RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 NFAT5O94916 1531 aa32.65■■■□□ 2.82
LSM7-204ENST00000587502 USP54Q70EL1 1684 aa32.65■■■□□ 2.82
LSM7-204ENST00000587502 COL18A1P39060 1754 aa32.65■■■□□ 2.82
LSM7-204ENST00000587502 PDE3BQ13370 1112 aa32.64■■■□□ 2.82
LSM7-204ENST00000587502 TOM1L2Q6ZVM7 507 aa32.64■■■□□ 2.82
LSM7-204ENST00000587502 AXIN2Q9Y2T1 843 aa32.64■■■□□ 2.82
LSM7-204ENST00000587502 WDR17Q8IZU2 1322 aa32.63■■■□□ 2.81
LSM7-204ENST00000587502 FAM196AQ6ZSG2 479 aa32.63■■■□□ 2.81
LSM7-204ENST00000587502 ZRANB1Q9UGI0 708 aa32.63■■■□□ 2.81
LSM7-204ENST00000587502 ABCC6O95255 1503 aa32.62■■■□□ 2.81
LSM7-204ENST00000587502 BAG6P46379 1132 aa32.6■■■□□ 2.81
LSM7-204ENST00000587502 ANKRD36BQ8N2N9 1353 aa32.59■■■□□ 2.81
LSM7-204ENST00000587502 FAM182BQ5T319 152 aa32.59■■■□□ 2.81
LSM7-204ENST00000587502 DEFB132Q7Z7B7 95 aa32.59■■■□□ 2.81
LSM7-204ENST00000587502 CSB-PGBD3P0DP91 1061 aa32.58■■■□□ 2.81
LSM7-204ENST00000587502 C11orf95C9JLR9 678 aaPredicted RBP32.56■■■□□ 2.8
LSM7-204ENST00000587502 CDCA7Q9BWT1 371 aaPredicted RBP32.56■■■□□ 2.8
LSM7-204ENST00000587502 CARD10Q9BWT7 1032 aa32.55■■■□□ 2.8
LSM7-204ENST00000587502 RGPD1P0DJD0 1748 aa32.54■■■□□ 2.8
LSM7-204ENST00000587502 OVOS2A0A0J9YW53 1432 aa32.54■■■□□ 2.8
LSM7-204ENST00000587502 OVOS2Q6IE36 1432 aa32.54■■■□□ 2.8
LSM7-204ENST00000587502 PARP4Q9UKK3 1724 aaKnown RBP32.54■■■□□ 2.8
LSM7-204ENST00000587502 COG3Q96JB2 828 aa32.53■■■□□ 2.8
LSM7-204ENST00000587502 RGPD5Q99666 1765 aa32.51■■■□□ 2.79
LSM7-204ENST00000587502 DDB1Q16531 1140 aa32.49■■■□□ 2.79
LSM7-204ENST00000587502 CCDC7Q96M83 1385 aa32.48■■■□□ 2.79
LSM7-204ENST00000587502 DISP2A7MBM2 1401 aa32.48■■■□□ 2.79
LSM7-204ENST00000587502 TRIM37O94972 964 aa32.47■■■□□ 2.79
LSM7-204ENST00000587502 LTN1O94822 1766 aa32.46■■■□□ 2.79
LSM7-204ENST00000587502 ERBB3P21860 1342 aa32.46■■■□□ 2.79
LSM7-204ENST00000587502 EIF4G2P78344 907 aaKnown RBP eCLIP32.43■■■□□ 2.78
LSM7-204ENST00000587502 EN1Q05925 392 aaPredicted RBP32.43■■■□□ 2.78
LSM7-204ENST00000587502 IP6K1Q92551 441 aa32.42■■■□□ 2.78
LSM7-204ENST00000587502 OVOS2A0A0G2JMS6 1433 aa32.42■■■□□ 2.78
LSM7-204ENST00000587502 TNS1Q9HBL0 1735 aaKnown RBP32.41■■■□□ 2.78
LSM7-204ENST00000587502 FYB1O15117 783 aa32.41■■■□□ 2.78
LSM7-204ENST00000587502 ANKRD24Q8TF21 1146 aa32.41■■■□□ 2.78
LSM7-204ENST00000587502 NLRP2Q9NX02 1062 aa32.41■■■□□ 2.78
LSM7-204ENST00000587502 APBA3O96018 575 aa32.4■■■□□ 2.78
LSM7-204ENST00000587502 LRRC37A3O60309 1634 aa32.4■■■□□ 2.78
LSM7-204ENST00000587502 WNK3Q9BYP7 1800 aa32.4■■■□□ 2.78
LSM7-204ENST00000587502 PARD3Q8TEW0 1356 aa32.38■■■□□ 2.77
LSM7-204ENST00000587502 EXOC5O00471 708 aa32.38■■■□□ 2.77
LSM7-204ENST00000587502 AMPHP49418 695 aa32.36■■■□□ 2.77
LSM7-204ENST00000587502 GGNBP2Q9H3C7 697 aa32.36■■■□□ 2.77
LSM7-204ENST00000587502 MAP3K19Q56UN5 1328 aa32.35■■■□□ 2.77
LSM7-204ENST00000587502 CAMKK2Q96RR4 588 aa32.35■■■□□ 2.77
LSM7-204ENST00000587502 HSPA5P11021 654 aaKnown RBP32.33■■■□□ 2.77
LSM7-204ENST00000587502 EZH2Q15910 746 aaKnown RBP32.33■■■□□ 2.77
LSM7-204ENST00000587502 BCL9O00512 1426 aa32.33■■■□□ 2.77
LSM7-204ENST00000587502 MYOM1P52179 1685 aa32.32■■■□□ 2.76
LSM7-204ENST00000587502 IL2RBP14784 551 aa32.32■■■□□ 2.76
LSM7-204ENST00000587502 HOXC9P31274 260 aa32.32■■■□□ 2.76
LSM7-204ENST00000587502 MARCH10Q8NA82 808 aaPredicted RBP32.32■■■□□ 2.76
LSM7-204ENST00000587502 PEAK1Q9H792 1746 aa32.31■■■□□ 2.76
LSM7-204ENST00000587502 CARD14Q9BXL6 1004 aa32.31■■■□□ 2.76
LSM7-204ENST00000587502 RTL1A6NKG5 1358 aa32.31■■■□□ 2.76
LSM7-204ENST00000587502 SRCAPQ6ZRS2 3230 aa32.3■■■□□ 2.76
LSM7-204ENST00000587502 NSD3Q9BZ95 1437 aa32.29■■■□□ 2.76
LSM7-204ENST00000587502 KIF20BQ96Q89 1820 aa32.28■■■□□ 2.76
LSM7-204ENST00000587502 TNS2Q63HR2 1409 aa32.28■■■□□ 2.76
LSM7-204ENST00000587502 LTV1Q96GA3 475 aaPredicted RBP32.28■■■□□ 2.76
LSM7-204ENST00000587502 POLR3GLQ9BT43 218 aa32.28■■■□□ 2.76
LSM7-204ENST00000587502 FAM208AQ9UK61 1670 aaKnown RBP32.27■■■□□ 2.76
LSM7-204ENST00000587502 BCL11BQ9C0K0 894 aaPredicted RBP32.27■■■□□ 2.76
LSM7-204ENST00000587502 FBLN1P23142 703 aa32.26■■■□□ 2.75
LSM7-204ENST00000587502 RRS1Q15050 365 aaKnown RBP32.25■■■□□ 2.75
LSM7-204ENST00000587502 CGNL1Q0VF96 1302 aa32.25■■■□□ 2.75
LSM7-204ENST00000587502 SBF2Q86WG5 1849 aa32.23■■■□□ 2.75
LSM7-204ENST00000587502 KIF24Q5T7B8 1368 aa32.23■■■□□ 2.75
LSM7-204ENST00000587502 PLSCR1O15162 318 aa32.22■■■□□ 2.75
LSM7-204ENST00000587502 SMG6Q86US8 1419 aaKnown RBP32.19■■■□□ 2.74
LSM7-204ENST00000587502 PSDA5PKW4 1024 aaPredicted RBP32.19■■■□□ 2.74
LSM7-204ENST00000587502 NBPF14Q5TI25 921 aa32.19■■■□□ 2.74
LSM7-204ENST00000587502 FLT4P35916 1363 aa32.18■■■□□ 2.74
LSM7-204ENST00000587502 RREB1Q92766 1687 aa32.16■■■□□ 2.74
LSM7-204ENST00000587502 R3HDM1Q15032 1099 aaKnown RBP32.16■■■□□ 2.74
LSM7-204ENST00000587502 INSRP06213 1382 aa32.16■■■□□ 2.74
LSM7-204ENST00000587502 RGPD3A6NKT7 1758 aaPredicted RBP32.14■■■□□ 2.74
LSM7-204ENST00000587502 RGPD4Q7Z3J3 1758 aa32.14■■■□□ 2.74
LSM7-204ENST00000587502 HSP90AB2PQ58FF8 381 aa32.12■■■□□ 2.73
LSM7-204ENST00000587502 PANK3Q9H999 370 aa32.12■■■□□ 2.73
LSM7-204ENST00000587502 NUP188Q5SRE5 1749 aa32.1■■■□□ 2.73
LSM7-204ENST00000587502 NBPF6Q5VWK0 638 aa32.1■■■□□ 2.73
LSM7-204ENST00000587502 PTF1AQ7RTS3 328 aa32.1■■■□□ 2.73
LSM7-204ENST00000587502 NBPF4Q96M43 638 aa32.1■■■□□ 2.73
LSM7-204ENST00000587502 DDX54Q8TDD1 881 aaKnown RBP32.08■■■□□ 2.73
LSM7-204ENST00000587502 ZCRB1Q8TBF4 217 aaKnown RBP32.07■■■□□ 2.72
LSM7-204ENST00000587502 EMILIN1Q9Y6C2 1016 aa32.07■■■□□ 2.72
LSM7-204ENST00000587502 KCNQ2O43526 872 aa32.06■■■□□ 2.72
LSM7-204ENST00000587502 RAPGEF4Q8WZA2 1011 aa32.06■■■□□ 2.72
LSM7-204ENST00000587502 ACSBG1Q96GR2 724 aa32.06■■■□□ 2.72
LSM7-204ENST00000587502 RGPD2P0DJD1 1756 aa32.06■■■□□ 2.72
LSM7-204ENST00000587502 NHSQ6T4R5 1651 aa32.05■■■□□ 2.72
LSM7-204ENST00000587502 LRP5O75197 1615 aa32.05■■■□□ 2.72
LSM7-204ENST00000587502 PPM1GO15355 546 aaPredicted RBP32.05■■■□□ 2.72
LSM7-204ENST00000587502 NSD2O96028 1365 aa32.04■■■□□ 2.72
LSM7-204ENST00000587502 WASHC2AQ641Q2 1341 aa32.03■■■□□ 2.72
LSM7-204ENST00000587502 TATP17735 454 aaPredicted RBP32.02■■■□□ 2.72
LSM7-204ENST00000587502 MEGF6O75095 1541 aa32.01■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms