RNA–Protein interactions for RNA: ENST00000584483.5

SMARCD2-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 821 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-211ENST00000584483 RGPD1P0DJD0 1748 aa19.12■□□□□ 0.65
SMARCD2-211ENST00000584483 KIF24Q5T7B8 1368 aa19.12■□□□□ 0.65
SMARCD2-211ENST00000584483 IP6K1Q92551 441 aa19.12■□□□□ 0.65
SMARCD2-211ENST00000584483 LRRC59Q96AG4 307 aaKnown RBP19.12■□□□□ 0.65
SMARCD2-211ENST00000584483 U2SURPO15042 1029 aaKnown RBP19.11■□□□□ 0.65
SMARCD2-211ENST00000584483 CCDC146Q8IYE0 955 aa19.11■□□□□ 0.65
SMARCD2-211ENST00000584483 COL22A1Q8NFW1 1626 aaPredicted RBP19.11■□□□□ 0.65
SMARCD2-211ENST00000584483 U2AF1L5P0DN76 240 aaPredicted RBP19.1■□□□□ 0.65
SMARCD2-211ENST00000584483 U2AF1Q01081 240 aaKnown RBP eCLIP19.1■□□□□ 0.65
SMARCD2-211ENST00000584483 AXIN2Q9Y2T1 843 aa19.1■□□□□ 0.65
SMARCD2-211ENST00000584483 RTL1A6NKG5 1358 aa19.09■□□□□ 0.65
SMARCD2-211ENST00000584483 ZBTB7CA1YPR0 619 aa19.09■□□□□ 0.65
SMARCD2-211ENST00000584483 NUDCQ9Y266 331 aa19.09■□□□□ 0.65
SMARCD2-211ENST00000584483 PLEKHF1Q96S99 279 aa19.08■□□□□ 0.64
SMARCD2-211ENST00000584483 RGPD2P0DJD1 1756 aa19.08■□□□□ 0.64
SMARCD2-211ENST00000584483 CPDO75976 1380 aa19.06■□□□□ 0.64
SMARCD2-211ENST00000584483 KIAA0232Q92628 1395 aa19.06■□□□□ 0.64
SMARCD2-211ENST00000584483 RSPH6AQ9H0K4 717 aa19.06■□□□□ 0.64
SMARCD2-211ENST00000584483 HMOX1P09601 288 aa19.05■□□□□ 0.64
SMARCD2-211ENST00000584483 CHRNA2Q15822 529 aa19.05■□□□□ 0.64
SMARCD2-211ENST00000584483 EYA1Q99502 592 aa19.05■□□□□ 0.64
SMARCD2-211ENST00000584483 APAF1O14727 1248 aa19.04■□□□□ 0.64
SMARCD2-211ENST00000584483 AEBP1Q8IUX7 1158 aa19.04■□□□□ 0.64
SMARCD2-211ENST00000584483 RUNDC1Q96C34 613 aa19.04■□□□□ 0.64
SMARCD2-211ENST00000584483 LTV1Q96GA3 475 aaPredicted RBP19.04■□□□□ 0.64
SMARCD2-211ENST00000584483 FCHSD2O94868 740 aa19.03■□□□□ 0.64
SMARCD2-211ENST00000584483 LMO7Q8WWI1 1683 aa19.03■□□□□ 0.64
SMARCD2-211ENST00000584483 IGSF1Q8N6C5 1336 aa19.02■□□□□ 0.64
SMARCD2-211ENST00000584483 SALL2Q9Y467 1007 aaPredicted RBP19.02■□□□□ 0.64
SMARCD2-211ENST00000584483 ZBED9Q6R2W3 1325 aa19.01■□□□□ 0.63
SMARCD2-211ENST00000584483 NBPF6Q5VWK0 638 aa19.01■□□□□ 0.63
SMARCD2-211ENST00000584483 PHACTR3Q96KR7 559 aa19.01■□□□□ 0.63
SMARCD2-211ENST00000584483 NBPF4Q96M43 638 aa19.01■□□□□ 0.63
SMARCD2-211ENST00000584483 CAMTA1Q9Y6Y1 1673 aa19.01■□□□□ 0.63
SMARCD2-211ENST00000584483 ABCC6O95255 1503 aa19■□□□□ 0.63
SMARCD2-211ENST00000584483 FAM83GA6ND36 823 aa19■□□□□ 0.63
SMARCD2-211ENST00000584483 PRKAR2BP31323 418 aa19■□□□□ 0.63
SMARCD2-211ENST00000584483 SULT6B1Q6IMI4 303 aa19■□□□□ 0.63
SMARCD2-211ENST00000584483 TCP11L2Q8N4U5 519 aa19■□□□□ 0.63
SMARCD2-211ENST00000584483 ANKRD24Q8TF21 1146 aa19■□□□□ 0.63
SMARCD2-211ENST00000584483 KDRP35968 1356 aa18.98■□□□□ 0.63
SMARCD2-211ENST00000584483 HAP1P54257 671 aaPredicted RBP18.98■□□□□ 0.63
SMARCD2-211ENST00000584483 USHBP1Q8N6Y0 703 aa18.98■□□□□ 0.63
SMARCD2-211ENST00000584483 RRP7AQ9Y3A4 280 aaKnown RBP18.98■□□□□ 0.63
SMARCD2-211ENST00000584483 ERBB3P21860 1342 aa18.98■□□□□ 0.63
SMARCD2-211ENST00000584483 HSPA1LP34931 641 aa18.97■□□□□ 0.63
SMARCD2-211ENST00000584483 PRDM11Q9NQV5 511 aa18.97■□□□□ 0.63
SMARCD2-211ENST00000584483 NCAPD2Q15021 1401 aa18.97■□□□□ 0.63
SMARCD2-211ENST00000584483 ZNF521Q96K83 1311 aa18.96■□□□□ 0.63
SMARCD2-211ENST00000584483 PHF23Q9BUL5 403 aaPredicted RBP18.95■□□□□ 0.62
SMARCD2-211ENST00000584483 FAM208AQ9UK61 1670 aaKnown RBP18.95■□□□□ 0.62
SMARCD2-211ENST00000584483 TMPOP42166 694 aaKnown RBP18.94■□□□□ 0.62
SMARCD2-211ENST00000584483 DLG5Q8TDM6 1919 aa18.94■□□□□ 0.62
SMARCD2-211ENST00000584483 JCADQ9P266 1359 aa18.93■□□□□ 0.62
SMARCD2-211ENST00000584483 COL14A1Q05707 1796 aaKnown RBP18.93■□□□□ 0.62
SMARCD2-211ENST00000584483 NEUROD2Q15784 382 aa18.93■□□□□ 0.62
SMARCD2-211ENST00000584483 PNNQ9H307 717 aaKnown RBP18.93■□□□□ 0.62
SMARCD2-211ENST00000584483 COL5A2P05997 1499 aaPredicted RBP18.92■□□□□ 0.62
SMARCD2-211ENST00000584483 NUTM2BA6NNL0 878 aaPredicted RBP18.92■□□□□ 0.62
SMARCD2-211ENST00000584483 NUTM2EB1AL46 878 aaPredicted RBP18.92■□□□□ 0.62
SMARCD2-211ENST00000584483 NUTM2AQ8IVF1 878 aaPredicted RBP18.92■□□□□ 0.62
SMARCD2-211ENST00000584483 TRIM35Q9UPQ4 493 aa18.92■□□□□ 0.62
SMARCD2-211ENST00000584483 CDCA7LQ96GN5 454 aa18.91■□□□□ 0.62
SMARCD2-211ENST00000584483 ADAMTS2O95450 1211 aa18.9■□□□□ 0.62
SMARCD2-211ENST00000584483 NFE2L2Q16236 605 aa18.9■□□□□ 0.62
SMARCD2-211ENST00000584483 WWC1Q8IX03 1113 aa18.9■□□□□ 0.62
SMARCD2-211ENST00000584483 MAPK8IP3Q9UPT6 1336 aa18.9■□□□□ 0.62
SMARCD2-211ENST00000584483 PLCH1Q4KWH8 1693 aa18.89■□□□□ 0.61
SMARCD2-211ENST00000584483 CENPBP07199 599 aaPredicted RBP18.89■□□□□ 0.61
SMARCD2-211ENST00000584483 NCBP3Q53F19 620 aaKnown RBP18.89■□□□□ 0.61
SMARCD2-211ENST00000584483 SPINK5Q9NQ38 1064 aaPredicted RBP18.89■□□□□ 0.61
SMARCD2-211ENST00000584483 NLRP2Q9NX02 1062 aa18.89■□□□□ 0.61
SMARCD2-211ENST00000584483 RIPK4P57078 832 aa18.88■□□□□ 0.61
SMARCD2-211ENST00000584483 CCDC27Q2M243 656 aa18.88■□□□□ 0.61
SMARCD2-211ENST00000584483 MTHFSDQ2M296 383 aaKnown RBP18.88■□□□□ 0.61
SMARCD2-211ENST00000584483 BTG4Q9NY30 223 aa18.88■□□□□ 0.61
SMARCD2-211ENST00000584483 WDR17Q8IZU2 1322 aa18.88■□□□□ 0.61
SMARCD2-211ENST00000584483 LRP6O75581 1613 aa18.88■□□□□ 0.61
SMARCD2-211ENST00000584483 CSB-PGBD3P0DP91 1061 aa18.87■□□□□ 0.61
SMARCD2-211ENST00000584483 LARP1Q6PKG0 1096 aaKnown RBP18.87■□□□□ 0.61
SMARCD2-211ENST00000584483 NGEFQ8N5V2 710 aa18.87■□□□□ 0.61
SMARCD2-211ENST00000584483 NRAPQ86VF7 1730 aa18.86■□□□□ 0.61
SMARCD2-211ENST00000584483 STRN4Q9NRL3 753 aa18.85■□□□□ 0.61
SMARCD2-211ENST00000584483 MEGF6O75095 1541 aa18.84■□□□□ 0.61
SMARCD2-211ENST00000584483 SPATA31A6Q5VVP1 1343 aa18.83■□□□□ 0.61
SMARCD2-211ENST00000584483 NEFMP07197 916 aa18.83■□□□□ 0.6
SMARCD2-211ENST00000584483 SLFN5Q08AF3 891 aa18.83■□□□□ 0.6
SMARCD2-211ENST00000584483 PDE3BQ13370 1112 aa18.83■□□□□ 0.6
SMARCD2-211ENST00000584483 TRMT2AQ8IZ69 625 aaKnown RBP18.83■□□□□ 0.6
SMARCD2-211ENST00000584483 SLIT2O94813 1529 aa18.83■□□□□ 0.6
SMARCD2-211ENST00000584483 EVA1CP58658 441 aa18.82■□□□□ 0.6
SMARCD2-211ENST00000584483 GOLGA2Q08379 1002 aa18.82■□□□□ 0.6
SMARCD2-211ENST00000584483 TOM1L2Q6ZVM7 507 aa18.82■□□□□ 0.6
SMARCD2-211ENST00000584483 WDR63Q8IWG1 891 aa18.82■□□□□ 0.6
SMARCD2-211ENST00000584483 THUMPD2Q9BTF0 503 aaKnown RBP18.82■□□□□ 0.6
SMARCD2-211ENST00000584483 CARD10Q9BWT7 1032 aa18.82■□□□□ 0.6
SMARCD2-211ENST00000584483 NWD2Q9ULI1 1742 aa18.81■□□□□ 0.6
SMARCD2-211ENST00000584483 DCTN1Q14203 1278 aa18.81■□□□□ 0.6
SMARCD2-211ENST00000584483 CRB1P82279 1406 aa18.81■□□□□ 0.6
SMARCD2-211ENST00000584483 DUSP27Q5VZP5 1158 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms