RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 ABCC6O95255 1503 aa20.15■□□□□ 0.82
DDX39A-217ENST00000592391 POLR3GLQ9BT43 218 aa20.14■□□□□ 0.81
DDX39A-217ENST00000592391 CARD14Q9BXL6 1004 aa20.14■□□□□ 0.81
DDX39A-217ENST00000592391 USP35Q9P2H5 1018 aa20.14■□□□□ 0.81
DDX39A-217ENST00000592391 CRB1P82279 1406 aa20.13■□□□□ 0.81
DDX39A-217ENST00000592391 FYB1O15117 783 aa20.13■□□□□ 0.81
DDX39A-217ENST00000592391 BARGINQ6ZT62 677 aa20.13■□□□□ 0.81
DDX39A-217ENST00000592391 BRWD3Q6RI45 1802 aa20.13■□□□□ 0.81
DDX39A-217ENST00000592391 THSD7AQ9UPZ6 1657 aa20.13■□□□□ 0.81
DDX39A-217ENST00000592391 KRT27Q7Z3Y8 459 aa20.12■□□□□ 0.81
DDX39A-217ENST00000592391 TCP11L2Q8N4U5 519 aa20.12■□□□□ 0.81
DDX39A-217ENST00000592391 THRAP3Q9Y2W1 955 aaKnown RBP20.12■□□□□ 0.81
DDX39A-217ENST00000592391 NSD3Q9BZ95 1437 aa20.11■□□□□ 0.81
DDX39A-217ENST00000592391 WDR17Q8IZU2 1322 aa20.11■□□□□ 0.81
DDX39A-217ENST00000592391 GGNBP2Q9H3C7 697 aa20.11■□□□□ 0.81
DDX39A-217ENST00000592391 C11orf95C9JLR9 678 aaPredicted RBP20.1■□□□□ 0.81
DDX39A-217ENST00000592391 EP400Q96L91 3159 aa20.09■□□□□ 0.81
DDX39A-217ENST00000592391 TOM1L2Q6ZVM7 507 aa20.09■□□□□ 0.81
DDX39A-217ENST00000592391 LTN1O94822 1766 aa20.08■□□□□ 0.8
DDX39A-217ENST00000592391 CSB-PGBD3P0DP91 1061 aa20.07■□□□□ 0.8
DDX39A-217ENST00000592391 RGPD5Q99666 1765 aa20.07■□□□□ 0.8
DDX39A-217ENST00000592391 KIF20BQ96Q89 1820 aa20.06■□□□□ 0.8
DDX39A-217ENST00000592391 CCDC125Q86Z20 511 aa20.06■□□□□ 0.8
DDX39A-217ENST00000592391 ERBB3P21860 1342 aa20.05■□□□□ 0.8
DDX39A-217ENST00000592391 CGNL1Q0VF96 1302 aa20.05■□□□□ 0.8
DDX39A-217ENST00000592391 MAP3K19Q56UN5 1328 aa20.05■□□□□ 0.8
DDX39A-217ENST00000592391 BLMP54132 1417 aaPredicted RBP20.05■□□□□ 0.8
DDX39A-217ENST00000592391 IP6K1Q92551 441 aa20.05■□□□□ 0.8
DDX39A-217ENST00000592391 CARD10Q9BWT7 1032 aa20.05■□□□□ 0.8
DDX39A-217ENST00000592391 FBLN1P23142 703 aa20.04■□□□□ 0.8
DDX39A-217ENST00000592391 PANK3Q9H999 370 aa20.04■□□□□ 0.8
DDX39A-217ENST00000592391 KIF7Q2M1P5 1343 aa20.03■□□□□ 0.8
DDX39A-217ENST00000592391 ANKRD24Q8TF21 1146 aa20.03■□□□□ 0.8
DDX39A-217ENST00000592391 CCDC7Q96M83 1385 aa20.02■□□□□ 0.8
DDX39A-217ENST00000592391 HOXC9P31274 260 aa20.01■□□□□ 0.79
DDX39A-217ENST00000592391 AMPHP49418 695 aa20.01■□□□□ 0.79
DDX39A-217ENST00000592391 PDE3BQ13370 1112 aa20.01■□□□□ 0.79
DDX39A-217ENST00000592391 RRS1Q15050 365 aaKnown RBP20.01■□□□□ 0.79
DDX39A-217ENST00000592391 FAM182BQ5T319 152 aa20.01■□□□□ 0.79
DDX39A-217ENST00000592391 PARP4Q9UKK3 1724 aaKnown RBP20.01■□□□□ 0.79
DDX39A-217ENST00000592391 RTL1A6NKG5 1358 aa20■□□□□ 0.79
DDX39A-217ENST00000592391 CDCA7Q9BWT1 371 aaPredicted RBP20■□□□□ 0.79
DDX39A-217ENST00000592391 NLRP2Q9NX02 1062 aa19.99■□□□□ 0.79
DDX39A-217ENST00000592391 DISP2A7MBM2 1401 aa19.98■□□□□ 0.79
DDX39A-217ENST00000592391 DDB1Q16531 1140 aa19.97■□□□□ 0.79
DDX39A-217ENST00000592391 FAM196AQ6ZSG2 479 aa19.97■□□□□ 0.79
DDX39A-217ENST00000592391 WNK3Q9BYP7 1800 aa19.97■□□□□ 0.79
DDX39A-217ENST00000592391 KIF24Q5T7B8 1368 aa19.96■□□□□ 0.79
DDX39A-217ENST00000592391 LRRC37A3O60309 1634 aa19.96■□□□□ 0.79
DDX39A-217ENST00000592391 SF3B2Q13435 895 aaKnown RBP19.96■□□□□ 0.79
DDX39A-217ENST00000592391 LTV1Q96GA3 475 aaPredicted RBP19.96■□□□□ 0.79
DDX39A-217ENST00000592391 NSD2O96028 1365 aa19.95■□□□□ 0.78
DDX39A-217ENST00000592391 FLT4P35916 1363 aa19.95■□□□□ 0.78
DDX39A-217ENST00000592391 FAM208AQ9UK61 1670 aaKnown RBP19.94■□□□□ 0.78
DDX39A-217ENST00000592391 INSRP06213 1382 aa19.94■□□□□ 0.78
DDX39A-217ENST00000592391 KNSTRNQ9Y448 316 aa19.93■□□□□ 0.78
DDX39A-217ENST00000592391 WASHC2AQ641Q2 1341 aa19.93■□□□□ 0.78
DDX39A-217ENST00000592391 IL2RBP14784 551 aa19.92■□□□□ 0.78
DDX39A-217ENST00000592391 HSP90AB2PQ58FF8 381 aa19.92■□□□□ 0.78
DDX39A-217ENST00000592391 EMILIN1Q9Y6C2 1016 aa19.92■□□□□ 0.78
DDX39A-217ENST00000592391 PEAK1Q9H792 1746 aa19.92■□□□□ 0.78
DDX39A-217ENST00000592391 ANKRD26Q9UPS8 1709 aa19.92■□□□□ 0.78
DDX39A-217ENST00000592391 SMG6Q86US8 1419 aaKnown RBP19.92■□□□□ 0.78
DDX39A-217ENST00000592391 EXOC5O00471 708 aa19.91■□□□□ 0.78
DDX39A-217ENST00000592391 DEFB132Q7Z7B7 95 aa19.91■□□□□ 0.78
DDX39A-217ENST00000592391 OVOS2A0A0G2JMS6 1433 aa19.91■□□□□ 0.78
DDX39A-217ENST00000592391 RGPD1P0DJD0 1748 aa19.9■□□□□ 0.78
DDX39A-217ENST00000592391 TNS2Q63HR2 1409 aa19.9■□□□□ 0.78
DDX39A-217ENST00000592391 TRIM37O94972 964 aa19.89■□□□□ 0.77
DDX39A-217ENST00000592391 TNNT2P45379 298 aaPredicted RBP19.89■□□□□ 0.77
DDX39A-217ENST00000592391 BAG6P46379 1132 aa19.89■□□□□ 0.77
DDX39A-217ENST00000592391 MARCH10Q8NA82 808 aaPredicted RBP19.89■□□□□ 0.77
DDX39A-217ENST00000592391 POLKQ9UBT6 870 aa19.89■□□□□ 0.77
DDX39A-217ENST00000592391 PPM1GO15355 546 aaPredicted RBP19.88■□□□□ 0.77
DDX39A-217ENST00000592391 AMER1Q5JTC6 1135 aaPredicted RBP19.88■□□□□ 0.77
DDX39A-217ENST00000592391 PER1O15534 1290 aaPredicted RBP19.87■□□□□ 0.77
DDX39A-217ENST00000592391 NBPF6Q5VWK0 638 aa19.87■□□□□ 0.77
DDX39A-217ENST00000592391 MORC1Q86VD1 984 aa19.87■□□□□ 0.77
DDX39A-217ENST00000592391 NBPF4Q96M43 638 aa19.87■□□□□ 0.77
DDX39A-217ENST00000592391 BCL9O00512 1426 aa19.86■□□□□ 0.77
DDX39A-217ENST00000592391 TNS1Q9HBL0 1735 aaKnown RBP19.86■□□□□ 0.77
DDX39A-217ENST00000592391 MAP2P11137 1827 aaKnown RBP19.85■□□□□ 0.77
DDX39A-217ENST00000592391 RGPD2P0DJD1 1756 aa19.84■□□□□ 0.77
DDX39A-217ENST00000592391 EN1Q05925 392 aaPredicted RBP19.83■□□□□ 0.77
DDX39A-217ENST00000592391 USHBP1Q8N6Y0 703 aa19.83■□□□□ 0.77
DDX39A-217ENST00000592391 APBA3O96018 575 aa19.82■□□□□ 0.76
DDX39A-217ENST00000592391 MEGF6O75095 1541 aa19.81■□□□□ 0.76
DDX39A-217ENST00000592391 RAPGEF4Q8WZA2 1011 aa19.8■□□□□ 0.76
DDX39A-217ENST00000592391 BCL11BQ9C0K0 894 aaPredicted RBP19.8■□□□□ 0.76
DDX39A-217ENST00000592391 NCAPD2Q15021 1401 aa19.79■□□□□ 0.76
DDX39A-217ENST00000592391 CAMKK2Q96RR4 588 aa19.79■□□□□ 0.76
DDX39A-217ENST00000592391 PARD3Q8TEW0 1356 aa19.79■□□□□ 0.76
DDX39A-217ENST00000592391 NPC1L1Q9UHC9 1359 aa19.79■□□□□ 0.76
DDX39A-217ENST00000592391 SBF2Q86WG5 1849 aa19.79■□□□□ 0.76
DDX39A-217ENST00000592391 EIF4A2Q14240 407 aaKnown RBP19.78■□□□□ 0.76
DDX39A-217ENST00000592391 EZH2Q15910 746 aaKnown RBP19.78■□□□□ 0.76
DDX39A-217ENST00000592391 CC2D1BQ5T0F9 858 aaKnown RBP19.78■□□□□ 0.76
DDX39A-217ENST00000592391 ZCRB1Q8TBF4 217 aaKnown RBP19.78■□□□□ 0.76
DDX39A-217ENST00000592391 TATP17735 454 aaPredicted RBP19.77■□□□□ 0.76
DDX39A-217ENST00000592391 DDX54Q8TDD1 881 aaKnown RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms