RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 ABCC6O95255 1503 aa38.02■■■■□ 3.68
SMAD4-213ENST00000591914 BARGINQ6ZT62 677 aa38.01■■■■□ 3.68
SMAD4-213ENST00000591914 USP35Q9P2H5 1018 aa38.01■■■■□ 3.68
SMAD4-213ENST00000591914 MYOM1P52179 1685 aa38.01■■■■□ 3.67
SMAD4-213ENST00000591914 EIF4G2P78344 907 aaKnown RBP eCLIP38■■■■□ 3.67
SMAD4-213ENST00000591914 CRB1P82279 1406 aa38■■■■□ 3.67
SMAD4-213ENST00000591914 CCDC125Q86Z20 511 aa37.99■■■■□ 3.67
SMAD4-213ENST00000591914 TCP11L2Q8N4U5 519 aa37.98■■■■□ 3.67
SMAD4-213ENST00000591914 THRAP3Q9Y2W1 955 aaKnown RBP37.97■■■■□ 3.67
SMAD4-213ENST00000591914 RGPD5Q99666 1765 aa37.97■■■■□ 3.67
SMAD4-213ENST00000591914 HSPA5P11021 654 aaKnown RBP37.95■■■■□ 3.67
SMAD4-213ENST00000591914 BLMP54132 1417 aaPredicted RBP37.94■■■■□ 3.66
SMAD4-213ENST00000591914 LTN1O94822 1766 aa37.93■■■■□ 3.66
SMAD4-213ENST00000591914 WDR17Q8IZU2 1322 aa37.93■■■■□ 3.66
SMAD4-213ENST00000591914 COG3Q96JB2 828 aa37.89■■■■□ 3.66
SMAD4-213ENST00000591914 TOM1L2Q6ZVM7 507 aa37.88■■■■□ 3.65
SMAD4-213ENST00000591914 PARP4Q9UKK3 1724 aaKnown RBP37.87■■■■□ 3.65
SMAD4-213ENST00000591914 FYB1O15117 783 aa37.86■■■■□ 3.65
SMAD4-213ENST00000591914 FAM182BQ5T319 152 aa37.84■■■■□ 3.65
SMAD4-213ENST00000591914 CARD14Q9BXL6 1004 aa37.84■■■■□ 3.65
SMAD4-213ENST00000591914 KIF20BQ96Q89 1820 aa37.82■■■■□ 3.64
SMAD4-213ENST00000591914 CSB-PGBD3P0DP91 1061 aa37.81■■■■□ 3.64
SMAD4-213ENST00000591914 CARD10Q9BWT7 1032 aa37.81■■■■□ 3.64
SMAD4-213ENST00000591914 WNK3Q9BYP7 1800 aa37.81■■■■□ 3.64
SMAD4-213ENST00000591914 ERBB3P21860 1342 aa37.8■■■■□ 3.64
SMAD4-213ENST00000591914 NSD3Q9BZ95 1437 aa37.79■■■■□ 3.64
SMAD4-213ENST00000591914 GGNBP2Q9H3C7 697 aa37.79■■■■□ 3.64
SMAD4-213ENST00000591914 PDE3BQ13370 1112 aa37.78■■■■□ 3.64
SMAD4-213ENST00000591914 SF3B2Q13435 895 aaKnown RBP37.77■■■■□ 3.64
SMAD4-213ENST00000591914 LRRC37A3O60309 1634 aa37.76■■■■□ 3.64
SMAD4-213ENST00000591914 IP6K1Q92551 441 aa37.75■■■■□ 3.63
SMAD4-213ENST00000591914 POLR3GLQ9BT43 218 aa37.75■■■■□ 3.63
SMAD4-213ENST00000591914 MAP3K19Q56UN5 1328 aa37.75■■■■□ 3.63
SMAD4-213ENST00000591914 RGPD1P0DJD0 1748 aa37.75■■■■□ 3.63
SMAD4-213ENST00000591914 FAM196AQ6ZSG2 479 aa37.74■■■■□ 3.63
SMAD4-213ENST00000591914 CCDC7Q96M83 1385 aa37.74■■■■□ 3.63
SMAD4-213ENST00000591914 DISP2A7MBM2 1401 aa37.73■■■■□ 3.63
SMAD4-213ENST00000591914 CDCA7Q9BWT1 371 aaPredicted RBP37.73■■■■□ 3.63
SMAD4-213ENST00000591914 FBLN1P23142 703 aa37.72■■■■□ 3.63
SMAD4-213ENST00000591914 ANKRD24Q8TF21 1146 aa37.72■■■■□ 3.63
SMAD4-213ENST00000591914 DEFB132Q7Z7B7 95 aa37.71■■■■□ 3.63
SMAD4-213ENST00000591914 C11orf95C9JLR9 678 aaPredicted RBP37.69■■■■□ 3.62
SMAD4-213ENST00000591914 TNS1Q9HBL0 1735 aaKnown RBP37.69■■■■□ 3.62
SMAD4-213ENST00000591914 DDB1Q16531 1140 aa37.68■■■■□ 3.62
SMAD4-213ENST00000591914 HOXC9P31274 260 aa37.67■■■■□ 3.62
SMAD4-213ENST00000591914 NLRP2Q9NX02 1062 aa37.67■■■■□ 3.62
SMAD4-213ENST00000591914 RTL1A6NKG5 1358 aa37.67■■■■□ 3.62
SMAD4-213ENST00000591914 FAM208AQ9UK61 1670 aaKnown RBP37.66■■■■□ 3.62
SMAD4-213ENST00000591914 PEAK1Q9H792 1746 aa37.65■■■■□ 3.62
SMAD4-213ENST00000591914 AMPHP49418 695 aa37.65■■■■□ 3.62
SMAD4-213ENST00000591914 CGNL1Q0VF96 1302 aa37.64■■■■□ 3.62
SMAD4-213ENST00000591914 RRS1Q15050 365 aaKnown RBP37.64■■■■□ 3.62
SMAD4-213ENST00000591914 BAG6P46379 1132 aa37.63■■■■□ 3.61
SMAD4-213ENST00000591914 OVOS2A0A0G2JMS6 1433 aa37.62■■■■□ 3.61
SMAD4-213ENST00000591914 TRIM37O94972 964 aa37.61■■■■□ 3.61
SMAD4-213ENST00000591914 LTV1Q96GA3 475 aaPredicted RBP37.58■■■■□ 3.61
SMAD4-213ENST00000591914 PANK3Q9H999 370 aa37.58■■■■□ 3.61
SMAD4-213ENST00000591914 TNS2Q63HR2 1409 aa37.57■■■■□ 3.6
SMAD4-213ENST00000591914 KIF24Q5T7B8 1368 aa37.56■■■■□ 3.6
SMAD4-213ENST00000591914 MARCH10Q8NA82 808 aaPredicted RBP37.56■■■■□ 3.6
SMAD4-213ENST00000591914 EXOC5O00471 708 aa37.55■■■■□ 3.6
SMAD4-213ENST00000591914 IL2RBP14784 551 aa37.55■■■■□ 3.6
SMAD4-213ENST00000591914 ANKRD26Q9UPS8 1709 aa37.54■■■■□ 3.6
SMAD4-213ENST00000591914 KIF7Q2M1P5 1343 aa37.54■■■■□ 3.6
SMAD4-213ENST00000591914 BCL9O00512 1426 aa37.53■■■■□ 3.6
SMAD4-213ENST00000591914 EN1Q05925 392 aaPredicted RBP37.53■■■■□ 3.6
SMAD4-213ENST00000591914 FLT4P35916 1363 aa37.53■■■■□ 3.6
SMAD4-213ENST00000591914 SBF2Q86WG5 1849 aa37.51■■■■□ 3.6
SMAD4-213ENST00000591914 INSRP06213 1382 aa37.51■■■■□ 3.59
SMAD4-213ENST00000591914 RGPD2P0DJD1 1756 aa37.5■■■■□ 3.59
SMAD4-213ENST00000591914 APBA3O96018 575 aa37.48■■■■□ 3.59
SMAD4-213ENST00000591914 HSP90AB2PQ58FF8 381 aa37.48■■■■□ 3.59
SMAD4-213ENST00000591914 EMILIN1Q9Y6C2 1016 aa37.48■■■■□ 3.59
SMAD4-213ENST00000591914 SMG6Q86US8 1419 aaKnown RBP37.47■■■■□ 3.59
SMAD4-213ENST00000591914 CAMKK2Q96RR4 588 aa37.46■■■■□ 3.59
SMAD4-213ENST00000591914 NSD2O96028 1365 aa37.45■■■■□ 3.59
SMAD4-213ENST00000591914 PARD3Q8TEW0 1356 aa37.43■■■■□ 3.58
SMAD4-213ENST00000591914 MAP2P11137 1827 aaKnown RBP37.43■■■■□ 3.58
SMAD4-213ENST00000591914 EZH2Q15910 746 aaKnown RBP37.43■■■■□ 3.58
SMAD4-213ENST00000591914 NBPF6Q5VWK0 638 aa37.42■■■■□ 3.58
SMAD4-213ENST00000591914 NBPF4Q96M43 638 aa37.42■■■■□ 3.58
SMAD4-213ENST00000591914 BCL11BQ9C0K0 894 aaPredicted RBP37.39■■■■□ 3.58
SMAD4-213ENST00000591914 POLKQ9UBT6 870 aa37.39■■■■□ 3.58
SMAD4-213ENST00000591914 WASHC2AQ641Q2 1341 aa37.37■■■■□ 3.57
SMAD4-213ENST00000591914 KNSTRNQ9Y448 316 aa37.37■■■■□ 3.57
SMAD4-213ENST00000591914 RREB1Q92766 1687 aa37.37■■■■□ 3.57
SMAD4-213ENST00000591914 MEGF6O75095 1541 aa37.36■■■■□ 3.57
SMAD4-213ENST00000591914 PPM1GO15355 546 aaPredicted RBP37.36■■■■□ 3.57
SMAD4-213ENST00000591914 PTF1AQ7RTS3 328 aa37.36■■■■□ 3.57
SMAD4-213ENST00000591914 TNNT2P45379 298 aaPredicted RBP37.35■■■■□ 3.57
SMAD4-213ENST00000591914 RGPD3A6NKT7 1758 aaPredicted RBP37.34■■■■□ 3.57
SMAD4-213ENST00000591914 RGPD4Q7Z3J3 1758 aa37.34■■■■□ 3.57
SMAD4-213ENST00000591914 USHBP1Q8N6Y0 703 aa37.34■■■■□ 3.57
SMAD4-213ENST00000591914 NHSQ6T4R5 1651 aa37.31■■■■□ 3.56
SMAD4-213ENST00000591914 SHANK3Q9BYB0 1731 aa37.3■■■■□ 3.56
SMAD4-213ENST00000591914 PLSCR1O15162 318 aa37.3■■■■□ 3.56
SMAD4-213ENST00000591914 AMER1Q5JTC6 1135 aaPredicted RBP37.3■■■■□ 3.56
SMAD4-213ENST00000591914 NUP188Q5SRE5 1749 aa37.3■■■■□ 3.56
SMAD4-213ENST00000591914 NCAPD2Q15021 1401 aa37.29■■■■□ 3.56
SMAD4-213ENST00000591914 SRCAPQ6ZRS2 3230 aa37.29■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms