RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 PDE3AQ14432 1141 aa21.85■■□□□ 1.09
SHKBP1-205ENST00000594973 NGDNQ8NEJ9 315 aaKnown RBP21.85■■□□□ 1.09
SHKBP1-205ENST00000594973 ANKLE2Q86XL3 938 aa21.85■■□□□ 1.09
SHKBP1-205ENST00000594973 COG6Q9Y2V7 657 aa21.85■■□□□ 1.09
SHKBP1-205ENST00000594973 EXOSC9Q06265 439 aaKnown RBP21.84■■□□□ 1.09
SHKBP1-205ENST00000594973 KDM2BQ8NHM5 1336 aa21.83■■□□□ 1.09
SHKBP1-205ENST00000594973 RBM33Q96EV2 1170 aaKnown RBP21.82■■□□□ 1.08
SHKBP1-205ENST00000594973 TNNQ9UQP3 1299 aa21.82■■□□□ 1.08
SHKBP1-205ENST00000594973 NRKQ7Z2Y5 1582 aa21.81■■□□□ 1.08
SHKBP1-205ENST00000594973 CENPQQ7L2Z9 268 aaPredicted RBP21.81■■□□□ 1.08
SHKBP1-205ENST00000594973 OVOS2A0A0J9YW53 1432 aa21.81■■□□□ 1.08
SHKBP1-205ENST00000594973 OVOS2Q6IE36 1432 aa21.81■■□□□ 1.08
SHKBP1-205ENST00000594973 IL16Q14005 1332 aa21.8■■□□□ 1.08
SHKBP1-205ENST00000594973 NFE2L2Q16236 605 aa21.8■■□□□ 1.08
SHKBP1-205ENST00000594973 CLUAP1Q96AJ1 413 aa21.8■■□□□ 1.08
SHKBP1-205ENST00000594973 XRN1Q8IZH2 1706 aaKnown RBP21.8■■□□□ 1.08
SHKBP1-205ENST00000594973 PKNOX2Q96KN3 472 aa21.8■■□□□ 1.08
SHKBP1-205ENST00000594973 THUMPD2Q9BTF0 503 aaKnown RBP21.8■■□□□ 1.08
SHKBP1-205ENST00000594973 RLBP1P12271 317 aa21.78■■□□□ 1.08
SHKBP1-205ENST00000594973 EIF4A2Q14240 407 aaKnown RBP21.78■■□□□ 1.08
SHKBP1-205ENST00000594973 SSH2Q76I76 1423 aa21.78■■□□□ 1.08
SHKBP1-205ENST00000594973 PIK3R4Q99570 1358 aa21.77■■□□□ 1.08
SHKBP1-205ENST00000594973 HSP90AB2PQ58FF8 381 aa21.77■■□□□ 1.08
SHKBP1-205ENST00000594973 SMC4Q9NTJ3 1288 aa21.77■■□□□ 1.08
SHKBP1-205ENST00000594973 RGPD8O14715 1765 aaPredicted RBP21.76■■□□□ 1.07
SHKBP1-205ENST00000594973 CT47B1P0C2W7 299 aaPredicted RBP21.76■■□□□ 1.07
SHKBP1-205ENST00000594973 GLIPR1L2Q4G1C9 344 aa21.76■■□□□ 1.07
SHKBP1-205ENST00000594973 AEBP1Q8IUX7 1158 aa21.76■■□□□ 1.07
SHKBP1-205ENST00000594973 TTC21AQ8NDW8 1320 aa21.76■■□□□ 1.07
SHKBP1-205ENST00000594973 SSH1Q8WYL5 1049 aa21.75■■□□□ 1.07
SHKBP1-205ENST00000594973 ADAMTSL3P82987 1691 aa21.75■■□□□ 1.07
SHKBP1-205ENST00000594973 SULT6B1Q6IMI4 303 aa21.74■■□□□ 1.07
SHKBP1-205ENST00000594973 NUTM2GQ5VZR2 741 aa21.73■■□□□ 1.07
SHKBP1-205ENST00000594973 USP31Q70CQ4 1352 aa21.73■■□□□ 1.07
SHKBP1-205ENST00000594973 IGHDP01880 384 aa21.72■■□□□ 1.07
SHKBP1-205ENST00000594973 ZKSCAN2Q63HK3 967 aa21.72■■□□□ 1.07
SHKBP1-205ENST00000594973 FTSJ3Q8IY81 847 aaKnown RBP21.72■■□□□ 1.07
SHKBP1-205ENST00000594973 MAP3K19Q56UN5 1328 aa21.71■■□□□ 1.07
SHKBP1-205ENST00000594973 FAM83GA6ND36 823 aa21.71■■□□□ 1.07
SHKBP1-205ENST00000594973 ANKARQ7Z5J8 1434 aa21.71■■□□□ 1.07
SHKBP1-205ENST00000594973 NLRP6P59044 892 aa21.71■■□□□ 1.07
SHKBP1-205ENST00000594973 DAXXQ9UER7 740 aaPredicted RBP21.7■■□□□ 1.06
SHKBP1-205ENST00000594973 ZNF142P52746 1687 aaPredicted RBP21.7■■□□□ 1.06
SHKBP1-205ENST00000594973 DCTN1Q14203 1278 aa21.69■■□□□ 1.06
SHKBP1-205ENST00000594973 CALD1Q05682 793 aaKnown RBP21.69■■□□□ 1.06
SHKBP1-205ENST00000594973 DZIP1LQ8IYY4 767 aaKnown RBP21.68■■□□□ 1.06
SHKBP1-205ENST00000594973 PEAK1Q9H792 1746 aa21.68■■□□□ 1.06
SHKBP1-205ENST00000594973 RGS3P49796 1198 aa21.68■■□□□ 1.06
SHKBP1-205ENST00000594973 NOB1Q9ULX3 412 aaKnown RBP21.68■■□□□ 1.06
SHKBP1-205ENST00000594973 NALCNQ8IZF0 1738 aa21.68■■□□□ 1.06
SHKBP1-205ENST00000594973 TRIM27P14373 513 aa21.67■■□□□ 1.06
SHKBP1-205ENST00000594973 AMPHP49418 695 aa21.67■■□□□ 1.06
SHKBP1-205ENST00000594973 LMOD3Q0VAK6 560 aa21.67■■□□□ 1.06
SHKBP1-205ENST00000594973 C14orf37Q86TY3 774 aa21.67■■□□□ 1.06
SHKBP1-205ENST00000594973 ABTB2Q8N961 1025 aa21.67■■□□□ 1.06
SHKBP1-205ENST00000594973 SETD1BQ9UPS6 1966 aaKnown RBP21.67■■□□□ 1.06
SHKBP1-205ENST00000594973 GNAI1P63096 354 aa21.66■■□□□ 1.06
SHKBP1-205ENST00000594973 MBIPQ9NS73 344 aa21.66■■□□□ 1.06
SHKBP1-205ENST00000594973 IFT57Q9NWB7 429 aa21.66■■□□□ 1.06
SHKBP1-205ENST00000594973 ELL2O00472 640 aaPredicted RBP21.66■■□□□ 1.06
SHKBP1-205ENST00000594973 MVPQ14764 893 aaKnown RBP21.66■■□□□ 1.06
SHKBP1-205ENST00000594973 CHD2O14647 1828 aaKnown RBP21.65■■□□□ 1.06
SHKBP1-205ENST00000594973 FMN2Q9NZ56 1722 aa21.65■■□□□ 1.06
SHKBP1-205ENST00000594973 PCDHB15Q9Y5E8 787 aa21.65■■□□□ 1.06
SHKBP1-205ENST00000594973 ATF7IPQ6VMQ6 1270 aa21.64■■□□□ 1.06
SHKBP1-205ENST00000594973 PHF8Q9UPP1 1060 aa21.64■■□□□ 1.06
SHKBP1-205ENST00000594973 PIK3C2AO00443 1686 aa21.64■■□□□ 1.06
SHKBP1-205ENST00000594973 NPHP4O75161 1426 aaPredicted RBP21.64■■□□□ 1.06
SHKBP1-205ENST00000594973 FLT4P35916 1363 aa21.64■■□□□ 1.05
SHKBP1-205ENST00000594973 TSPYL6Q8N831 410 aa21.63■■□□□ 1.05
SHKBP1-205ENST00000594973 SBNO1A3KN83 1393 aa21.63■■□□□ 1.05
SHKBP1-205ENST00000594973 ZNF853P0CG23 659 aa21.62■■□□□ 1.05
SHKBP1-205ENST00000594973 ESCO1Q5FWF5 840 aa21.62■■□□□ 1.05
SHKBP1-205ENST00000594973 ITPRIPQ8IWB1 547 aa21.62■■□□□ 1.05
SHKBP1-205ENST00000594973 CFAP44Q96MT7 982 aa21.62■■□□□ 1.05
SHKBP1-205ENST00000594973 KIF16BQ96L93 1317 aa21.61■■□□□ 1.05
SHKBP1-205ENST00000594973 VAMP4O75379 141 aa21.61■■□□□ 1.05
SHKBP1-205ENST00000594973 AAMPQ13685 434 aa21.61■■□□□ 1.05
SHKBP1-205ENST00000594973 ALDH1L2Q3SY69 923 aa21.61■■□□□ 1.05
SHKBP1-205ENST00000594973 MCM10Q7L590 875 aa21.61■■□□□ 1.05
SHKBP1-205ENST00000594973 DLG5Q8TDM6 1919 aa21.6■■□□□ 1.05
SHKBP1-205ENST00000594973 IPO8O15397 1037 aaKnown RBP21.59■■□□□ 1.05
SHKBP1-205ENST00000594973 TMEM57Q8N5G2 664 aa21.58■■□□□ 1.05
SHKBP1-205ENST00000594973 ADGRL3Q9HAR2 1447 aa21.58■■□□□ 1.05
SHKBP1-205ENST00000594973 PSME1Q06323 249 aa21.58■■□□□ 1.04
SHKBP1-205ENST00000594973 C8orf58Q8NAV2 365 aa21.58■■□□□ 1.04
SHKBP1-205ENST00000594973 EYA1Q99502 592 aa21.58■■□□□ 1.04
SHKBP1-205ENST00000594973 TWISTNBQ3B726 338 aaPredicted RBP21.57■■□□□ 1.04
SHKBP1-205ENST00000594973 ARHGEF10O15013 1369 aa21.57■■□□□ 1.04
SHKBP1-205ENST00000594973 ZNF428Q96B54 188 aa21.57■■□□□ 1.04
SHKBP1-205ENST00000594973 FOXO3O43524 673 aa21.56■■□□□ 1.04
SHKBP1-205ENST00000594973 FRAT2O75474 233 aaPredicted RBP21.56■■□□□ 1.04
SHKBP1-205ENST00000594973 LTV1Q96GA3 475 aaPredicted RBP21.56■■□□□ 1.04
SHKBP1-205ENST00000594973 DDX19BQ9UMR2 479 aa21.56■■□□□ 1.04
SHKBP1-205ENST00000594973 RGPD1P0DJD0 1748 aa21.56■■□□□ 1.04
SHKBP1-205ENST00000594973 HOXC9P31274 260 aa21.56■■□□□ 1.04
SHKBP1-205ENST00000594973 PLEKHG5O94827 1062 aa21.55■■□□□ 1.04
SHKBP1-205ENST00000594973 SLC4A3P48751 1232 aa21.54■■□□□ 1.04
SHKBP1-205ENST00000594973 MTHFSDQ2M296 383 aaKnown RBP21.54■■□□□ 1.04
SHKBP1-205ENST00000594973 MRPL50Q8N5N7 158 aaKnown RBP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms