RNA–Protein interactions for RNA: ENST00000599689.1

SHD-204, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

TSL 5 BASIC

Gene SHD, Length 1,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-204ENST00000599689 U2AF1L5P0DN76 240 aaPredicted RBP30.31■■■□□ 2.44
SHD-204ENST00000599689 U2AF1Q01081 240 aaKnown RBP eCLIP30.31■■■□□ 2.44
SHD-204ENST00000599689 COG3Q96JB2 828 aa30.31■■■□□ 2.44
SHD-204ENST00000599689 USP6P35125 1406 aa30.31■■■□□ 2.44
SHD-204ENST00000599689 POLKQ9UBT6 870 aa30.3■■■□□ 2.44
SHD-204ENST00000599689 AATKQ6ZMQ8 1374 aa30.3■■■□□ 2.44
SHD-204ENST00000599689 TTC21BQ7Z4L5 1316 aa30.3■■■□□ 2.44
SHD-204ENST00000599689 ZRANB1Q9UGI0 708 aa30.3■■■□□ 2.44
SHD-204ENST00000599689 PLEKHG5O94827 1062 aa30.29■■■□□ 2.44
SHD-204ENST00000599689 RBM6P78332 1123 aaKnown RBP30.29■■■□□ 2.44
SHD-204ENST00000599689 TRPC5Q9UL62 973 aaPredicted RBP30.28■■■□□ 2.44
SHD-204ENST00000599689 DIAPH1O60610 1272 aaKnown RBP30.27■■■□□ 2.44
SHD-204ENST00000599689 SLFN5Q08AF3 891 aa30.27■■■□□ 2.44
SHD-204ENST00000599689 DUSP27Q5VZP5 1158 aa30.27■■■□□ 2.44
SHD-204ENST00000599689 ALS2Q96Q42 1657 aa30.26■■■□□ 2.44
SHD-204ENST00000599689 BCL9LQ86UU0 1499 aa30.26■■■□□ 2.43
SHD-204ENST00000599689 CDK12Q9NYV4 1490 aaPredicted RBP30.26■■■□□ 2.43
SHD-204ENST00000599689 SSH2Q76I76 1423 aa30.26■■■□□ 2.43
SHD-204ENST00000599689 PELP1Q8IZL8 1130 aaKnown RBP30.25■■■□□ 2.43
SHD-204ENST00000599689 TCP11L2Q8N4U5 519 aa30.25■■■□□ 2.43
SHD-204ENST00000599689 MARF1Q9Y4F3 1742 aaKnown RBP30.25■■■□□ 2.43
SHD-204ENST00000599689 NCBP3Q53F19 620 aaKnown RBP30.25■■■□□ 2.43
SHD-204ENST00000599689 TRMT2AQ8IZ69 625 aaKnown RBP30.25■■■□□ 2.43
SHD-204ENST00000599689 U2SURPO15042 1029 aaKnown RBP30.24■■■□□ 2.43
SHD-204ENST00000599689 FBLN1P23142 703 aa30.24■■■□□ 2.43
SHD-204ENST00000599689 PPP4R2Q9NY27 417 aa30.24■■■□□ 2.43
SHD-204ENST00000599689 RRP1P56182 461 aaKnown RBP30.22■■■□□ 2.43
SHD-204ENST00000599689 ATRNO75882 1429 aa30.22■■■□□ 2.43
SHD-204ENST00000599689 SLIT2O94813 1529 aa30.22■■■□□ 2.43
SHD-204ENST00000599689 WWC1Q8IX03 1113 aa30.22■■■□□ 2.43
SHD-204ENST00000599689 TTC21AQ8NDW8 1320 aa30.21■■■□□ 2.43
SHD-204ENST00000599689 OVOS2A0A0J9YW53 1432 aa30.2■■■□□ 2.43
SHD-204ENST00000599689 OVOS2Q6IE36 1432 aa30.2■■■□□ 2.43
SHD-204ENST00000599689 E9PSI1 815 aa30.2■■■□□ 2.43
SHD-204ENST00000599689 PPM1GO15355 546 aaPredicted RBP30.2■■■□□ 2.43
SHD-204ENST00000599689 UNC5CLQ8IV45 518 aa30.2■■■□□ 2.43
SHD-204ENST00000599689 ABCA3Q99758 1704 aa30.19■■■□□ 2.42
SHD-204ENST00000599689 CCDC27Q2M243 656 aa30.19■■■□□ 2.42
SHD-204ENST00000599689 PLEKHF1Q96S99 279 aa30.19■■■□□ 2.42
SHD-204ENST00000599689 EMILIN1Q9Y6C2 1016 aa30.19■■■□□ 2.42
SHD-204ENST00000599689 PNNQ9H307 717 aaKnown RBP30.17■■■□□ 2.42
SHD-204ENST00000599689 RRP7AQ9Y3A4 280 aaKnown RBP30.17■■■□□ 2.42
SHD-204ENST00000599689 FAM83GA6ND36 823 aa30.16■■■□□ 2.42
SHD-204ENST00000599689 SPINK5Q9NQ38 1064 aaPredicted RBP30.16■■■□□ 2.42
SHD-204ENST00000599689 NEUROD2Q15784 382 aa30.16■■■□□ 2.42
SHD-204ENST00000599689 ABTB2Q8N961 1025 aa30.16■■■□□ 2.42
SHD-204ENST00000599689 RGS12O14924 1447 aa30.14■■■□□ 2.42
SHD-204ENST00000599689 NUTM2GQ5VZR2 741 aa30.14■■■□□ 2.42
SHD-204ENST00000599689 USP31Q70CQ4 1352 aa30.14■■■□□ 2.41
SHD-204ENST00000599689 WDR63Q8IWG1 891 aa30.13■■■□□ 2.41
SHD-204ENST00000599689 GJD4Q96KN9 370 aaPredicted RBP30.13■■■□□ 2.41
SHD-204ENST00000599689 FCHSD2O94868 740 aa30.12■■■□□ 2.41
SHD-204ENST00000599689 RRS1Q15050 365 aaKnown RBP30.12■■■□□ 2.41
SHD-204ENST00000599689 MAPK8IP3Q9UPT6 1336 aa30.11■■■□□ 2.41
SHD-204ENST00000599689 IL13P35225 146 aa30.11■■■□□ 2.41
SHD-204ENST00000599689 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.11■■■□□ 2.41
SHD-204ENST00000599689 PIK3C2AO00443 1686 aa30.09■■■□□ 2.41
SHD-204ENST00000599689 CRYBG1Q9Y4K1 1723 aa30.09■■■□□ 2.41
SHD-204ENST00000599689 VPS72Q15906 364 aa30.08■■■□□ 2.41
SHD-204ENST00000599689 PRDM11Q9NQV5 511 aa30.08■■■□□ 2.41
SHD-204ENST00000599689 TMPOP42166 694 aaKnown RBP30.08■■■□□ 2.41
SHD-204ENST00000599689 BTG4Q9NY30 223 aa30.07■■■□□ 2.4
SHD-204ENST00000599689 USP19O94966 1318 aa30.06■■■□□ 2.4
SHD-204ENST00000599689 RSPH6AQ9H0K4 717 aa30.06■■■□□ 2.4
SHD-204ENST00000599689 NWD2Q9ULI1 1742 aa30.06■■■□□ 2.4
SHD-204ENST00000599689 PLCH1Q4KWH8 1693 aa30.06■■■□□ 2.4
SHD-204ENST00000599689 USP54Q70EL1 1684 aa30.05■■■□□ 2.4
SHD-204ENST00000599689 KIAA0232Q92628 1395 aa30.05■■■□□ 2.4
SHD-204ENST00000599689 COL14A1Q05707 1796 aaKnown RBP30.03■■■□□ 2.4
SHD-204ENST00000599689 PEAK1Q9H792 1746 aa30.03■■■□□ 2.4
SHD-204ENST00000599689 ZC3H6P61129 1189 aaKnown RBP30.02■■■□□ 2.4
SHD-204ENST00000599689 PHRF1Q9P1Y6 1649 aaKnown RBP30.02■■■□□ 2.4
SHD-204ENST00000599689 NLRP6P59044 892 aa30.02■■■□□ 2.4
SHD-204ENST00000599689 PRKAR2BP31323 418 aa30.01■■■□□ 2.39
SHD-204ENST00000599689 B4GALNT3Q6L9W6 998 aa30.01■■■□□ 2.39
SHD-204ENST00000599689 CCDC9Q9Y3X0 531 aaKnown RBP30.01■■■□□ 2.39
SHD-204ENST00000599689 GCP02774 474 aa30■■■□□ 2.39
SHD-204ENST00000599689 GLI3P10071 1580 aa30■■■□□ 2.39
SHD-204ENST00000599689 NEFMP07197 916 aa29.99■■■□□ 2.39
SHD-204ENST00000599689 UPF1Q92900 1129 aaKnown RBP eCLIP29.99■■■□□ 2.39
SHD-204ENST00000599689 TRIM35Q9UPQ4 493 aa29.99■■■□□ 2.39
SHD-204ENST00000599689 CHRNA2Q15822 529 aa29.99■■■□□ 2.39
SHD-204ENST00000599689 CPDO75976 1380 aa29.99■■■□□ 2.39
SHD-204ENST00000599689 PLIN1O60240 522 aa29.98■■■□□ 2.39
SHD-204ENST00000599689 HMOX1P09601 288 aa29.98■■■□□ 2.39
SHD-204ENST00000599689 RIPK4P57078 832 aa29.97■■■□□ 2.39
SHD-204ENST00000599689 MYH16Q9H6N6 1097 aa29.96■■■□□ 2.39
SHD-204ENST00000599689 EIF4A2Q14240 407 aaKnown RBP29.95■■■□□ 2.38
SHD-204ENST00000599689 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.95■■■□□ 2.38
SHD-204ENST00000599689 EXOC6Q8TAG9 804 aa29.95■■■□□ 2.38
SHD-204ENST00000599689 NRAPQ86VF7 1730 aa29.95■■■□□ 2.38
SHD-204ENST00000599689 ONECUT3O60422 494 aaPredicted RBP29.94■■■□□ 2.38
SHD-204ENST00000599689 MAP3K19Q56UN5 1328 aa29.94■■■□□ 2.38
SHD-204ENST00000599689 IL16Q14005 1332 aa29.93■■■□□ 2.38
SHD-204ENST00000599689 SOX12O15370 315 aa29.93■■■□□ 2.38
SHD-204ENST00000599689 RGPD1P0DJD0 1748 aa29.92■■■□□ 2.38
SHD-204ENST00000599689 SLIT3O75094 1523 aa29.92■■■□□ 2.38
SHD-204ENST00000599689 NFE2L2Q16236 605 aa29.91■■■□□ 2.38
SHD-204ENST00000599689 HSP90AB2PQ58FF8 381 aa29.91■■■□□ 2.38
SHD-204ENST00000599689 PHACTR3Q96KR7 559 aa29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms