RNA–Protein interactions for RNA: ENST00000579969.1

SNORD53-201, Transcript of small nucleolar RNA, C/D box 53, humanhuman

BASIC

Gene SNORD53, Length 78 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD53-201ENST00000579969 CDCA7Q9BWT1 371 aaPredicted RBP3.69□□□□□ -1.82
SNORD53-201ENST00000579969 PRDM10Q9NQV6 1147 aa3.69□□□□□ -1.82
SNORD53-201ENST00000579969 POGKQ9P215 609 aa3.69□□□□□ -1.82
SNORD53-201ENST00000579969 KAT6BQ8WYB5 2073 aa3.69□□□□□ -1.82
SNORD53-201ENST00000579969 PNPLA7Q6ZV29 1317 aa3.69□□□□□ -1.82
SNORD53-201ENST00000579969 SBF2Q86WG5 1849 aa3.68□□□□□ -1.82
SNORD53-201ENST00000579969 ANKRD30BQ9BXX2 1392 aa3.68□□□□□ -1.82
SNORD53-201ENST00000579969 ABCA3Q99758 1704 aa3.68□□□□□ -1.82
SNORD53-201ENST00000579969 ZBTB7CA1YPR0 619 aa3.68□□□□□ -1.82
SNORD53-201ENST00000579969 GCP02774 474 aa3.68□□□□□ -1.82
SNORD53-201ENST00000579969 RGS19P49795 217 aa3.68□□□□□ -1.82
SNORD53-201ENST00000579969 SLC27A3Q5K4L6 730 aa3.68□□□□□ -1.82
SNORD53-201ENST00000579969 COL23A1Q86Y22 540 aaPredicted RBP3.68□□□□□ -1.82
SNORD53-201ENST00000579969 ABTB2Q8N961 1025 aa3.68□□□□□ -1.82
SNORD53-201ENST00000579969 RRAGCQ9HB90 399 aa3.68□□□□□ -1.82
SNORD53-201ENST00000579969 BCL9O00512 1426 aa3.68□□□□□ -1.82
SNORD53-201ENST00000579969 ATP7BP35670 1465 aa3.67□□□□□ -1.82
SNORD53-201ENST00000579969 FMN2Q9NZ56 1722 aa3.67□□□□□ -1.82
SNORD53-201ENST00000579969 RGPD3A6NKT7 1758 aaPredicted RBP3.67□□□□□ -1.82
SNORD53-201ENST00000579969 RGPD4Q7Z3J3 1758 aa3.67□□□□□ -1.82
SNORD53-201ENST00000579969 CCDC85CA6NKD9 419 aa3.67□□□□□ -1.82
SNORD53-201ENST00000579969 KCNQ4P56696 695 aa3.67□□□□□ -1.82
SNORD53-201ENST00000579969 MSL1Q68DK7 614 aa3.67□□□□□ -1.82
SNORD53-201ENST00000579969 ARHGAP27Q6ZUM4 889 aa3.67□□□□□ -1.82
SNORD53-201ENST00000579969 NLRP13Q86W25 1043 aa3.67□□□□□ -1.82
SNORD53-201ENST00000579969 SMC1BQ8NDV3 1235 aa3.67□□□□□ -1.82
SNORD53-201ENST00000579969 ABHD8Q96I13 439 aa3.67□□□□□ -1.82
SNORD53-201ENST00000579969 C14orf93Q9H972 538 aaKnown RBP3.67□□□□□ -1.82
SNORD53-201ENST00000579969 CRB1P82279 1406 aa3.67□□□□□ -1.82
SNORD53-201ENST00000579969 TNS2Q63HR2 1409 aa3.67□□□□□ -1.82
SNORD53-201ENST00000579969 YTHDC2Q9H6S0 1430 aaKnown RBP3.67□□□□□ -1.82
SNORD53-201ENST00000579969 IGSF1Q8N6C5 1336 aa3.67□□□□□ -1.82
SNORD53-201ENST00000579969 PRR36Q9H6K5 1346 aa3.67□□□□□ -1.82
SNORD53-201ENST00000579969 CPDO75976 1380 aa3.66□□□□□ -1.82
SNORD53-201ENST00000579969 WASLO00401 505 aaPredicted RBP3.66□□□□□ -1.82
SNORD53-201ENST00000579969 FOXN1O15353 648 aa3.66□□□□□ -1.82
SNORD53-201ENST00000579969 CTCFP49711 727 aaPredicted RBP3.66□□□□□ -1.82
SNORD53-201ENST00000579969 CFAP70Q5T0N1 1121 aa3.66□□□□□ -1.82
SNORD53-201ENST00000579969 NUDT16Q96DE0 195 aaKnown RBP3.66□□□□□ -1.82
SNORD53-201ENST00000579969 CARD10Q9BWT7 1032 aa3.66□□□□□ -1.82
SNORD53-201ENST00000579969 AXIN2Q9Y2T1 843 aa3.66□□□□□ -1.82
SNORD53-201ENST00000579969 ANKARQ7Z5J8 1434 aa3.66□□□□□ -1.82
SNORD53-201ENST00000579969 WDR90Q96KV7 1748 aa3.66□□□□□ -1.82
SNORD53-201ENST00000579969 PEAK1Q9H792 1746 aa3.66□□□□□ -1.82
SNORD53-201ENST00000579969 USP19O94966 1318 aa3.66□□□□□ -1.82
SNORD53-201ENST00000579969 MINK1Q8N4C8 1332 aaPredicted RBP3.66□□□□□ -1.82
SNORD53-201ENST00000579969 ALS2Q96Q42 1657 aa3.65□□□□□ -1.82
SNORD53-201ENST00000579969 PARP4Q9UKK3 1724 aaKnown RBP3.65□□□□□ -1.82
SNORD53-201ENST00000579969 USP6P35125 1406 aa3.65□□□□□ -1.83
SNORD53-201ENST00000579969 CSB-PGBD3P0DP91 1061 aa3.65□□□□□ -1.83
SNORD53-201ENST00000579969 ITGAEP38570 1179 aa3.65□□□□□ -1.83
SNORD53-201ENST00000579969 LBX1P52954 281 aa3.65□□□□□ -1.83
SNORD53-201ENST00000579969 C9orf131Q5VYM1 1079 aa3.65□□□□□ -1.83
SNORD53-201ENST00000579969 CLTCL1P53675 1640 aa3.65□□□□□ -1.83
SNORD53-201ENST00000579969 PHRF1Q9P1Y6 1649 aaKnown RBP3.65□□□□□ -1.83
SNORD53-201ENST00000579969 COL5A2P05997 1499 aaPredicted RBP3.65□□□□□ -1.83
SNORD53-201ENST00000579969 WDR17Q8IZU2 1322 aa3.65□□□□□ -1.83
SNORD53-201ENST00000579969 KDM2BQ8NHM5 1336 aa3.65□□□□□ -1.83
SNORD53-201ENST00000579969 KIF1BO60333 1816 aa3.65□□□□□ -1.83
SNORD53-201ENST00000579969 PDE4DIPQ5VU43 2346 aa3.65□□□□□ -1.83
SNORD53-201ENST00000579969 BRD4O60885 1362 aaPredicted RBP3.64□□□□□ -1.83
SNORD53-201ENST00000579969 ROCK1Q13464 1354 aa3.64□□□□□ -1.83
SNORD53-201ENST00000579969 TRPM3Q9HCF6 1732 aaPredicted RBP3.64□□□□□ -1.83
SNORD53-201ENST00000579969 VPS8Q8N3P4 1428 aa3.64□□□□□ -1.83
SNORD53-201ENST00000579969 NLRP6P59044 892 aa3.64□□□□□ -1.83
SNORD53-201ENST00000579969 FLAD1Q8NFF5 587 aa3.64□□□□□ -1.83
SNORD53-201ENST00000579969 AIDAQ96BJ3 306 aa3.64□□□□□ -1.83
SNORD53-201ENST00000579969 MKRN1Q9UHC7 482 aaKnown RBP3.64□□□□□ -1.83
SNORD53-201ENST00000579969 TRAK1Q9UPV9 953 aa3.64□□□□□ -1.83
SNORD53-201ENST00000579969 BCS1LQ9Y276 419 aa3.64□□□□□ -1.83
SNORD53-201ENST00000579969 ACEP12821 1306 aa3.64□□□□□ -1.83
SNORD53-201ENST00000579969 ARHGEF28Q8N1W1 1705 aaKnown RBP3.64□□□□□ -1.83
SNORD53-201ENST00000579969 PLEKHG3A1L390 1219 aa3.63□□□□□ -1.83
SNORD53-201ENST00000579969 FCHSD2O94868 740 aa3.63□□□□□ -1.83
SNORD53-201ENST00000579969 VEGFAP15692 232 aaPredicted RBP3.63□□□□□ -1.83
SNORD53-201ENST00000579969 PRIM1P49642 420 aaKnown RBP3.63□□□□□ -1.83
SNORD53-201ENST00000579969 DDX54Q8TDD1 881 aaKnown RBP3.63□□□□□ -1.83
SNORD53-201ENST00000579969 SYTL4Q96C24 671 aaPredicted RBP3.63□□□□□ -1.83
SNORD53-201ENST00000579969 CFAP44Q96MT7 982 aa3.63□□□□□ -1.83
SNORD53-201ENST00000579969 SLC4A1APQ9BWU0 796 aaKnown RBP3.63□□□□□ -1.83
SNORD53-201ENST00000579969 WBP1LQ9NX94 342 aa3.63□□□□□ -1.83
SNORD53-201ENST00000579969 CCNL1Q9UK58 526 aaPredicted RBP3.63□□□□□ -1.83
SNORD53-201ENST00000579969 CCDC61Q9Y6R9 512 aa3.63□□□□□ -1.83
SNORD53-201ENST00000579969 EIF3AQ14152 1382 aaKnown RBP3.63□□□□□ -1.83
SNORD53-201ENST00000579969 COL24A1Q17RW2 1714 aa3.62□□□□□ -1.83
SNORD53-201ENST00000579969 TULP4Q9NRJ4 1543 aa3.62□□□□□ -1.83
SNORD53-201ENST00000579969 A0A0G2JLW4 131 aa3.62□□□□□ -1.83
SNORD53-201ENST00000579969 HMGB2P26583 209 aaKnown RBP3.62□□□□□ -1.83
SNORD53-201ENST00000579969 TGFB2P61812 414 aa3.62□□□□□ -1.83
SNORD53-201ENST00000579969 SMIM5Q71RC9 77 aa3.62□□□□□ -1.83
SNORD53-201ENST00000579969 ARHGEF25Q86VW2 580 aa3.62□□□□□ -1.83
SNORD53-201ENST00000579969 CDK19Q9BWU1 502 aa3.62□□□□□ -1.83
SNORD53-201ENST00000579969 CREBZFQ9NS37 354 aa3.62□□□□□ -1.83
SNORD53-201ENST00000579969 DAXXQ9UER7 740 aaPredicted RBP3.62□□□□□ -1.83
SNORD53-201ENST00000579969 PAPPAQ13219 1627 aa3.62□□□□□ -1.83
SNORD53-201ENST00000579969 TOPAZ1Q8N9V7 1692 aa3.62□□□□□ -1.83
SNORD53-201ENST00000579969 IFT172Q9UG01 1749 aa3.61□□□□□ -1.83
SNORD53-201ENST00000579969 CRYBG1Q9Y4K1 1723 aa3.61□□□□□ -1.83
SNORD53-201ENST00000579969 LOC105371045A0A1W2PR82 267 aa3.61□□□□□ -1.83
SNORD53-201ENST00000579969 HSPA8P11142 646 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 973 ms