RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 OVOS2A0A0J9YW53 1432 aa13.87□□□□□ -0.19
SKA2-208ENST00000583927 BLMP54132 1417 aaPredicted RBP13.87□□□□□ -0.19
SKA2-208ENST00000583927 CRB1P82279 1406 aa13.87□□□□□ -0.19
SKA2-208ENST00000583927 OVOS2Q6IE36 1432 aa13.87□□□□□ -0.19
SKA2-208ENST00000583927 STRN4Q9NRL3 753 aa13.86□□□□□ -0.19
SKA2-208ENST00000583927 LARP1Q6PKG0 1096 aaKnown RBP13.85□□□□□ -0.19
SKA2-208ENST00000583927 FAM208AQ9UK61 1670 aaKnown RBP13.85□□□□□ -0.19
SKA2-208ENST00000583927 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.84□□□□□ -0.19
SKA2-208ENST00000583927 TCP11L2Q8N4U5 519 aa13.84□□□□□ -0.19
SKA2-208ENST00000583927 SBF2Q86WG5 1849 aa13.84□□□□□ -0.19
SKA2-208ENST00000583927 WDR17Q8IZU2 1322 aa13.84□□□□□ -0.19
SKA2-208ENST00000583927 TNS1Q9HBL0 1735 aaKnown RBP13.84□□□□□ -0.19
SKA2-208ENST00000583927 NME9Q86XW9 330 aa13.83□□□□□ -0.2
SKA2-208ENST00000583927 AXIN2Q9Y2T1 843 aa13.83□□□□□ -0.2
SKA2-208ENST00000583927 ZRANB1Q9UGI0 708 aa13.81□□□□□ -0.2
SKA2-208ENST00000583927 LRRC37A3O60309 1634 aa13.81□□□□□ -0.2
SKA2-208ENST00000583927 PEAK1Q9H792 1746 aa13.81□□□□□ -0.2
SKA2-208ENST00000583927 SRCAPQ6ZRS2 3230 aa13.8□□□□□ -0.2
SKA2-208ENST00000583927 A0A0G2JS52 829 aa13.8□□□□□ -0.2
SKA2-208ENST00000583927 EIF4G2P78344 907 aaKnown RBP eCLIP13.8□□□□□ -0.26e-6■■■■□ 25.1
SKA2-208ENST00000583927 MYT1Q01538 1121 aa13.8□□□□□ -0.2
SKA2-208ENST00000583927 ANKRD26Q9UPS8 1709 aa13.79□□□□□ -0.2
SKA2-208ENST00000583927 C11orf95C9JLR9 678 aaPredicted RBP13.79□□□□□ -0.2
SKA2-208ENST00000583927 CDCA7Q9BWT1 371 aaPredicted RBP13.79□□□□□ -0.2
SKA2-208ENST00000583927 CARD10Q9BWT7 1032 aa13.79□□□□□ -0.2
SKA2-208ENST00000583927 USP35Q9P2H5 1018 aa13.79□□□□□ -0.2
SKA2-208ENST00000583927 CCDC7Q96M83 1385 aa13.79□□□□□ -0.2
SKA2-208ENST00000583927 DISP2A7MBM2 1401 aa13.79□□□□□ -0.2
SKA2-208ENST00000583927 MSH5O43196 834 aa13.78□□□□□ -0.2
SKA2-208ENST00000583927 FAM196AQ6ZSG2 479 aa13.78□□□□□ -0.2
SKA2-208ENST00000583927 TOM1L2Q6ZVM7 507 aa13.78□□□□□ -0.2
SKA2-208ENST00000583927 COG3Q96JB2 828 aa13.78□□□□□ -0.2
SKA2-208ENST00000583927 ERBB3P21860 1342 aa13.78□□□□□ -0.2
SKA2-208ENST00000583927 MAP2P11137 1827 aaKnown RBP13.78□□□□□ -0.2
SKA2-208ENST00000583927 RGPD3A6NKT7 1758 aaPredicted RBP13.77□□□□□ -0.21
SKA2-208ENST00000583927 FYB1O15117 783 aa13.77□□□□□ -0.21
SKA2-208ENST00000583927 SF3B2Q13435 895 aaKnown RBP13.77□□□□□ -0.21
SKA2-208ENST00000583927 RGPD4Q7Z3J3 1758 aa13.77□□□□□ -0.21
SKA2-208ENST00000583927 BCL9O00512 1426 aa13.76□□□□□ -0.21
SKA2-208ENST00000583927 ZBTB7CA1YPR0 619 aa13.76□□□□□ -0.21
SKA2-208ENST00000583927 SOX12O15370 315 aa13.76□□□□□ -0.21
SKA2-208ENST00000583927 PDE3BQ13370 1112 aa13.76□□□□□ -0.21
SKA2-208ENST00000583927 IP6K1Q92551 441 aa13.76□□□□□ -0.21
SKA2-208ENST00000583927 RGPD2P0DJD1 1756 aa13.76□□□□□ -0.21
SKA2-208ENST00000583927 RTL1A6NKG5 1358 aa13.75□□□□□ -0.21
SKA2-208ENST00000583927 HSPA5P11021 654 aaKnown RBP13.75□□□□□ -0.21
SKA2-208ENST00000583927 KIF24Q5T7B8 1368 aa13.74□□□□□ -0.21
SKA2-208ENST00000583927 BAG6P46379 1132 aa13.74□□□□□ -0.21
SKA2-208ENST00000583927 CARD14Q9BXL6 1004 aa13.74□□□□□ -0.21
SKA2-208ENST00000583927 RREB1Q92766 1687 aa13.74□□□□□ -0.21
SKA2-208ENST00000583927 OVOS2A0A0G2JMS6 1433 aa13.73□□□□□ -0.21
SKA2-208ENST00000583927 KAT6BQ8WYB5 2073 aa13.73□□□□□ -0.21
SKA2-208ENST00000583927 DDB1Q16531 1140 aa13.73□□□□□ -0.21
SKA2-208ENST00000583927 NSD3Q9BZ95 1437 aa13.73□□□□□ -0.21
SKA2-208ENST00000583927 PARD3Q8TEW0 1356 aa13.72□□□□□ -0.21
SKA2-208ENST00000583927 MAP3K19Q56UN5 1328 aa13.72□□□□□ -0.21
SKA2-208ENST00000583927 CSB-PGBD3P0DP91 1061 aa13.72□□□□□ -0.21
SKA2-208ENST00000583927 FAM182BQ5T319 152 aa13.72□□□□□ -0.21
SKA2-208ENST00000583927 ANKRD24Q8TF21 1146 aa13.72□□□□□ -0.21
SKA2-208ENST00000583927 TNS2Q63HR2 1409 aa13.72□□□□□ -0.21
SKA2-208ENST00000583927 DEFB132Q7Z7B7 95 aa13.71□□□□□ -0.21
SKA2-208ENST00000583927 GGNBP2Q9H3C7 697 aa13.71□□□□□ -0.21
SKA2-208ENST00000583927 CGNL1Q0VF96 1302 aa13.7□□□□□ -0.22
SKA2-208ENST00000583927 HOXC9P31274 260 aa13.7□□□□□ -0.22
SKA2-208ENST00000583927 NUP188Q5SRE5 1749 aa13.69□□□□□ -0.22
SKA2-208ENST00000583927 SHANK3Q9BYB0 1731 aa13.69□□□□□ -0.22
SKA2-208ENST00000583927 EXOC5O00471 708 aa13.68□□□□□ -0.22
SKA2-208ENST00000583927 TRIM37O94972 964 aa13.68□□□□□ -0.22
SKA2-208ENST00000583927 AMPHP49418 695 aa13.68□□□□□ -0.22
SKA2-208ENST00000583927 NLRP2Q9NX02 1062 aa13.68□□□□□ -0.22
SKA2-208ENST00000583927 NHSQ6T4R5 1651 aa13.68□□□□□ -0.22
SKA2-208ENST00000583927 INSRP06213 1382 aa13.68□□□□□ -0.22
SKA2-208ENST00000583927 FLT4P35916 1363 aa13.68□□□□□ -0.22
SKA2-208ENST00000583927 IL2RBP14784 551 aa13.67□□□□□ -0.22
SKA2-208ENST00000583927 MARCH10Q8NA82 808 aaPredicted RBP13.67□□□□□ -0.22
SKA2-208ENST00000583927 CAMKK2Q96RR4 588 aa13.67□□□□□ -0.22
SKA2-208ENST00000583927 NSD2O96028 1365 aa13.67□□□□□ -0.22
SKA2-208ENST00000583927 FBLN1P23142 703 aa13.66□□□□□ -0.22
SKA2-208ENST00000583927 RRS1Q15050 365 aaKnown RBP13.66□□□□□ -0.22
SKA2-208ENST00000583927 PIAS4Q8N2W9 510 aaPredicted RBP13.66□□□□□ -0.22
SKA2-208ENST00000583927 SMG6Q86US8 1419 aaKnown RBP13.65□□□□□ -0.22
SKA2-208ENST00000583927 PLSCR1O15162 318 aa13.65□□□□□ -0.22
SKA2-208ENST00000583927 EN1Q05925 392 aaPredicted RBP13.65□□□□□ -0.22
SKA2-208ENST00000583927 BCL11BQ9C0K0 894 aaPredicted RBP13.65□□□□□ -0.22
SKA2-208ENST00000583927 NCAPD2Q15021 1401 aa13.64□□□□□ -0.23
SKA2-208ENST00000583927 APBA3O96018 575 aa13.64□□□□□ -0.23
SKA2-208ENST00000583927 PANK3Q9H999 370 aa13.64□□□□□ -0.23
SKA2-208ENST00000583927 BTAF1O14981 1849 aa13.64□□□□□ -0.23
SKA2-208ENST00000583927 PKD1L3Q7Z443 1732 aa13.63□□□□□ -0.23
SKA2-208ENST00000583927 LRP5O75197 1615 aa13.63□□□□□ -0.23
SKA2-208ENST00000583927 EZH2Q15910 746 aaKnown RBP13.62□□□□□ -0.23
SKA2-208ENST00000583927 POLR3GLQ9BT43 218 aa13.62□□□□□ -0.23
SKA2-208ENST00000583927 KIF7Q2M1P5 1343 aa13.62□□□□□ -0.23
SKA2-208ENST00000583927 WASHC2AQ641Q2 1341 aa13.62□□□□□ -0.23
SKA2-208ENST00000583927 HSP90AB2PQ58FF8 381 aa13.61□□□□□ -0.23
SKA2-208ENST00000583927 LTV1Q96GA3 475 aaPredicted RBP13.61□□□□□ -0.23
SKA2-208ENST00000583927 PLEKHG2Q9H7P9 1386 aa13.6□□□□□ -0.23
SKA2-208ENST00000583927 MEGF6O75095 1541 aa13.6□□□□□ -0.23
SKA2-208ENST00000583927 ADRA2BP18089 450 aa13.6□□□□□ -0.23
SKA2-208ENST00000583927 NBPF6Q5VWK0 638 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms