RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 ARHGEF10O15013 1369 aa30.88■■■□□ 2.53
SYMPK-212ENST00000598896 RSPH6AQ9H0K4 717 aa30.88■■■□□ 2.53
SYMPK-212ENST00000598896 HMOX1P09601 288 aa30.87■■■□□ 2.53
SYMPK-212ENST00000598896 TCP11L2Q8N4U5 519 aa30.87■■■□□ 2.53
SYMPK-212ENST00000598896 ZNF521Q96K83 1311 aa30.85■■■□□ 2.53
SYMPK-212ENST00000598896 FCHSD2O94868 740 aa30.85■■■□□ 2.53
SYMPK-212ENST00000598896 ARHGEF25Q86VW2 580 aa30.85■■■□□ 2.53
SYMPK-212ENST00000598896 CABLES1Q8TDN4 633 aa30.84■■■□□ 2.53
SYMPK-212ENST00000598896 IP6K1Q92551 441 aa30.82■■■□□ 2.53
SYMPK-212ENST00000598896 RRP7AQ9Y3A4 280 aaKnown RBP30.82■■■□□ 2.53
SYMPK-212ENST00000598896 PRKAR2BP31323 418 aa30.82■■■□□ 2.52
SYMPK-212ENST00000598896 ZBTB7CA1YPR0 619 aa30.81■■■□□ 2.52
SYMPK-212ENST00000598896 AHDC1Q5TGY3 1603 aaPredicted RBP30.81■■■□□ 2.52
SYMPK-212ENST00000598896 AEBP1Q8IUX7 1158 aa30.8■■■□□ 2.52
SYMPK-212ENST00000598896 CDCA7LQ96GN5 454 aa30.8■■■□□ 2.52
SYMPK-212ENST00000598896 MAPK8IP3Q9UPT6 1336 aa30.79■■■□□ 2.52
SYMPK-212ENST00000598896 NEUROD2Q15784 382 aa30.78■■■□□ 2.52
SYMPK-212ENST00000598896 PNNQ9H307 717 aaKnown RBP30.78■■■□□ 2.52
SYMPK-212ENST00000598896 ZC3H6P61129 1189 aaKnown RBP30.78■■■□□ 2.52
SYMPK-212ENST00000598896 PDE3BQ13370 1112 aa30.78■■■□□ 2.52
SYMPK-212ENST00000598896 NGEFQ8N5V2 710 aa30.78■■■□□ 2.52
SYMPK-212ENST00000598896 SULT6B1Q6IMI4 303 aa30.77■■■□□ 2.52
SYMPK-212ENST00000598896 ABCA3Q99758 1704 aa30.77■■■□□ 2.52
SYMPK-212ENST00000598896 LTV1Q96GA3 475 aaPredicted RBP30.76■■■□□ 2.51
SYMPK-212ENST00000598896 PHACTR3Q96KR7 559 aa30.76■■■□□ 2.51
SYMPK-212ENST00000598896 EYA1Q99502 592 aa30.76■■■□□ 2.51
SYMPK-212ENST00000598896 PHF23Q9BUL5 403 aaPredicted RBP30.76■■■□□ 2.51
SYMPK-212ENST00000598896 IGSF1Q8N6C5 1336 aa30.75■■■□□ 2.51
SYMPK-212ENST00000598896 TMPOP42166 694 aaKnown RBP30.74■■■□□ 2.51
SYMPK-212ENST00000598896 WWC1Q8IX03 1113 aa30.74■■■□□ 2.51
SYMPK-212ENST00000598896 RGPD5Q99666 1765 aa30.74■■■□□ 2.51
SYMPK-212ENST00000598896 AXIN2Q9Y2T1 843 aa30.73■■■□□ 2.51
SYMPK-212ENST00000598896 KDRP35968 1356 aa30.73■■■□□ 2.51
SYMPK-212ENST00000598896 COL18A1P39060 1754 aa30.72■■■□□ 2.51
SYMPK-212ENST00000598896 TOM1O60784 492 aa30.72■■■□□ 2.51
SYMPK-212ENST00000598896 RGPD2P0DJD1 1756 aa30.7■■■□□ 2.51
SYMPK-212ENST00000598896 CCDC27Q2M243 656 aa30.7■■■□□ 2.51
SYMPK-212ENST00000598896 GOLGA2Q08379 1002 aa30.7■■■□□ 2.5
SYMPK-212ENST00000598896 NCBP3Q53F19 620 aaKnown RBP30.7■■■□□ 2.5
SYMPK-212ENST00000598896 CPDO75976 1380 aa30.7■■■□□ 2.5
SYMPK-212ENST00000598896 KIAA0232Q92628 1395 aa30.69■■■□□ 2.5
SYMPK-212ENST00000598896 NEFMP07197 916 aa30.67■■■□□ 2.5
SYMPK-212ENST00000598896 PIP4K2BP78356 416 aa30.67■■■□□ 2.5
SYMPK-212ENST00000598896 SPINK5Q9NQ38 1064 aaPredicted RBP30.67■■■□□ 2.5
SYMPK-212ENST00000598896 PHLPP1O60346 1717 aa30.67■■■□□ 2.5
SYMPK-212ENST00000598896 COL16A1Q07092 1604 aaPredicted RBP30.67■■■□□ 2.5
SYMPK-212ENST00000598896 LRRC59Q96AG4 307 aaKnown RBP30.66■■■□□ 2.5
SYMPK-212ENST00000598896 TRIM35Q9UPQ4 493 aa30.66■■■□□ 2.5
SYMPK-212ENST00000598896 ABCC6O95255 1503 aa30.65■■■□□ 2.5
SYMPK-212ENST00000598896 RIPK4P57078 832 aa30.65■■■□□ 2.5
SYMPK-212ENST00000598896 UBAP1LF5GYI3 381 aa30.65■■■□□ 2.5
SYMPK-212ENST00000598896 DLG5Q8TDM6 1919 aa30.64■■■□□ 2.5
SYMPK-212ENST00000598896 CHRNA2Q15822 529 aa30.64■■■□□ 2.5
SYMPK-212ENST00000598896 NFE2L2Q16236 605 aa30.64■■■□□ 2.5
SYMPK-212ENST00000598896 NBPF6Q5VWK0 638 aa30.64■■■□□ 2.5
SYMPK-212ENST00000598896 ANKRD24Q8TF21 1146 aa30.64■■■□□ 2.5
SYMPK-212ENST00000598896 NBPF4Q96M43 638 aa30.64■■■□□ 2.5
SYMPK-212ENST00000598896 SLFN5Q08AF3 891 aa30.63■■■□□ 2.49
SYMPK-212ENST00000598896 USHBP1Q8N6Y0 703 aa30.63■■■□□ 2.49
SYMPK-212ENST00000598896 COL22A1Q8NFW1 1626 aaPredicted RBP30.63■■■□□ 2.49
SYMPK-212ENST00000598896 ERBB3P21860 1342 aa30.62■■■□□ 2.49
SYMPK-212ENST00000598896 CAMTA1Q9Y6Y1 1673 aa30.62■■■□□ 2.49
SYMPK-212ENST00000598896 DUSP27Q5VZP5 1158 aa30.62■■■□□ 2.49
SYMPK-212ENST00000598896 TRMT2AQ8IZ69 625 aaKnown RBP30.61■■■□□ 2.49
SYMPK-212ENST00000598896 GTF3C3Q9Y5Q9 886 aa30.61■■■□□ 2.49
SYMPK-212ENST00000598896 HAP1P54257 671 aaPredicted RBP30.6■■■□□ 2.49
SYMPK-212ENST00000598896 WDR63Q8IWG1 891 aa30.6■■■□□ 2.49
SYMPK-212ENST00000598896 CERKQ8TCT0 537 aa30.6■■■□□ 2.49
SYMPK-212ENST00000598896 NCAPD2Q15021 1401 aa30.59■■■□□ 2.49
SYMPK-212ENST00000598896 LMO7Q8WWI1 1683 aa30.59■■■□□ 2.49
SYMPK-212ENST00000598896 SUPT16HQ9Y5B9 1047 aaKnown RBP30.58■■■□□ 2.49
SYMPK-212ENST00000598896 E9PSI1 815 aa30.57■■■□□ 2.48
SYMPK-212ENST00000598896 PRDM11Q9NQV5 511 aa30.57■■■□□ 2.48
SYMPK-212ENST00000598896 FAM208AQ9UK61 1670 aaKnown RBP30.53■■■□□ 2.48
SYMPK-212ENST00000598896 MTHFSDQ2M296 383 aaKnown RBP30.53■■■□□ 2.48
SYMPK-212ENST00000598896 FAM83GA6ND36 823 aa30.5■■■□□ 2.47
SYMPK-212ENST00000598896 THUMPD2Q9BTF0 503 aaKnown RBP30.5■■■□□ 2.47
SYMPK-212ENST00000598896 COL5A2P05997 1499 aaPredicted RBP30.48■■■□□ 2.47
SYMPK-212ENST00000598896 LMOD3Q0VAK6 560 aa30.47■■■□□ 2.47
SYMPK-212ENST00000598896 IL16Q14005 1332 aa30.47■■■□□ 2.47
SYMPK-212ENST00000598896 NLRP2Q9NX02 1062 aa30.46■■■□□ 2.47
SYMPK-212ENST00000598896 CSB-PGBD3P0DP91 1061 aa30.46■■■□□ 2.47
SYMPK-212ENST00000598896 DCTN1Q14203 1278 aa30.46■■■□□ 2.47
SYMPK-212ENST00000598896 RCAN3Q9UKA8 241 aa30.46■■■□□ 2.47
SYMPK-212ENST00000598896 GAS2L2Q8NHY3 880 aa30.45■■■□□ 2.47
SYMPK-212ENST00000598896 TSR2Q969E8 191 aaKnown RBP30.42■■■□□ 2.46
SYMPK-212ENST00000598896 MYH16Q9H6N6 1097 aa30.42■■■□□ 2.46
SYMPK-212ENST00000598896 COL14A1Q05707 1796 aaKnown RBP30.42■■■□□ 2.46
SYMPK-212ENST00000598896 WDR17Q8IZU2 1322 aa30.42■■■□□ 2.46
SYMPK-212ENST00000598896 FANCIQ9NVI1 1328 aa30.42■■■□□ 2.46
SYMPK-212ENST00000598896 MCM10Q7L590 875 aa30.41■■■□□ 2.46
SYMPK-212ENST00000598896 RNF123Q5XPI4 1314 aa30.4■■■□□ 2.46
SYMPK-212ENST00000598896 MEGF6O75095 1541 aa30.38■■■□□ 2.45
SYMPK-212ENST00000598896 CALD1Q05682 793 aaKnown RBP30.38■■■□□ 2.45
SYMPK-212ENST00000598896 MAP3K5Q99683 1374 aa30.37■■■□□ 2.45
SYMPK-212ENST00000598896 STRN4Q9NRL3 753 aa30.36■■■□□ 2.45
SYMPK-212ENST00000598896 BTG4Q9NY30 223 aa30.36■■■□□ 2.45
SYMPK-212ENST00000598896 LRRC37A3O60309 1634 aa30.35■■■□□ 2.45
SYMPK-212ENST00000598896 GNAT3A8MTJ3 354 aa30.35■■■□□ 2.45
SYMPK-212ENST00000598896 ZNF853P0CG23 659 aa30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms