RNA–Protein interactions for RNA: ENST00000586118.5

MBD1-213, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 1,012 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-213ENST00000586118 CDCA8Q53HL2 280 aa24.32■■□□□ 1.48
MBD1-213ENST00000586118 PDE3BQ13370 1112 aa24.3■■□□□ 1.48
MBD1-213ENST00000586118 TOM1L2Q6ZVM7 507 aa24.3■■□□□ 1.48
MBD1-213ENST00000586118 USP54Q70EL1 1684 aa24.3■■□□□ 1.48
MBD1-213ENST00000586118 FAM182BQ5T319 152 aa24.29■■□□□ 1.48
MBD1-213ENST00000586118 ZRANB1Q9UGI0 708 aa24.29■■□□□ 1.48
MBD1-213ENST00000586118 ABCC6O95255 1503 aa24.29■■□□□ 1.48
MBD1-213ENST00000586118 WDR17Q8IZU2 1322 aa24.29■■□□□ 1.48
MBD1-213ENST00000586118 CSB-PGBD3P0DP91 1061 aa24.28■■□□□ 1.48
MBD1-213ENST00000586118 COL18A1P39060 1754 aa24.27■■□□□ 1.48
MBD1-213ENST00000586118 BAG6P46379 1132 aa24.27■■□□□ 1.48
MBD1-213ENST00000586118 DEFB132Q7Z7B7 95 aa24.27■■□□□ 1.48
MBD1-213ENST00000586118 ANKRD36BQ8N2N9 1353 aa24.27■■□□□ 1.48
MBD1-213ENST00000586118 FAM196AQ6ZSG2 479 aa24.26■■□□□ 1.47
MBD1-213ENST00000586118 AXIN2Q9Y2T1 843 aa24.26■■□□□ 1.47
MBD1-213ENST00000586118 SRCAPQ6ZRS2 3230 aa24.26■■□□□ 1.47
MBD1-213ENST00000586118 OVOS2A0A0J9YW53 1432 aa24.25■■□□□ 1.47
MBD1-213ENST00000586118 OVOS2Q6IE36 1432 aa24.25■■□□□ 1.47
MBD1-213ENST00000586118 RGPD1P0DJD0 1748 aa24.24■■□□□ 1.47
MBD1-213ENST00000586118 PARP4Q9UKK3 1724 aaKnown RBP24.22■■□□□ 1.47
MBD1-213ENST00000586118 COG3Q96JB2 828 aa24.22■■□□□ 1.47
MBD1-213ENST00000586118 CDCA7Q9BWT1 371 aaPredicted RBP24.21■■□□□ 1.47
MBD1-213ENST00000586118 C11orf95C9JLR9 678 aaPredicted RBP24.19■■□□□ 1.46
MBD1-213ENST00000586118 DDB1Q16531 1140 aa24.19■■□□□ 1.46
MBD1-213ENST00000586118 CARD10Q9BWT7 1032 aa24.19■■□□□ 1.46
MBD1-213ENST00000586118 CCDC7Q96M83 1385 aa24.18■■□□□ 1.46
MBD1-213ENST00000586118 TRIM37O94972 964 aa24.18■■□□□ 1.46
MBD1-213ENST00000586118 LTN1O94822 1766 aa24.17■■□□□ 1.46
MBD1-213ENST00000586118 LRRC37A3O60309 1634 aa24.17■■□□□ 1.46
MBD1-213ENST00000586118 RGPD5Q99666 1765 aa24.16■■□□□ 1.46
MBD1-213ENST00000586118 ERBB3P21860 1342 aa24.16■■□□□ 1.46
MBD1-213ENST00000586118 OVOS2A0A0G2JMS6 1433 aa24.16■■□□□ 1.46
MBD1-213ENST00000586118 DISP2A7MBM2 1401 aa24.16■■□□□ 1.46
MBD1-213ENST00000586118 TNS1Q9HBL0 1735 aaKnown RBP24.15■■□□□ 1.46
MBD1-213ENST00000586118 WNK3Q9BYP7 1800 aa24.14■■□□□ 1.46
MBD1-213ENST00000586118 EIF4G2P78344 907 aaKnown RBP eCLIP24.14■■□□□ 1.45
MBD1-213ENST00000586118 EN1Q05925 392 aaPredicted RBP24.14■■□□□ 1.45
MBD1-213ENST00000586118 NLRP2Q9NX02 1062 aa24.14■■□□□ 1.45
MBD1-213ENST00000586118 ANKRD24Q8TF21 1146 aa24.13■■□□□ 1.45
MBD1-213ENST00000586118 APBA3O96018 575 aa24.12■■□□□ 1.45
MBD1-213ENST00000586118 IP6K1Q92551 441 aa24.1■■□□□ 1.45
MBD1-213ENST00000586118 POLR3GLQ9BT43 218 aa24.1■■□□□ 1.45
MBD1-213ENST00000586118 GGNBP2Q9H3C7 697 aa24.1■■□□□ 1.45
MBD1-213ENST00000586118 MYOM1P52179 1685 aa24.1■■□□□ 1.45
MBD1-213ENST00000586118 PARD3Q8TEW0 1356 aa24.09■■□□□ 1.45
MBD1-213ENST00000586118 AMPHP49418 695 aa24.09■■□□□ 1.45
MBD1-213ENST00000586118 MAP3K19Q56UN5 1328 aa24.09■■□□□ 1.45
MBD1-213ENST00000586118 EXOC5O00471 708 aa24.08■■□□□ 1.45
MBD1-213ENST00000586118 FYB1O15117 783 aa24.08■■□□□ 1.45
MBD1-213ENST00000586118 HSPA5P11021 654 aaKnown RBP24.08■■□□□ 1.45
MBD1-213ENST00000586118 TNS2Q63HR2 1409 aa24.08■■□□□ 1.44
MBD1-213ENST00000586118 NSD3Q9BZ95 1437 aa24.08■■□□□ 1.44
MBD1-213ENST00000586118 RTL1A6NKG5 1358 aa24.07■■□□□ 1.44
MBD1-213ENST00000586118 EZH2Q15910 746 aaKnown RBP24.06■■□□□ 1.44
MBD1-213ENST00000586118 LTV1Q96GA3 475 aaPredicted RBP24.06■■□□□ 1.44
MBD1-213ENST00000586118 KIF20BQ96Q89 1820 aa24.05■■□□□ 1.44
MBD1-213ENST00000586118 PEAK1Q9H792 1746 aa24.05■■□□□ 1.44
MBD1-213ENST00000586118 IL2RBP14784 551 aa24.05■■□□□ 1.44
MBD1-213ENST00000586118 HOXC9P31274 260 aa24.05■■□□□ 1.44
MBD1-213ENST00000586118 MARCH10Q8NA82 808 aaPredicted RBP24.04■■□□□ 1.44
MBD1-213ENST00000586118 CAMKK2Q96RR4 588 aa24.04■■□□□ 1.44
MBD1-213ENST00000586118 FAM208AQ9UK61 1670 aaKnown RBP24.04■■□□□ 1.44
MBD1-213ENST00000586118 RRS1Q15050 365 aaKnown RBP24.02■■□□□ 1.44
MBD1-213ENST00000586118 BCL9O00512 1426 aa24.01■■□□□ 1.43
MBD1-213ENST00000586118 SMG6Q86US8 1419 aaKnown RBP24.01■■□□□ 1.43
MBD1-213ENST00000586118 FBLN1P23142 703 aa24.01■■□□□ 1.43
MBD1-213ENST00000586118 CARD14Q9BXL6 1004 aa24.01■■□□□ 1.43
MBD1-213ENST00000586118 CGNL1Q0VF96 1302 aa24.01■■□□□ 1.43
MBD1-213ENST00000586118 PSDA5PKW4 1024 aaPredicted RBP24■■□□□ 1.43
MBD1-213ENST00000586118 BCL11BQ9C0K0 894 aaPredicted RBP23.99■■□□□ 1.43
MBD1-213ENST00000586118 FLT4P35916 1363 aa23.96■■□□□ 1.43
MBD1-213ENST00000586118 KIF24Q5T7B8 1368 aa23.96■■□□□ 1.43
MBD1-213ENST00000586118 R3HDM1Q15032 1099 aaKnown RBP23.96■■□□□ 1.43
MBD1-213ENST00000586118 RREB1Q92766 1687 aa23.95■■□□□ 1.43
MBD1-213ENST00000586118 SBF2Q86WG5 1849 aa23.95■■□□□ 1.42
MBD1-213ENST00000586118 NBPF14Q5TI25 921 aa23.94■■□□□ 1.42
MBD1-213ENST00000586118 INSRP06213 1382 aa23.92■■□□□ 1.42
MBD1-213ENST00000586118 PLSCR1O15162 318 aa23.92■■□□□ 1.42
MBD1-213ENST00000586118 RGPD3A6NKT7 1758 aaPredicted RBP23.92■■□□□ 1.42
MBD1-213ENST00000586118 RGPD4Q7Z3J3 1758 aa23.92■■□□□ 1.42
MBD1-213ENST00000586118 NUP188Q5SRE5 1749 aa23.92■■□□□ 1.42
MBD1-213ENST00000586118 PPM1GO15355 546 aaPredicted RBP23.9■■□□□ 1.42
MBD1-213ENST00000586118 HSP90AB2PQ58FF8 381 aa23.9■■□□□ 1.42
MBD1-213ENST00000586118 EMILIN1Q9Y6C2 1016 aa23.9■■□□□ 1.42
MBD1-213ENST00000586118 PTF1AQ7RTS3 328 aa23.89■■□□□ 1.41
MBD1-213ENST00000586118 ACSBG1Q96GR2 724 aa23.89■■□□□ 1.41
MBD1-213ENST00000586118 PANK3Q9H999 370 aa23.89■■□□□ 1.41
MBD1-213ENST00000586118 NBPF6Q5VWK0 638 aa23.88■■□□□ 1.41
MBD1-213ENST00000586118 DDX54Q8TDD1 881 aaKnown RBP23.88■■□□□ 1.41
MBD1-213ENST00000586118 RAPGEF4Q8WZA2 1011 aa23.88■■□□□ 1.41
MBD1-213ENST00000586118 NBPF4Q96M43 638 aa23.88■■□□□ 1.41
MBD1-213ENST00000586118 NHSQ6T4R5 1651 aa23.88■■□□□ 1.41
MBD1-213ENST00000586118 USHBP1Q8N6Y0 703 aa23.87■■□□□ 1.41
MBD1-213ENST00000586118 MEGF6O75095 1541 aa23.87■■□□□ 1.41
MBD1-213ENST00000586118 LRP5O75197 1615 aa23.87■■□□□ 1.41
MBD1-213ENST00000586118 KCNQ2O43526 872 aa23.86■■□□□ 1.41
MBD1-213ENST00000586118 NSD2O96028 1365 aa23.86■■□□□ 1.41
MBD1-213ENST00000586118 ZCRB1Q8TBF4 217 aaKnown RBP23.85■■□□□ 1.41
MBD1-213ENST00000586118 RGPD2P0DJD1 1756 aa23.85■■□□□ 1.41
MBD1-213ENST00000586118 TATP17735 454 aaPredicted RBP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms