RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 CD163L1Q9NR16 1453 aa29.88■■■□□ 2.37
R3HDM4-206ENST00000590454 GCP02774 474 aa29.88■■■□□ 2.37
R3HDM4-206ENST00000590454 POLR3GLQ9BT43 218 aa29.87■■■□□ 2.37
R3HDM4-206ENST00000590454 LMO7Q8WWI1 1683 aa29.86■■■□□ 2.37
R3HDM4-206ENST00000590454 CDCA8Q53HL2 280 aa29.86■■■□□ 2.37
R3HDM4-206ENST00000590454 MYOM1P52179 1685 aa29.85■■■□□ 2.37
R3HDM4-206ENST00000590454 AKAP12Q02952 1782 aa29.85■■■□□ 2.37
R3HDM4-206ENST00000590454 NINLQ9Y2I6 1382 aa29.84■■■□□ 2.37
R3HDM4-206ENST00000590454 CPSF1Q10570 1443 aaKnown RBP29.84■■■□□ 2.37
R3HDM4-206ENST00000590454 COL5A2P05997 1499 aaPredicted RBP29.82■■■□□ 2.36
R3HDM4-206ENST00000590454 PLSCR1O15162 318 aa29.82■■■□□ 2.36
R3HDM4-206ENST00000590454 USP6P35125 1406 aa29.81■■■□□ 2.36
R3HDM4-206ENST00000590454 CRB1P82279 1406 aa29.81■■■□□ 2.36
R3HDM4-206ENST00000590454 KIF7Q2M1P5 1343 aa29.81■■■□□ 2.36
R3HDM4-206ENST00000590454 OVOS2A0A0G2JMS6 1433 aa29.8■■■□□ 2.36
R3HDM4-206ENST00000590454 OVOS2A0A0J9YW53 1432 aa29.8■■■□□ 2.36
R3HDM4-206ENST00000590454 OVOS2Q6IE36 1432 aa29.8■■■□□ 2.36
R3HDM4-206ENST00000590454 PARP4Q9UKK3 1724 aaKnown RBP29.79■■■□□ 2.36
R3HDM4-206ENST00000590454 A0A1W2PP64 1363 aa29.79■■■□□ 2.36
R3HDM4-206ENST00000590454 BRD4O60885 1362 aaPredicted RBP29.77■■■□□ 2.36
R3HDM4-206ENST00000590454 KTN1Q86UP2 1357 aaKnown RBP29.77■■■□□ 2.36
R3HDM4-206ENST00000590454 MON2Q7Z3U7 1717 aa29.77■■■□□ 2.36
R3HDM4-206ENST00000590454 DDB1Q16531 1140 aa29.77■■■□□ 2.36
R3HDM4-206ENST00000590454 ZBTB7CA1YPR0 619 aa29.76■■■□□ 2.35
R3HDM4-206ENST00000590454 WASHC2AQ641Q2 1341 aa29.75■■■□□ 2.35
R3HDM4-206ENST00000590454 ZNF692Q9BU19 519 aaPredicted RBP29.75■■■□□ 2.35
R3HDM4-206ENST00000590454 HDGFL2Q7Z4V5 671 aaPredicted RBP29.74■■■□□ 2.35
R3HDM4-206ENST00000590454 BCL11BQ9C0K0 894 aaPredicted RBP29.74■■■□□ 2.35
R3HDM4-206ENST00000590454 TERF2IPQ9NYB0 399 aa29.74■■■□□ 2.35
R3HDM4-206ENST00000590454 AATKQ6ZMQ8 1374 aa29.74■■■□□ 2.35
R3HDM4-206ENST00000590454 NLRP6P59044 892 aa29.73■■■□□ 2.35
R3HDM4-206ENST00000590454 TOM1L2Q6ZVM7 507 aa29.73■■■□□ 2.35
R3HDM4-206ENST00000590454 ANKRD36BQ8N2N9 1353 aa29.73■■■□□ 2.35
R3HDM4-206ENST00000590454 CCDC7Q96M83 1385 aa29.73■■■□□ 2.35
R3HDM4-206ENST00000590454 TTC21BQ7Z4L5 1316 aa29.71■■■□□ 2.35
R3HDM4-206ENST00000590454 ANO8Q9HCE9 1232 aaPredicted RBP29.71■■■□□ 2.35
R3HDM4-206ENST00000590454 PEAK1Q9H792 1746 aa29.71■■■□□ 2.35
R3HDM4-206ENST00000590454 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.69■■■□□ 2.34
R3HDM4-206ENST00000590454 CARD14Q9BXL6 1004 aa29.69■■■□□ 2.34
R3HDM4-206ENST00000590454 RGPD3A6NKT7 1758 aaPredicted RBP29.69■■■□□ 2.34
R3HDM4-206ENST00000590454 RGPD4Q7Z3J3 1758 aa29.69■■■□□ 2.34
R3HDM4-206ENST00000590454 CDCA7Q9BWT1 371 aaPredicted RBP29.68■■■□□ 2.34
R3HDM4-206ENST00000590454 PIK3C2AO00443 1686 aa29.67■■■□□ 2.34
R3HDM4-206ENST00000590454 PTF1AQ7RTS3 328 aa29.67■■■□□ 2.34
R3HDM4-206ENST00000590454 EDC4Q6P2E9 1401 aaKnown RBP29.67■■■□□ 2.34
R3HDM4-206ENST00000590454 PROM2Q8N271 834 aa29.66■■■□□ 2.34
R3HDM4-206ENST00000590454 LRRC37A3O60309 1634 aa29.65■■■□□ 2.34
R3HDM4-206ENST00000590454 MARCH10Q8NA82 808 aaPredicted RBP29.65■■■□□ 2.34
R3HDM4-206ENST00000590454 WDR17Q8IZU2 1322 aa29.65■■■□□ 2.34
R3HDM4-206ENST00000590454 ZBTB7AO95365 584 aa29.64■■■□□ 2.34
R3HDM4-206ENST00000590454 PDGFDQ9GZP0 370 aaPredicted RBP29.64■■■□□ 2.34
R3HDM4-206ENST00000590454 PANK3Q9H999 370 aa29.64■■■□□ 2.34
R3HDM4-206ENST00000590454 SLIT3O75094 1523 aa29.64■■■□□ 2.34
R3HDM4-206ENST00000590454 BCL9O00512 1426 aa29.63■■■□□ 2.33
R3HDM4-206ENST00000590454 NME9Q86XW9 330 aa29.63■■■□□ 2.33
R3HDM4-206ENST00000590454 AXIN2Q9Y2T1 843 aa29.63■■■□□ 2.33
R3HDM4-206ENST00000590454 TTC21AQ8NDW8 1320 aa29.62■■■□□ 2.33
R3HDM4-206ENST00000590454 SBF2Q86WG5 1849 aa29.61■■■□□ 2.33
R3HDM4-206ENST00000590454 CASZ1Q86V15 1759 aa29.61■■■□□ 2.33
R3HDM4-206ENST00000590454 NSD3Q9BZ95 1437 aa29.61■■■□□ 2.33
R3HDM4-206ENST00000590454 STK32BQ9NY57 414 aa29.6■■■□□ 2.33
R3HDM4-206ENST00000590454 PTGER2P43116 358 aa29.59■■■□□ 2.33
R3HDM4-206ENST00000590454 ATF5Q9Y2D1 282 aaPredicted RBP29.59■■■□□ 2.33
R3HDM4-206ENST00000590454 TXNRD1Q16881 649 aa29.58■■■□□ 2.33
R3HDM4-206ENST00000590454 CSB-PGBD3P0DP91 1061 aa29.57■■■□□ 2.32
R3HDM4-206ENST00000590454 ARHGEF25Q86VW2 580 aa29.57■■■□□ 2.32
R3HDM4-206ENST00000590454 KCNH5Q8NCM2 988 aa29.57■■■□□ 2.32
R3HDM4-206ENST00000590454 CARD10Q9BWT7 1032 aa29.57■■■□□ 2.32
R3HDM4-206ENST00000590454 EXOC5O00471 708 aa29.56■■■□□ 2.32
R3HDM4-206ENST00000590454 SLC15A2Q16348 729 aa29.56■■■□□ 2.32
R3HDM4-206ENST00000590454 COL18A1P39060 1754 aa29.55■■■□□ 2.32
R3HDM4-206ENST00000590454 USP31Q70CQ4 1352 aa29.53■■■□□ 2.32
R3HDM4-206ENST00000590454 FYB1O15117 783 aa29.53■■■□□ 2.32
R3HDM4-206ENST00000590454 ZNF784Q8NCA9 323 aaPredicted RBP29.53■■■□□ 2.32
R3HDM4-206ENST00000590454 SYT17Q9BSW7 474 aa29.53■■■□□ 2.32
R3HDM4-206ENST00000590454 FHDC1Q9C0D6 1143 aaPredicted RBP29.52■■■□□ 2.32
R3HDM4-206ENST00000590454 USP54Q70EL1 1684 aa29.51■■■□□ 2.31
R3HDM4-206ENST00000590454 MTFR1LQ9H019 292 aa29.51■■■□□ 2.31
R3HDM4-206ENST00000590454 GGNBP2Q9H3C7 697 aa29.51■■■□□ 2.31
R3HDM4-206ENST00000590454 KIF20BQ96Q89 1820 aa29.5■■■□□ 2.31
R3HDM4-206ENST00000590454 SOX12O15370 315 aa29.49■■■□□ 2.31
R3HDM4-206ENST00000590454 WNK3Q9BYP7 1800 aa29.49■■■□□ 2.31
R3HDM4-206ENST00000590454 PER1O15534 1290 aaPredicted RBP29.47■■■□□ 2.31
R3HDM4-206ENST00000590454 SGIP1Q9BQI5 828 aa29.45■■■□□ 2.31
R3HDM4-206ENST00000590454 CGNL1Q0VF96 1302 aa29.44■■■□□ 2.3
R3HDM4-206ENST00000590454 FBLN1P23142 703 aa29.43■■■□□ 2.3
R3HDM4-206ENST00000590454 COG3Q96JB2 828 aa29.43■■■□□ 2.3
R3HDM4-206ENST00000590454 NFAT5O94916 1531 aa29.43■■■□□ 2.3
R3HDM4-206ENST00000590454 ZNF316A6NFI3 1004 aaPredicted RBP29.42■■■□□ 2.3
R3HDM4-206ENST00000590454 KNSTRNQ9Y448 316 aa29.42■■■□□ 2.3
R3HDM4-206ENST00000590454 TNS2Q63HR2 1409 aa29.41■■■□□ 2.3
R3HDM4-206ENST00000590454 ARXQ96QS3 562 aa29.41■■■□□ 2.3
R3HDM4-206ENST00000590454 AMER1Q5JTC6 1135 aaPredicted RBP29.4■■■□□ 2.3
R3HDM4-206ENST00000590454 DDX10Q13206 875 aaKnown RBP29.39■■■□□ 2.3
R3HDM4-206ENST00000590454 ACSBG1Q96GR2 724 aa29.39■■■□□ 2.3
R3HDM4-206ENST00000590454 RGPD5Q99666 1765 aa29.39■■■□□ 2.29
R3HDM4-206ENST00000590454 ABCC6O95255 1503 aa29.36■■■□□ 2.29
R3HDM4-206ENST00000590454 ANKRD26Q9UPS8 1709 aa29.36■■■□□ 2.29
R3HDM4-206ENST00000590454 NLRP2Q9NX02 1062 aa29.34■■■□□ 2.29
R3HDM4-206ENST00000590454 MAP3K5Q99683 1374 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 404.9 ms