RNA–Protein interactions for RNA: ENST00000579324.5

NUP85-211, Transcript of nucleoporin 85, humanhuman

TSL 2 BASIC

Gene NUP85, Length 2,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-211ENST00000579324 SSH2Q76I76 1423 aa14.06□□□□□ -0.16
NUP85-211ENST00000579324 RLBP1P12271 317 aa14.06□□□□□ -0.16
NUP85-211ENST00000579324 TSR2Q969E8 191 aaKnown RBP14.06□□□□□ -0.16
NUP85-211ENST00000579324 COG3Q96JB2 828 aa14.06□□□□□ -0.16
NUP85-211ENST00000579324 IGHDP01880 384 aa14.05□□□□□ -0.16
NUP85-211ENST00000579324 KCNA6P17658 529 aa14.05□□□□□ -0.16
NUP85-211ENST00000579324 PRKAR2BP31323 418 aa14.05□□□□□ -0.16
NUP85-211ENST00000579324 USP6P35125 1406 aa14.05□□□□□ -0.16
NUP85-211ENST00000579324 PIP4K2BP78356 416 aa14.05□□□□□ -0.16
NUP85-211ENST00000579324 EXOSC9Q06265 439 aaKnown RBP14.05□□□□□ -0.16
NUP85-211ENST00000579324 KLHL34Q8N239 644 aa14.05□□□□□ -0.16
NUP85-211ENST00000579324 FRAT1Q92837 279 aaPredicted RBP14.05□□□□□ -0.16
NUP85-211ENST00000579324 PKNOX2Q96KN3 472 aa14.05□□□□□ -0.16
NUP85-211ENST00000579324 TNNQ9UQP3 1299 aa14.05□□□□□ -0.16
NUP85-211ENST00000579324 NOP58Q9Y2X3 529 aaKnown RBP14.05□□□□□ -0.16
NUP85-211ENST00000579324 NFE2L2Q16236 605 aa14.04□□□□□ -0.16
NUP85-211ENST00000579324 PROSER2Q86WR7 435 aaPredicted RBP14.04□□□□□ -0.16
NUP85-211ENST00000579324 TTC21BQ7Z4L5 1316 aa14.04□□□□□ -0.16
NUP85-211ENST00000579324 BCL2L13Q9BXK5 485 aa14.03□□□□□ -0.16
NUP85-211ENST00000579324 ACEP12821 1306 aa14.03□□□□□ -0.16
NUP85-211ENST00000579324 USP31Q70CQ4 1352 aa14.02□□□□□ -0.16
NUP85-211ENST00000579324 PPM1GO15355 546 aaPredicted RBP14.02□□□□□ -0.16
NUP85-211ENST00000579324 ZKSCAN2Q63HK3 967 aa14.02□□□□□ -0.16
NUP85-211ENST00000579324 PHACTR3Q96KR7 559 aa14.02□□□□□ -0.16
NUP85-211ENST00000579324 AMOTL2Q9Y2J4 779 aa14.02□□□□□ -0.17
NUP85-211ENST00000579324 RGPD1P0DJD0 1748 aa14.01□□□□□ -0.17
NUP85-211ENST00000579324 TOM1O60784 492 aa14.01□□□□□ -0.17
NUP85-211ENST00000579324 SSH1Q8WYL5 1049 aa14.01□□□□□ -0.17
NUP85-211ENST00000579324 PEAK1Q9H792 1746 aa14.01□□□□□ -0.17
NUP85-211ENST00000579324 TMEM94Q12767 1356 aa14.01□□□□□ -0.17
NUP85-211ENST00000579324 PAK3O75914 559 aaPredicted RBP14□□□□□ -0.17
NUP85-211ENST00000579324 MVPQ14764 893 aaKnown RBP14□□□□□ -0.17
NUP85-211ENST00000579324 C8orf34Q49A92 452 aa14□□□□□ -0.17
NUP85-211ENST00000579324 HMOX1P09601 288 aa14□□□□□ -0.17
NUP85-211ENST00000579324 RRS1Q15050 365 aaKnown RBP14□□□□□ -0.17
NUP85-211ENST00000579324 FAM161AQ3B820 660 aa14□□□□□ -0.17
NUP85-211ENST00000579324 PMFBP1Q8TBY8 1022 aa14□□□□□ -0.17
NUP85-211ENST00000579324 PCDHB15Q9Y5E8 787 aa14□□□□□ -0.17
NUP85-211ENST00000579324 PIK3R4Q99570 1358 aa13.99□□□□□ -0.17
NUP85-211ENST00000579324 DLG5Q8TDM6 1919 aa13.99□□□□□ -0.17
NUP85-211ENST00000579324 BRPF1P55201 1214 aaPredicted RBP13.99□□□□□ -0.17
NUP85-211ENST00000579324 C14orf37Q86TY3 774 aa13.99□□□□□ -0.17
NUP85-211ENST00000579324 DZIP1LQ8IYY4 767 aaKnown RBP13.99□□□□□ -0.17
NUP85-211ENST00000579324 SMC4Q9NTJ3 1288 aa13.99□□□□□ -0.17
NUP85-211ENST00000579324 VIRMAQ69YN4 1812 aaKnown RBP13.99□□□□□ -0.17
NUP85-211ENST00000579324 NEFMP07197 916 aa13.98□□□□□ -0.17
NUP85-211ENST00000579324 ZNF853P0CG23 659 aa13.98□□□□□ -0.17
NUP85-211ENST00000579324 ALDH1L2Q3SY69 923 aa13.98□□□□□ -0.17
NUP85-211ENST00000579324 ZNF428Q96B54 188 aa13.98□□□□□ -0.17
NUP85-211ENST00000579324 TRIM27P14373 513 aa13.98□□□□□ -0.17
NUP85-211ENST00000579324 CALD1Q05682 793 aaKnown RBP13.98□□□□□ -0.17
NUP85-211ENST00000579324 ANO8Q9HCE9 1232 aaPredicted RBP13.98□□□□□ -0.17
NUP85-211ENST00000579324 TTC21AQ8NDW8 1320 aa13.98□□□□□ -0.17
NUP85-211ENST00000579324 ANKARQ7Z5J8 1434 aa13.98□□□□□ -0.17
NUP85-211ENST00000579324 IFT57Q9NWB7 429 aa13.97□□□□□ -0.17
NUP85-211ENST00000579324 USP54Q70EL1 1684 aa13.97□□□□□ -0.17
NUP85-211ENST00000579324 CHD2O14647 1828 aaKnown RBP13.97□□□□□ -0.17
NUP85-211ENST00000579324 FMN2Q9NZ56 1722 aa13.97□□□□□ -0.17
NUP85-211ENST00000579324 KIF16BQ96L93 1317 aa13.97□□□□□ -0.17
NUP85-211ENST00000579324 ATF7IPQ6VMQ6 1270 aa13.97□□□□□ -0.17
NUP85-211ENST00000579324 EIF4A2Q14240 407 aaKnown RBP13.96□□□□□ -0.17
NUP85-211ENST00000579324 RGS3P49796 1198 aa13.95□□□□□ -0.18
NUP85-211ENST00000579324 LMOD3Q0VAK6 560 aa13.95□□□□□ -0.18
NUP85-211ENST00000579324 ZBTB47Q9UFB7 747 aaPredicted RBP13.95□□□□□ -0.18
NUP85-211ENST00000579324 RGPD8O14715 1765 aaPredicted RBP13.95□□□□□ -0.18
NUP85-211ENST00000579324 PIK3C2AO00443 1686 aa13.95□□□□□ -0.18
NUP85-211ENST00000579324 GNAI1P63096 354 aa13.95□□□□□ -0.18
NUP85-211ENST00000579324 NPM2Q86SE8 214 aaKnown RBP13.95□□□□□ -0.18
NUP85-211ENST00000579324 FTSJ3Q8IY81 847 aaKnown RBP13.95□□□□□ -0.18
NUP85-211ENST00000579324 NOB1Q9ULX3 412 aaKnown RBP13.95□□□□□ -0.18
NUP85-211ENST00000579324 NWD1Q149M9 1564 aa13.94□□□□□ -0.18
NUP85-211ENST00000579324 XIRP1Q702N8 1843 aaKnown RBP13.94□□□□□ -0.18
NUP85-211ENST00000579324 THUMPD2Q9BTF0 503 aaKnown RBP13.93□□□□□ -0.18
NUP85-211ENST00000579324 RWDD1Q9H446 243 aaPredicted RBP13.93□□□□□ -0.18
NUP85-211ENST00000579324 MARF1Q9Y4F3 1742 aaKnown RBP13.93□□□□□ -0.18
NUP85-211ENST00000579324 NUTM2FA1L443 756 aa13.93□□□□□ -0.18
NUP85-211ENST00000579324 VAMP4O75379 141 aa13.93□□□□□ -0.18
NUP85-211ENST00000579324 DDX19BQ9UMR2 479 aa13.93□□□□□ -0.18
NUP85-211ENST00000579324 MSH6P52701 1360 aa13.92□□□□□ -0.18
NUP85-211ENST00000579324 IPO8O15397 1037 aaKnown RBP13.92□□□□□ -0.18
NUP85-211ENST00000579324 CFAP44Q96MT7 982 aa13.92□□□□□ -0.18
NUP85-211ENST00000579324 MBIPQ9NS73 344 aa13.92□□□□□ -0.18
NUP85-211ENST00000579324 ARHGEF10O15013 1369 aa13.92□□□□□ -0.18
NUP85-211ENST00000579324 HDAC1Q13547 482 aaPredicted RBP13.91□□□□□ -0.18
NUP85-211ENST00000579324 HOMEZQ8IX15 550 aa13.91□□□□□ -0.18
NUP85-211ENST00000579324 AEBP1Q8IUX7 1158 aa13.91□□□□□ -0.18
NUP85-211ENST00000579324 TMEM57Q8N5G2 664 aa13.91□□□□□ -0.18
NUP85-211ENST00000579324 MRPL50Q8N5N7 158 aaKnown RBP13.91□□□□□ -0.18
NUP85-211ENST00000579324 ARHGAP45Q92619 1136 aa13.91□□□□□ -0.18
NUP85-211ENST00000579324 SBNO1A3KN83 1393 aa13.91□□□□□ -0.18
NUP85-211ENST00000579324 DDRGK1Q96HY6 314 aa13.9□□□□□ -0.18
NUP85-211ENST00000579324 ZBTB40Q9NUA8 1239 aa13.9□□□□□ -0.18
NUP85-211ENST00000579324 PDZRN3Q9UPQ7 1066 aa13.9□□□□□ -0.18
NUP85-211ENST00000579324 MAP3K19Q56UN5 1328 aa13.9□□□□□ -0.18
NUP85-211ENST00000579324 HSPA1LP34931 641 aa13.9□□□□□ -0.18
NUP85-211ENST00000579324 HSP90AB2PQ58FF8 381 aa13.9□□□□□ -0.18
NUP85-211ENST00000579324 SULT6B1Q6IMI4 303 aa13.9□□□□□ -0.18
NUP85-211ENST00000579324 FLT4P35916 1363 aa13.9□□□□□ -0.19
NUP85-211ENST00000579324 ITPRIPQ8IWB1 547 aa13.89□□□□□ -0.19
NUP85-211ENST00000579324 TSPYL6Q8N831 410 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms