RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 COG3Q96JB2 828 aa28.17■■■□□ 2.1
VAT1-203ENST00000587062 CRB1P82279 1406 aa28.17■■■□□ 2.1
VAT1-203ENST00000587062 PDE3BQ13370 1112 aa28.16■■■□□ 2.1
VAT1-203ENST00000587062 BLMP54132 1417 aaPredicted RBP28.16■■■□□ 2.1
VAT1-203ENST00000587062 ZRANB1Q9UGI0 708 aa28.15■■■□□ 2.1
VAT1-203ENST00000587062 WDR17Q8IZU2 1322 aa28.14■■■□□ 2.09
VAT1-203ENST00000587062 USP54Q70EL1 1684 aa28.13■■■□□ 2.09
VAT1-203ENST00000587062 AXIN2Q9Y2T1 843 aa28.12■■■□□ 2.09
VAT1-203ENST00000587062 THSD7AQ9UPZ6 1657 aa28.11■■■□□ 2.09
VAT1-203ENST00000587062 CDCA7Q9BWT1 371 aaPredicted RBP28.11■■■□□ 2.09
VAT1-203ENST00000587062 NFAT5O94916 1531 aa28.11■■■□□ 2.09
VAT1-203ENST00000587062 ABCC6O95255 1503 aa28.11■■■□□ 2.09
VAT1-203ENST00000587062 C11orf95C9JLR9 678 aaPredicted RBP28.1■■■□□ 2.09
VAT1-203ENST00000587062 FAM196AQ6ZSG2 479 aa28.1■■■□□ 2.09
VAT1-203ENST00000587062 COL18A1P39060 1754 aa28.09■■■□□ 2.09
VAT1-203ENST00000587062 HSPA5P11021 654 aaKnown RBP28.08■■■□□ 2.09
VAT1-203ENST00000587062 POLR3GLQ9BT43 218 aa28.08■■■□□ 2.09
VAT1-203ENST00000587062 OVOS2A0A0J9YW53 1432 aa28.08■■■□□ 2.09
VAT1-203ENST00000587062 OVOS2Q6IE36 1432 aa28.08■■■□□ 2.09
VAT1-203ENST00000587062 CARD10Q9BWT7 1032 aa28.07■■■□□ 2.08
VAT1-203ENST00000587062 BAG6P46379 1132 aa28.06■■■□□ 2.08
VAT1-203ENST00000587062 CCDC7Q96M83 1385 aa28.03■■■□□ 2.08
VAT1-203ENST00000587062 FYB1O15117 783 aa28.03■■■□□ 2.08
VAT1-203ENST00000587062 DDB1Q16531 1140 aa28.03■■■□□ 2.08
VAT1-203ENST00000587062 LTN1O94822 1766 aa28.02■■■□□ 2.08
VAT1-203ENST00000587062 RGPD5Q99666 1765 aa28.02■■■□□ 2.08
VAT1-203ENST00000587062 AMPHP49418 695 aa28.02■■■□□ 2.08
VAT1-203ENST00000587062 FAM182BQ5T319 152 aa28.01■■■□□ 2.07
VAT1-203ENST00000587062 IP6K1Q92551 441 aa28.01■■■□□ 2.07
VAT1-203ENST00000587062 GGNBP2Q9H3C7 697 aa28.01■■■□□ 2.07
VAT1-203ENST00000587062 NLRP2Q9NX02 1062 aa28■■■□□ 2.07
VAT1-203ENST00000587062 ERBB3P21860 1342 aa27.99■■■□□ 2.07
VAT1-203ENST00000587062 ANKRD24Q8TF21 1146 aa27.99■■■□□ 2.07
VAT1-203ENST00000587062 PARP4Q9UKK3 1724 aaKnown RBP27.98■■■□□ 2.07
VAT1-203ENST00000587062 EXOC5O00471 708 aa27.97■■■□□ 2.07
VAT1-203ENST00000587062 CGNL1Q0VF96 1302 aa27.96■■■□□ 2.07
VAT1-203ENST00000587062 RGPD1P0DJD0 1748 aa27.96■■■□□ 2.07
VAT1-203ENST00000587062 DEFB132Q7Z7B7 95 aa27.96■■■□□ 2.07
VAT1-203ENST00000587062 NSD3Q9BZ95 1437 aa27.95■■■□□ 2.07
VAT1-203ENST00000587062 MAP3K19Q56UN5 1328 aa27.94■■■□□ 2.06
VAT1-203ENST00000587062 TRIM37O94972 964 aa27.94■■■□□ 2.06
VAT1-203ENST00000587062 CARD14Q9BXL6 1004 aa27.94■■■□□ 2.06
VAT1-203ENST00000587062 MYOM1P52179 1685 aa27.94■■■□□ 2.06
VAT1-203ENST00000587062 KIF20BQ96Q89 1820 aa27.92■■■□□ 2.06
VAT1-203ENST00000587062 OVOS2A0A0G2JMS6 1433 aa27.92■■■□□ 2.06
VAT1-203ENST00000587062 EP400Q96L91 3159 aa27.91■■■□□ 2.06
VAT1-203ENST00000587062 RTL1A6NKG5 1358 aa27.91■■■□□ 2.06
VAT1-203ENST00000587062 HOXC9P31274 260 aa27.91■■■□□ 2.06
VAT1-203ENST00000587062 LTV1Q96GA3 475 aaPredicted RBP27.91■■■□□ 2.06
VAT1-203ENST00000587062 IL2RBP14784 551 aa27.9■■■□□ 2.06
VAT1-203ENST00000587062 APBA3O96018 575 aa27.89■■■□□ 2.06
VAT1-203ENST00000587062 RRS1Q15050 365 aaKnown RBP27.88■■■□□ 2.05
VAT1-203ENST00000587062 SMG6Q86US8 1419 aaKnown RBP27.87■■■□□ 2.05
VAT1-203ENST00000587062 EN1Q05925 392 aaPredicted RBP27.87■■■□□ 2.05
VAT1-203ENST00000587062 WNK3Q9BYP7 1800 aa27.87■■■□□ 2.05
VAT1-203ENST00000587062 KIF24Q5T7B8 1368 aa27.86■■■□□ 2.05
VAT1-203ENST00000587062 FBLN1P23142 703 aa27.86■■■□□ 2.05
VAT1-203ENST00000587062 FAM208AQ9UK61 1670 aaKnown RBP27.86■■■□□ 2.05
VAT1-203ENST00000587062 LRRC37A3O60309 1634 aa27.85■■■□□ 2.05
VAT1-203ENST00000587062 PANK3Q9H999 370 aa27.85■■■□□ 2.05
VAT1-203ENST00000587062 DISP2A7MBM2 1401 aa27.84■■■□□ 2.05
VAT1-203ENST00000587062 PARD3Q8TEW0 1356 aa27.83■■■□□ 2.05
VAT1-203ENST00000587062 FLT4P35916 1363 aa27.82■■■□□ 2.04
VAT1-203ENST00000587062 MARCH10Q8NA82 808 aaPredicted RBP27.81■■■□□ 2.04
VAT1-203ENST00000587062 KNSTRNQ9Y448 316 aa27.8■■■□□ 2.04
VAT1-203ENST00000587062 TNS2Q63HR2 1409 aa27.8■■■□□ 2.04
VAT1-203ENST00000587062 TNS1Q9HBL0 1735 aaKnown RBP27.8■■■□□ 2.04
VAT1-203ENST00000587062 INSRP06213 1382 aa27.79■■■□□ 2.04
VAT1-203ENST00000587062 BCL11BQ9C0K0 894 aaPredicted RBP27.79■■■□□ 2.04
VAT1-203ENST00000587062 BCL9O00512 1426 aa27.78■■■□□ 2.04
VAT1-203ENST00000587062 PPM1GO15355 546 aaPredicted RBP27.78■■■□□ 2.04
VAT1-203ENST00000587062 NSD2O96028 1365 aa27.77■■■□□ 2.04
VAT1-203ENST00000587062 EZH2Q15910 746 aaKnown RBP27.77■■■□□ 2.04
VAT1-203ENST00000587062 CAMKK2Q96RR4 588 aa27.77■■■□□ 2.04
VAT1-203ENST00000587062 HSP90AB2PQ58FF8 381 aa27.75■■■□□ 2.03
VAT1-203ENST00000587062 NBPF14Q5TI25 921 aa27.74■■■□□ 2.03
VAT1-203ENST00000587062 RAPGEF4Q8WZA2 1011 aa27.74■■■□□ 2.03
VAT1-203ENST00000587062 PEAK1Q9H792 1746 aa27.74■■■□□ 2.03
VAT1-203ENST00000587062 EMILIN1Q9Y6C2 1016 aa27.73■■■□□ 2.03
VAT1-203ENST00000587062 KIF7Q2M1P5 1343 aa27.72■■■□□ 2.03
VAT1-203ENST00000587062 PLSCR1O15162 318 aa27.72■■■□□ 2.03
VAT1-203ENST00000587062 NBPF6Q5VWK0 638 aa27.71■■■□□ 2.03
VAT1-203ENST00000587062 MORC1Q86VD1 984 aa27.71■■■□□ 2.03
VAT1-203ENST00000587062 DDX54Q8TDD1 881 aaKnown RBP27.71■■■□□ 2.03
VAT1-203ENST00000587062 NBPF4Q96M43 638 aa27.71■■■□□ 2.03
VAT1-203ENST00000587062 WASHC2AQ641Q2 1341 aa27.7■■■□□ 2.03
VAT1-203ENST00000587062 SBF2Q86WG5 1849 aa27.7■■■□□ 2.02
VAT1-203ENST00000587062 TATP17735 454 aaPredicted RBP27.7■■■□□ 2.02
VAT1-203ENST00000587062 TNNT2P45379 298 aaPredicted RBP27.7■■■□□ 2.02
VAT1-203ENST00000587062 ZCRB1Q8TBF4 217 aaKnown RBP27.7■■■□□ 2.02
VAT1-203ENST00000587062 ANKRD26Q9UPS8 1709 aa27.7■■■□□ 2.02
VAT1-203ENST00000587062 MAP2P11137 1827 aaKnown RBP27.69■■■□□ 2.02
VAT1-203ENST00000587062 POLKQ9UBT6 870 aa27.68■■■□□ 2.02
VAT1-203ENST00000587062 RGPD2P0DJD1 1756 aa27.64■■■□□ 2.02
VAT1-203ENST00000587062 USHBP1Q8N6Y0 703 aa27.64■■■□□ 2.02
VAT1-203ENST00000587062 ACSBG1Q96GR2 724 aa27.64■■■□□ 2.02
VAT1-203ENST00000587062 PSDA5PKW4 1024 aaPredicted RBP27.62■■■□□ 2.01
VAT1-203ENST00000587062 R3HDM1Q15032 1099 aaKnown RBP27.62■■■□□ 2.01
VAT1-203ENST00000587062 KAT6BQ8WYB5 2073 aa27.61■■■□□ 2.01
VAT1-203ENST00000587062 RGPD3A6NKT7 1758 aaPredicted RBP27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms