RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 NFAT5O94916 1531 aa24.2■■□□□ 1.47
ITGB4-205ENST00000579211 ONECUT3O60422 494 aaPredicted RBP24.2■■□□□ 1.46
ITGB4-205ENST00000579211 COL5A2P05997 1499 aaPredicted RBP24.19■■□□□ 1.46
ITGB4-205ENST00000579211 CSB-PGBD3P0DP91 1061 aa24.19■■□□□ 1.46
ITGB4-205ENST00000579211 TOM1L2Q6ZVM7 507 aa24.18■■□□□ 1.46
ITGB4-205ENST00000579211 KRT27Q7Z3Y8 459 aa24.17■■□□□ 1.46
ITGB4-205ENST00000579211 GGNBP2Q9H3C7 697 aa24.16■■□□□ 1.46
ITGB4-205ENST00000579211 AXIN2Q9Y2T1 843 aa24.16■■□□□ 1.46
ITGB4-205ENST00000579211 OVOS2A0A0J9YW53 1432 aa24.16■■□□□ 1.46
ITGB4-205ENST00000579211 OVOS2Q6IE36 1432 aa24.16■■□□□ 1.46
ITGB4-205ENST00000579211 TCP11L2Q8N4U5 519 aa24.15■■□□□ 1.46
ITGB4-205ENST00000579211 CRB1P82279 1406 aa24.15■■□□□ 1.46
ITGB4-205ENST00000579211 FYB1O15117 783 aa24.14■■□□□ 1.45
ITGB4-205ENST00000579211 NSD3Q9BZ95 1437 aa24.14■■□□□ 1.45
ITGB4-205ENST00000579211 THRAP3Q9Y2W1 955 aaKnown RBP24.13■■□□□ 1.45
ITGB4-205ENST00000579211 THSD7AQ9UPZ6 1657 aa24.13■■□□□ 1.45
ITGB4-205ENST00000579211 ABCC6O95255 1503 aa24.13■■□□□ 1.45
ITGB4-205ENST00000579211 WDR17Q8IZU2 1322 aa24.12■■□□□ 1.45
ITGB4-205ENST00000579211 BARGINQ6ZT62 677 aa24.11■■□□□ 1.45
ITGB4-205ENST00000579211 CARD14Q9BXL6 1004 aa24.11■■□□□ 1.45
ITGB4-205ENST00000579211 MAP2P11137 1827 aaKnown RBP24.1■■□□□ 1.45
ITGB4-205ENST00000579211 WNK3Q9BYP7 1800 aa24.1■■□□□ 1.45
ITGB4-205ENST00000579211 AMPHP49418 695 aa24.1■■□□□ 1.45
ITGB4-205ENST00000579211 PDE3BQ13370 1112 aa24.1■■□□□ 1.45
ITGB4-205ENST00000579211 CGNL1Q0VF96 1302 aa24.09■■□□□ 1.45
ITGB4-205ENST00000579211 SF3B2Q13435 895 aaKnown RBP24.08■■□□□ 1.45
ITGB4-205ENST00000579211 CCDC125Q86Z20 511 aa24.08■■□□□ 1.45
ITGB4-205ENST00000579211 PANK3Q9H999 370 aa24.08■■□□□ 1.45
ITGB4-205ENST00000579211 PARP4Q9UKK3 1724 aaKnown RBP24.07■■□□□ 1.44
ITGB4-205ENST00000579211 C11orf95C9JLR9 678 aaPredicted RBP24.07■■□□□ 1.44
ITGB4-205ENST00000579211 EP400Q96L91 3159 aa24.07■■□□□ 1.44
ITGB4-205ENST00000579211 ANKRD26Q9UPS8 1709 aa24.07■■□□□ 1.44
ITGB4-205ENST00000579211 FBLN1P23142 703 aa24.06■■□□□ 1.44
ITGB4-205ENST00000579211 NLRP2Q9NX02 1062 aa24.06■■□□□ 1.44
ITGB4-205ENST00000579211 FAM208AQ9UK61 1670 aaKnown RBP24.05■■□□□ 1.44
ITGB4-205ENST00000579211 ANKRD24Q8TF21 1146 aa24.05■■□□□ 1.44
ITGB4-205ENST00000579211 IP6K1Q92551 441 aa24.05■■□□□ 1.44
ITGB4-205ENST00000579211 LTV1Q96GA3 475 aaPredicted RBP24.05■■□□□ 1.44
ITGB4-205ENST00000579211 CARD10Q9BWT7 1032 aa24.05■■□□□ 1.44
ITGB4-205ENST00000579211 FAM182BQ5T319 152 aa24.04■■□□□ 1.44
ITGB4-205ENST00000579211 BLMP54132 1417 aaPredicted RBP24.03■■□□□ 1.44
ITGB4-205ENST00000579211 MAP3K19Q56UN5 1328 aa24.03■■□□□ 1.44
ITGB4-205ENST00000579211 RGPD2P0DJD1 1756 aa24.03■■□□□ 1.44
ITGB4-205ENST00000579211 KAT6BQ8WYB5 2073 aa24.03■■□□□ 1.44
ITGB4-205ENST00000579211 RGPD1P0DJD0 1748 aa24.02■■□□□ 1.44
ITGB4-205ENST00000579211 RRS1Q15050 365 aaKnown RBP24.02■■□□□ 1.44
ITGB4-205ENST00000579211 CDCA7Q9BWT1 371 aaPredicted RBP24.02■■□□□ 1.44
ITGB4-205ENST00000579211 ERBB3P21860 1342 aa24.02■■□□□ 1.44
ITGB4-205ENST00000579211 KIF7Q2M1P5 1343 aa24.02■■□□□ 1.44
ITGB4-205ENST00000579211 CCDC7Q96M83 1385 aa24.02■■□□□ 1.44
ITGB4-205ENST00000579211 DDB1Q16531 1140 aa24.01■■□□□ 1.43
ITGB4-205ENST00000579211 HOXC9P31274 260 aa24■■□□□ 1.43
ITGB4-205ENST00000579211 KNSTRNQ9Y448 316 aa24■■□□□ 1.43
ITGB4-205ENST00000579211 FAM196AQ6ZSG2 479 aa23.99■■□□□ 1.43
ITGB4-205ENST00000579211 LRRC37A3O60309 1634 aa23.98■■□□□ 1.43
ITGB4-205ENST00000579211 RTL1A6NKG5 1358 aa23.97■■□□□ 1.43
ITGB4-205ENST00000579211 PPM1GO15355 546 aaPredicted RBP23.97■■□□□ 1.43
ITGB4-205ENST00000579211 SMG6Q86US8 1419 aaKnown RBP23.96■■□□□ 1.43
ITGB4-205ENST00000579211 EXOC5O00471 708 aa23.96■■□□□ 1.43
ITGB4-205ENST00000579211 TNNT2P45379 298 aaPredicted RBP23.96■■□□□ 1.43
ITGB4-205ENST00000579211 SBF2Q86WG5 1849 aa23.94■■□□□ 1.42
ITGB4-205ENST00000579211 PEAK1Q9H792 1746 aa23.93■■□□□ 1.42
ITGB4-205ENST00000579211 IL2RBP14784 551 aa23.93■■□□□ 1.42
ITGB4-205ENST00000579211 FLT4P35916 1363 aa23.92■■□□□ 1.42
ITGB4-205ENST00000579211 BAG6P46379 1132 aa23.92■■□□□ 1.42
ITGB4-205ENST00000579211 MORC1Q86VD1 984 aa23.92■■□□□ 1.42
ITGB4-205ENST00000579211 NSD2O96028 1365 aa23.91■■□□□ 1.42
ITGB4-205ENST00000579211 KIF24Q5T7B8 1368 aa23.91■■□□□ 1.42
ITGB4-205ENST00000579211 TRIM37O94972 964 aa23.91■■□□□ 1.42
ITGB4-205ENST00000579211 EMILIN1Q9Y6C2 1016 aa23.91■■□□□ 1.42
ITGB4-205ENST00000579211 TNS1Q9HBL0 1735 aaKnown RBP23.9■■□□□ 1.42
ITGB4-205ENST00000579211 HSP90AB2PQ58FF8 381 aa23.9■■□□□ 1.42
ITGB4-205ENST00000579211 DEFB132Q7Z7B7 95 aa23.89■■□□□ 1.41
ITGB4-205ENST00000579211 OVOS2A0A0G2JMS6 1433 aa23.89■■□□□ 1.41
ITGB4-205ENST00000579211 INSRP06213 1382 aa23.89■■□□□ 1.41
ITGB4-205ENST00000579211 DISP2A7MBM2 1401 aa23.88■■□□□ 1.41
ITGB4-205ENST00000579211 WASHC2AQ641Q2 1341 aa23.87■■□□□ 1.41
ITGB4-205ENST00000579211 APBA3O96018 575 aa23.85■■□□□ 1.41
ITGB4-205ENST00000579211 MARCH10Q8NA82 808 aaPredicted RBP23.85■■□□□ 1.41
ITGB4-205ENST00000579211 POLKQ9UBT6 870 aa23.85■■□□□ 1.41
ITGB4-205ENST00000579211 NBPF6Q5VWK0 638 aa23.84■■□□□ 1.41
ITGB4-205ENST00000579211 NBPF4Q96M43 638 aa23.84■■□□□ 1.41
ITGB4-205ENST00000579211 TNS2Q63HR2 1409 aa23.84■■□□□ 1.41
ITGB4-205ENST00000579211 EN1Q05925 392 aaPredicted RBP23.83■■□□□ 1.41
ITGB4-205ENST00000579211 CNGB1Q14028 1251 aaPredicted RBP23.83■■□□□ 1.41
ITGB4-205ENST00000579211 USHBP1Q8N6Y0 703 aa23.83■■□□□ 1.41
ITGB4-205ENST00000579211 RAPGEF4Q8WZA2 1011 aa23.82■■□□□ 1.4
ITGB4-205ENST00000579211 CC2D1BQ5T0F9 858 aaKnown RBP23.8■■□□□ 1.4
ITGB4-205ENST00000579211 DDX54Q8TDD1 881 aaKnown RBP23.8■■□□□ 1.4
ITGB4-205ENST00000579211 TATP17735 454 aaPredicted RBP23.79■■□□□ 1.4
ITGB4-205ENST00000579211 AMER1Q5JTC6 1135 aaPredicted RBP23.79■■□□□ 1.4
ITGB4-205ENST00000579211 PER1O15534 1290 aaPredicted RBP23.77■■□□□ 1.4
ITGB4-205ENST00000579211 ZCRB1Q8TBF4 217 aaKnown RBP23.77■■□□□ 1.4
ITGB4-205ENST00000579211 EZH2Q15910 746 aaKnown RBP23.75■■□□□ 1.39
ITGB4-205ENST00000579211 BCL11BQ9C0K0 894 aaPredicted RBP23.75■■□□□ 1.39
ITGB4-205ENST00000579211 SHANK3Q9BYB0 1731 aa23.75■■□□□ 1.39
ITGB4-205ENST00000579211 ZEB1P37275 1124 aaPredicted RBP23.74■■□□□ 1.39
ITGB4-205ENST00000579211 ACSBG1Q96GR2 724 aa23.74■■□□□ 1.39
ITGB4-205ENST00000579211 MEGF6O75095 1541 aa23.74■■□□□ 1.39
ITGB4-205ENST00000579211 NHSQ6T4R5 1651 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms