61■□□□□ 0.41
SRRM1-223ENST00000600523 FAM208AQ9UK61 1670 aaKnown RBP17.6■□□□□ 0.41
SRRM1-223ENST00000600523 ZNF316A6NFI3 1004 aaPredicted RBP17.59■□□□□ 0.41
SRRM1-223ENST00000600523 DDB1Q16531 1140 aa17.59■□□□□ 0.41
SRRM1-223ENST00000600523 IL2RBP14784 551 aa17.58■□□□□ 0.4
SRRM1-223ENST00000600523 MAP2P11137 1827 aaKnown RBP17.57■□□□□ 0.4
SRRM1-223ENST00000600523 EXOC5O00471 708 aa17.57■□□□□ 0.4
SRRM1-223ENST00000600523 RAPGEF4Q8WZA2 1011 aa17.57■□□□□ 0.4
SRRM1-223ENST00000600523 CFAP53Q96M91 514 aa17.56■□□□□ 0.4
SRRM1-223ENST00000600523 THSD7AQ9UPZ6 1657 aa17.55■□□□□ 0.4
SRRM1-223ENST00000600523 MTHFSP49914 203 aa17.55■□□□□ 0.4
SRRM1-223ENST00000600523 PEAK1Q9H792 1746 aa17.55■□□□□ 0.4
SRRM1-223ENST00000600523 SF3B2Q13435 895 aaKnown RBP17.54■□□□□ 0.4
SRRM1-223ENST00000600523 FAM196AQ6ZSG2 479 aa17.54■□□□□ 0.4
SRRM1-223ENST00000600523 TATP17735 454 aaPredicted RBP17.53■□□□□ 0.4
SRRM1-223ENST00000600523 NBPF6Q5VWK0 638 aa17.53■□□□□ 0.4
SRRM1-223ENST00000600523 CCDC125Q86Z20 511 aa17.53■□□□□ 0.4
SRRM1-223ENST00000600523 NBPF4Q96M43 638 aa17.53■□□□□ 0.4
SRRM1-223ENST00000600523 EIF4A2Q14240 407 aaKnown RBP17.52■□□□□ 0.4
SRRM1-223ENST00000600523 PARP4Q9UKK3 1724 aaKnown RBP17.52■□□□□ 0.39
SRRM1-223ENST00000600523 RALBP1Q15311 655 aa17.51■□□□□ 0.39
SRRM1-223ENST00000600523 DISP2A7MBM2 1401 aa17.5■□□□□ 0.39
SRRM1-223ENST00000600523 BRWD3Q6RI45 1802 aa17.5■□□□□ 0.39
SRRM1-223ENST00000600523 DIAPH1O60610 1272 aaKnown RBP17.5■□□□□ 0.39
SRRM1-223ENST00000600523 USHBP1Q8N6Y0 703 aa17.5■□□□□ 0.39
SRRM1-223ENST00000600523 TNS2Q63HR2 1409 aa17.49■□□□□ 0.39
SRRM1-223ENST00000600523 UPF1Q92900 1129 aaKnown RBP eCLIP17.49■□□□□ 0.39
SRRM1-223ENST00000600523 OVOS2A0A0G2JMS6 1433 aa17.48■□□□□ 0.39
SRRM1-223ENST00000600523 PPP2R1AP30153 589 aa17.48■□□□□ 0.39
SRRM1-223ENST00000600523 EYA1Q99502 592 aa17.48■□□□□ 0.39
SRRM1-223ENST00000600523 WNK3Q9BYP7 1800 aa17.48■□□□□ 0.39
SRRM1-223ENST00000600523 LRRC37A3O60309 1634 aa17.47■□□□□ 0.39
SRRM1-223ENST00000600523 ZCRB1Q8TBF4 217 aaKnown RBP17.47■□□□□ 0.39
SRRM1-223ENST00000600523 SPG7Q9UQ90 795 aa17.47■□□□□ 0.39
SRRM1-223ENST00000600523 NUDCQ9Y266 331 aa17.47■□□□□ 0.39
SRRM1-223ENST00000600523 PARD3Q8TEW0 1356 aa17.46■□□□□ 0.39
SRRM1-223ENST00000600523 FAM182BQ5T319 152 aa17.46■□□□□ 0.39
SRRM1-223ENST00000600523 DDX54Q8TDD1 881 aaKnown RBP17.46■□□□□ 0.39
SRRM1-223ENST00000600523 IGSF1Q8N6C5 1336 aa17.46■□□□□ 0.38
SRRM1-223ENST00000600523 IL13P35225 146 aa17.45■□□□□ 0.38
SRRM1-223ENST00000600523 RGPD2P0DJD1 1756 aa17.44■□□□□ 0.38
SRRM1-223ENST00000600523 U2SURPO15042 1029 aaKnown RBP17.44■□□□□ 0.38
SRRM1-223ENST00000600523 PCDH11XQ9BZA7 1347 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms