RNA–Protein interactions for RNA: ENST00000585843.1

DNMT1-204, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 911 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-204ENST00000585843 LARP1Q6PKG0 1096 aaKnown RBP19.23■□□□□ 0.67
DNMT1-204ENST00000585843 SPATA31A1Q5TZJ5 1347 aa19.23■□□□□ 0.67
DNMT1-204ENST00000585843 COL5A2P05997 1499 aaPredicted RBP19.22■□□□□ 0.67
DNMT1-204ENST00000585843 CCDC7Q96M83 1385 aa19.22■□□□□ 0.67
DNMT1-204ENST00000585843 ZEB1P37275 1124 aaPredicted RBP19.22■□□□□ 0.67
DNMT1-204ENST00000585843 FAM98CQ17RN3 349 aaKnown RBP19.22■□□□□ 0.67
DNMT1-204ENST00000585843 SEPT12Q8IYM1 358 aa19.21■□□□□ 0.67
DNMT1-204ENST00000585843 COL18A1P39060 1754 aa19.21■□□□□ 0.67
DNMT1-204ENST00000585843 WASHC2AQ641Q2 1341 aa19.21■□□□□ 0.67
DNMT1-204ENST00000585843 KIF20BQ96Q89 1820 aa19.21■□□□□ 0.67
DNMT1-204ENST00000585843 A0A0G2JS52 829 aa19.2■□□□□ 0.66
DNMT1-204ENST00000585843 MYT1Q01538 1121 aa19.2■□□□□ 0.66
DNMT1-204ENST00000585843 USP35Q9P2H5 1018 aa19.2■□□□□ 0.66
DNMT1-204ENST00000585843 ABCC6O95255 1503 aa19.2■□□□□ 0.66
DNMT1-204ENST00000585843 CSB-PGBD3P0DP91 1061 aa19.19■□□□□ 0.66
DNMT1-204ENST00000585843 KNSTRNQ9Y448 316 aa19.19■□□□□ 0.66
DNMT1-204ENST00000585843 WDR17Q8IZU2 1322 aa19.19■□□□□ 0.66
DNMT1-204ENST00000585843 FBLN1P23142 703 aa19.18■□□□□ 0.66
DNMT1-204ENST00000585843 AMPHP49418 695 aa19.18■□□□□ 0.66
DNMT1-204ENST00000585843 TOM1L2Q6ZVM7 507 aa19.18■□□□□ 0.66
DNMT1-204ENST00000585843 TCP11L2Q8N4U5 519 aa19.18■□□□□ 0.66
DNMT1-204ENST00000585843 IP6K1Q92551 441 aa19.18■□□□□ 0.66
DNMT1-204ENST00000585843 MAP3K19Q56UN5 1328 aa19.18■□□□□ 0.66
DNMT1-204ENST00000585843 CRB1P82279 1406 aa19.17■□□□□ 0.66
DNMT1-204ENST00000585843 THRAP3Q9Y2W1 955 aaKnown RBP19.17■□□□□ 0.66
DNMT1-204ENST00000585843 LTN1O94822 1766 aa19.16■□□□□ 0.66
DNMT1-204ENST00000585843 RRS1Q15050 365 aaKnown RBP19.16■□□□□ 0.66
DNMT1-204ENST00000585843 BARGINQ6ZT62 677 aa19.16■□□□□ 0.66
DNMT1-204ENST00000585843 NSD2O96028 1365 aa19.15■□□□□ 0.66
DNMT1-204ENST00000585843 BLMP54132 1417 aaPredicted RBP19.15■□□□□ 0.66
DNMT1-204ENST00000585843 HOXC9P31274 260 aa19.14■□□□□ 0.65
DNMT1-204ENST00000585843 ANKRD24Q8TF21 1146 aa19.14■□□□□ 0.65
DNMT1-204ENST00000585843 CARD10Q9BWT7 1032 aa19.14■□□□□ 0.65
DNMT1-204ENST00000585843 KRT27Q7Z3Y8 459 aa19.13■□□□□ 0.65
DNMT1-204ENST00000585843 ERBB3P21860 1342 aa19.13■□□□□ 0.65
DNMT1-204ENST00000585843 RGPD5Q99666 1765 aa19.13■□□□□ 0.65
DNMT1-204ENST00000585843 RTL1A6NKG5 1358 aa19.12■□□□□ 0.65
DNMT1-204ENST00000585843 NLRP2Q9NX02 1062 aa19.12■□□□□ 0.65
DNMT1-204ENST00000585843 EP400Q96L91 3159 aa19.12■□□□□ 0.65
DNMT1-204ENST00000585843 TNNT2P45379 298 aaPredicted RBP19.11■□□□□ 0.65
DNMT1-204ENST00000585843 MORC1Q86VD1 984 aa19.11■□□□□ 0.65
DNMT1-204ENST00000585843 LTV1Q96GA3 475 aaPredicted RBP19.11■□□□□ 0.65
DNMT1-204ENST00000585843 KIF24Q5T7B8 1368 aa19.1■□□□□ 0.65
DNMT1-204ENST00000585843 PER1O15534 1290 aaPredicted RBP19.1■□□□□ 0.65
DNMT1-204ENST00000585843 AMER1Q5JTC6 1135 aaPredicted RBP19.1■□□□□ 0.65
DNMT1-204ENST00000585843 THSD7AQ9UPZ6 1657 aa19.09■□□□□ 0.65
DNMT1-204ENST00000585843 PPM1GO15355 546 aaPredicted RBP19.09■□□□□ 0.65
DNMT1-204ENST00000585843 UPF1Q92900 1129 aaKnown RBP eCLIP19.09■□□□□ 0.65
DNMT1-204ENST00000585843 FLT4P35916 1363 aa19.08■□□□□ 0.65
DNMT1-204ENST00000585843 CDCA7Q9BWT1 371 aaPredicted RBP19.08■□□□□ 0.64
DNMT1-204ENST00000585843 EMILIN1Q9Y6C2 1016 aa19.08■□□□□ 0.64
DNMT1-204ENST00000585843 ANKRD26Q9UPS8 1709 aa19.08■□□□□ 0.64
DNMT1-204ENST00000585843 BRWD3Q6RI45 1802 aa19.07■□□□□ 0.64
DNMT1-204ENST00000585843 PDE3BQ13370 1112 aa19.07■□□□□ 0.64
DNMT1-204ENST00000585843 HSP90AB2PQ58FF8 381 aa19.07■□□□□ 0.64
DNMT1-204ENST00000585843 POLKQ9UBT6 870 aa19.07■□□□□ 0.64
DNMT1-204ENST00000585843 INSRP06213 1382 aa19.06■□□□□ 0.64
DNMT1-204ENST00000585843 SMG6Q86US8 1419 aaKnown RBP19.05■□□□□ 0.64
DNMT1-204ENST00000585843 DDB1Q16531 1140 aa19.04■□□□□ 0.64
DNMT1-204ENST00000585843 CC2D1BQ5T0F9 858 aaKnown RBP19.04■□□□□ 0.64
DNMT1-204ENST00000585843 PEAK1Q9H792 1746 aa19.03■□□□□ 0.64
DNMT1-204ENST00000585843 IL2RBP14784 551 aa19.02■□□□□ 0.64
DNMT1-204ENST00000585843 FAM182BQ5T319 152 aa19.02■□□□□ 0.64
DNMT1-204ENST00000585843 CCDC125Q86Z20 511 aa19.02■□□□□ 0.64
DNMT1-204ENST00000585843 NPC1L1Q9UHC9 1359 aa19.02■□□□□ 0.64
DNMT1-204ENST00000585843 FAM208AQ9UK61 1670 aaKnown RBP19.01■□□□□ 0.63
DNMT1-204ENST00000585843 DISP2A7MBM2 1401 aa19.01■□□□□ 0.63
DNMT1-204ENST00000585843 PARP4Q9UKK3 1724 aaKnown RBP19.01■□□□□ 0.63
DNMT1-204ENST00000585843 EXOC5O00471 708 aa19.01■□□□□ 0.63
DNMT1-204ENST00000585843 NBPF6Q5VWK0 638 aa19.01■□□□□ 0.63
DNMT1-204ENST00000585843 NBPF4Q96M43 638 aa19.01■□□□□ 0.63
DNMT1-204ENST00000585843 MAP2P11137 1827 aaKnown RBP19.01■□□□□ 0.63
DNMT1-204ENST00000585843 CNGB1Q14028 1251 aaPredicted RBP19■□□□□ 0.63
DNMT1-204ENST00000585843 FAM196AQ6ZSG2 479 aa19■□□□□ 0.63
DNMT1-204ENST00000585843 WNK3Q9BYP7 1800 aa18.97■□□□□ 0.63
DNMT1-204ENST00000585843 SF3B2Q13435 895 aaKnown RBP18.97■□□□□ 0.63
DNMT1-204ENST00000585843 USHBP1Q8N6Y0 703 aa18.97■□□□□ 0.63
DNMT1-204ENST00000585843 LRRC37A3O60309 1634 aa18.96■□□□□ 0.63
DNMT1-204ENST00000585843 TNS2Q63HR2 1409 aa18.95■□□□□ 0.62
DNMT1-204ENST00000585843 EIF4A2Q14240 407 aaKnown RBP18.95■□□□□ 0.62
DNMT1-204ENST00000585843 MARCH10Q8NA82 808 aaPredicted RBP18.95■□□□□ 0.62
DNMT1-204ENST00000585843 RAPGEF4Q8WZA2 1011 aa18.95■□□□□ 0.62
DNMT1-204ENST00000585843 OVOS2A0A0G2JMS6 1433 aa18.94■□□□□ 0.62
DNMT1-204ENST00000585843 MTHFSP49914 203 aa18.94■□□□□ 0.62
DNMT1-204ENST00000585843 RGPD2P0DJD1 1756 aa18.93■□□□□ 0.62
DNMT1-204ENST00000585843 DDX10Q13206 875 aaKnown RBP18.93■□□□□ 0.62
DNMT1-204ENST00000585843 EYA1Q99502 592 aa18.93■□□□□ 0.62
DNMT1-204ENST00000585843 TRIM37O94972 964 aa18.92■□□□□ 0.62
DNMT1-204ENST00000585843 TATP17735 454 aaPredicted RBP18.92■□□□□ 0.62
DNMT1-204ENST00000585843 ZCRB1Q8TBF4 217 aaKnown RBP18.91■□□□□ 0.62
DNMT1-204ENST00000585843 MEGF6O75095 1541 aa18.9■□□□□ 0.62
DNMT1-204ENST00000585843 DDX54Q8TDD1 881 aaKnown RBP18.9■□□□□ 0.62
DNMT1-204ENST00000585843 BCL9O00512 1426 aa18.89■□□□□ 0.61
DNMT1-204ENST00000585843 NCAPD2Q15021 1401 aa18.89■□□□□ 0.61
DNMT1-204ENST00000585843 BAG6P46379 1132 aa18.88■□□□□ 0.61
DNMT1-204ENST00000585843 IL13P35225 146 aa18.87■□□□□ 0.61
DNMT1-204ENST00000585843 DEFB132Q7Z7B7 95 aa18.87■□□□□ 0.61
DNMT1-204ENST00000585843 IGSF1Q8N6C5 1336 aa18.87■□□□□ 0.61
DNMT1-204ENST00000585843 RGPD1P0DJD0 1748 aa18.86■□□□□ 0.61
DNMT1-204ENST00000585843 APBA3O96018 575 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 469.6 ms