RNA–Protein interactions for RNA: ENST00000589537.1

NFIC-208, Transcript of nuclear factor I C, humanhuman

TSL 2

Gene NFIC, Length 977 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-208ENST00000589537 USP35Q9P2H5 1018 aa23.28■■□□□ 1.32
NFIC-208ENST00000589537 COL18A1P39060 1754 aa23.27■■□□□ 1.32
NFIC-208ENST00000589537 NME9Q86XW9 330 aa23.25■■□□□ 1.31
NFIC-208ENST00000589537 WDR17Q8IZU2 1322 aa23.25■■□□□ 1.31
NFIC-208ENST00000589537 ANKRD36BQ8N2N9 1353 aa23.25■■□□□ 1.31
NFIC-208ENST00000589537 SOX12O15370 315 aa23.23■■□□□ 1.31
NFIC-208ENST00000589537 PDE3BQ13370 1112 aa23.23■■□□□ 1.31
NFIC-208ENST00000589537 OVOS2A0A0J9YW53 1432 aa23.23■■□□□ 1.31
NFIC-208ENST00000589537 OVOS2Q6IE36 1432 aa23.23■■□□□ 1.31
NFIC-208ENST00000589537 RGPD1P0DJD0 1748 aa23.22■■□□□ 1.31
NFIC-208ENST00000589537 BAG6P46379 1132 aa23.22■■□□□ 1.31
NFIC-208ENST00000589537 FAM196AQ6ZSG2 479 aa23.22■■□□□ 1.31
NFIC-208ENST00000589537 TOM1L2Q6ZVM7 507 aa23.22■■□□□ 1.31
NFIC-208ENST00000589537 PARP4Q9UKK3 1724 aaKnown RBP23.22■■□□□ 1.31
NFIC-208ENST00000589537 C11orf95C9JLR9 678 aaPredicted RBP23.21■■□□□ 1.31
NFIC-208ENST00000589537 ZRANB1Q9UGI0 708 aa23.21■■□□□ 1.31
NFIC-208ENST00000589537 AXIN2Q9Y2T1 843 aa23.21■■□□□ 1.31
NFIC-208ENST00000589537 CDCA7Q9BWT1 371 aaPredicted RBP23.2■■□□□ 1.3
NFIC-208ENST00000589537 CSB-PGBD3P0DP91 1061 aa23.18■■□□□ 1.3
NFIC-208ENST00000589537 CARD10Q9BWT7 1032 aa23.18■■□□□ 1.3
NFIC-208ENST00000589537 DISP2A7MBM2 1401 aa23.17■■□□□ 1.3
NFIC-208ENST00000589537 DEFB132Q7Z7B7 95 aa23.17■■□□□ 1.3
NFIC-208ENST00000589537 COG3Q96JB2 828 aa23.17■■□□□ 1.3
NFIC-208ENST00000589537 CCDC7Q96M83 1385 aa23.16■■□□□ 1.3
NFIC-208ENST00000589537 FAM182BQ5T319 152 aa23.15■■□□□ 1.3
NFIC-208ENST00000589537 LTN1O94822 1766 aa23.14■■□□□ 1.3
NFIC-208ENST00000589537 WNK3Q9BYP7 1800 aa23.14■■□□□ 1.29
NFIC-208ENST00000589537 ERBB3P21860 1342 aa23.13■■□□□ 1.29
NFIC-208ENST00000589537 LRRC37A3O60309 1634 aa23.13■■□□□ 1.29
NFIC-208ENST00000589537 DDB1Q16531 1140 aa23.13■■□□□ 1.29
NFIC-208ENST00000589537 RGPD5Q99666 1765 aa23.13■■□□□ 1.29
NFIC-208ENST00000589537 TNS1Q9HBL0 1735 aaKnown RBP23.13■■□□□ 1.29
NFIC-208ENST00000589537 OVOS2A0A0G2JMS6 1433 aa23.12■■□□□ 1.29
NFIC-208ENST00000589537 EIF4G2P78344 907 aaKnown RBP eCLIP23.1■■□□□ 1.29
NFIC-208ENST00000589537 PARD3Q8TEW0 1356 aa23.1■■□□□ 1.29
NFIC-208ENST00000589537 TRIM37O94972 964 aa23.09■■□□□ 1.29
NFIC-208ENST00000589537 MYOM1P52179 1685 aa23.09■■□□□ 1.29
NFIC-208ENST00000589537 IP6K1Q92551 441 aa23.08■■□□□ 1.29
NFIC-208ENST00000589537 ANKRD24Q8TF21 1146 aa23.07■■□□□ 1.28
NFIC-208ENST00000589537 FAM208AQ9UK61 1670 aaKnown RBP23.06■■□□□ 1.28
NFIC-208ENST00000589537 RTL1A6NKG5 1358 aa23.06■■□□□ 1.28
NFIC-208ENST00000589537 FYB1O15117 783 aa23.06■■□□□ 1.28
NFIC-208ENST00000589537 EN1Q05925 392 aaPredicted RBP23.06■■□□□ 1.28
NFIC-208ENST00000589537 NLRP2Q9NX02 1062 aa23.06■■□□□ 1.28
NFIC-208ENST00000589537 BCL9O00512 1426 aa23.06■■□□□ 1.28
NFIC-208ENST00000589537 PEAK1Q9H792 1746 aa23.05■■□□□ 1.28
NFIC-208ENST00000589537 TNS2Q63HR2 1409 aa23.05■■□□□ 1.28
NFIC-208ENST00000589537 EXOC5O00471 708 aa23.04■■□□□ 1.28
NFIC-208ENST00000589537 APBA3O96018 575 aa23.04■■□□□ 1.28
NFIC-208ENST00000589537 MAP3K19Q56UN5 1328 aa23.04■■□□□ 1.28
NFIC-208ENST00000589537 KIF20BQ96Q89 1820 aa23.03■■□□□ 1.28
NFIC-208ENST00000589537 AMPHP49418 695 aa23.03■■□□□ 1.28
NFIC-208ENST00000589537 NSD3Q9BZ95 1437 aa23.02■■□□□ 1.28
NFIC-208ENST00000589537 GGNBP2Q9H3C7 697 aa23.02■■□□□ 1.28
NFIC-208ENST00000589537 HSPA5P11021 654 aaKnown RBP23.01■■□□□ 1.27
NFIC-208ENST00000589537 IL2RBP14784 551 aa23.01■■□□□ 1.27
NFIC-208ENST00000589537 HOXC9P31274 260 aa23.01■■□□□ 1.27
NFIC-208ENST00000589537 CAMKK2Q96RR4 588 aa23.01■■□□□ 1.27
NFIC-208ENST00000589537 KIF24Q5T7B8 1368 aa23.01■■□□□ 1.27
NFIC-208ENST00000589537 EZH2Q15910 746 aaKnown RBP22.99■■□□□ 1.27
NFIC-208ENST00000589537 MARCH10Q8NA82 808 aaPredicted RBP22.99■■□□□ 1.27
NFIC-208ENST00000589537 CARD14Q9BXL6 1004 aa22.99■■□□□ 1.27
NFIC-208ENST00000589537 CGNL1Q0VF96 1302 aa22.99■■□□□ 1.27
NFIC-208ENST00000589537 SMG6Q86US8 1419 aaKnown RBP22.98■■□□□ 1.27
NFIC-208ENST00000589537 RGPD3A6NKT7 1758 aaPredicted RBP22.97■■□□□ 1.27
NFIC-208ENST00000589537 RGPD4Q7Z3J3 1758 aa22.97■■□□□ 1.27
NFIC-208ENST00000589537 BCL11BQ9C0K0 894 aaPredicted RBP22.97■■□□□ 1.27
NFIC-208ENST00000589537 RREB1Q92766 1687 aa22.96■■□□□ 1.27
NFIC-208ENST00000589537 SBF2Q86WG5 1849 aa22.95■■□□□ 1.26
NFIC-208ENST00000589537 LTV1Q96GA3 475 aaPredicted RBP22.95■■□□□ 1.26
NFIC-208ENST00000589537 POLR3GLQ9BT43 218 aa22.95■■□□□ 1.26
NFIC-208ENST00000589537 FLT4P35916 1363 aa22.94■■□□□ 1.26
NFIC-208ENST00000589537 RRS1Q15050 365 aaKnown RBP22.94■■□□□ 1.26
NFIC-208ENST00000589537 PLSCR1O15162 318 aa22.93■■□□□ 1.26
NFIC-208ENST00000589537 INSRP06213 1382 aa22.92■■□□□ 1.26
NFIC-208ENST00000589537 FBLN1P23142 703 aa22.92■■□□□ 1.26
NFIC-208ENST00000589537 NBPF14Q5TI25 921 aa22.91■■□□□ 1.26
NFIC-208ENST00000589537 NUP188Q5SRE5 1749 aa22.89■■□□□ 1.26
NFIC-208ENST00000589537 NHSQ6T4R5 1651 aa22.88■■□□□ 1.25
NFIC-208ENST00000589537 PSDA5PKW4 1024 aaPredicted RBP22.88■■□□□ 1.25
NFIC-208ENST00000589537 LRP5O75197 1615 aa22.88■■□□□ 1.25
NFIC-208ENST00000589537 NSD2O96028 1365 aa22.88■■□□□ 1.25
NFIC-208ENST00000589537 R3HDM1Q15032 1099 aaKnown RBP22.87■■□□□ 1.25
NFIC-208ENST00000589537 ANKRD26Q9UPS8 1709 aa22.86■■□□□ 1.25
NFIC-208ENST00000589537 HSP90AB2PQ58FF8 381 aa22.85■■□□□ 1.25
NFIC-208ENST00000589537 PANK3Q9H999 370 aa22.85■■□□□ 1.25
NFIC-208ENST00000589537 NBPF6Q5VWK0 638 aa22.84■■□□□ 1.25
NFIC-208ENST00000589537 NBPF4Q96M43 638 aa22.84■■□□□ 1.25
NFIC-208ENST00000589537 SRCAPQ6ZRS2 3230 aa22.83■■□□□ 1.25
NFIC-208ENST00000589537 RAPGEF4Q8WZA2 1011 aa22.83■■□□□ 1.25
NFIC-208ENST00000589537 EMILIN1Q9Y6C2 1016 aa22.83■■□□□ 1.25
NFIC-208ENST00000589537 MEGF6O75095 1541 aa22.82■■□□□ 1.24
NFIC-208ENST00000589537 RGPD2P0DJD1 1756 aa22.82■■□□□ 1.24
NFIC-208ENST00000589537 ZCRB1Q8TBF4 217 aaKnown RBP22.82■■□□□ 1.24
NFIC-208ENST00000589537 WASHC2AQ641Q2 1341 aa22.82■■□□□ 1.24
NFIC-208ENST00000589537 PTF1AQ7RTS3 328 aa22.81■■□□□ 1.24
NFIC-208ENST00000589537 DDX54Q8TDD1 881 aaKnown RBP22.81■■□□□ 1.24
NFIC-208ENST00000589537 PPM1GO15355 546 aaPredicted RBP22.79■■□□□ 1.24
NFIC-208ENST00000589537 KCNQ2O43526 872 aa22.79■■□□□ 1.24
NFIC-208ENST00000589537 TATP17735 454 aaPredicted RBP22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms