RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 PPFIBP1Q86W92 1011 aa6.04□□□□□ -1.44
NF1-219ENST00000579081 CNTROBQ8N137 903 aa6.04□□□□□ -1.44
NF1-219ENST00000579081 FMNL2Q96PY5 1086 aa6.04□□□□□ -1.44
NF1-219ENST00000579081 DNAJC2Q99543 621 aaKnown RBP6.04□□□□□ -1.44
NF1-219ENST00000579081 RIPK4P57078 832 aa6.04□□□□□ -1.44
NF1-219ENST00000579081 STK38Q15208 465 aa6.04□□□□□ -1.44
NF1-219ENST00000579081 RBM42Q9BTD8 480 aaKnown RBP6.04□□□□□ -1.44
NF1-219ENST00000579081 TOP2AP11388 1531 aaKnown RBP6.04□□□□□ -1.44
NF1-219ENST00000579081 TMEM87AQ8NBN3 555 aa6.04□□□□□ -1.44
NF1-219ENST00000579081 UBE2Q2Q8WVN8 375 aa6.04□□□□□ -1.44
NF1-219ENST00000579081 MYBBP1AQ9BQG0 1328 aaKnown RBP6.04□□□□□ -1.44
NF1-219ENST00000579081 UBTFL1P0CB47 393 aaPredicted RBP6.04□□□□□ -1.44
NF1-219ENST00000579081 RBM5P52756 815 aaKnown RBP eCLIP6.04□□□□□ -1.44
NF1-219ENST00000579081 ERC1Q8IUD2 1116 aa6.04□□□□□ -1.44
NF1-219ENST00000579081 CRBNQ96SW2 442 aa6.04□□□□□ -1.44
NF1-219ENST00000579081 CCDC88BA6NC98 1476 aa6.03□□□□□ -1.44
NF1-219ENST00000579081 SPDYE4A6NLX3 237 aa6.03□□□□□ -1.44
NF1-219ENST00000579081 POTEJP0CG39 1038 aa6.03□□□□□ -1.44
NF1-219ENST00000579081 TTC39AQ5SRH9 613 aa6.03□□□□□ -1.44
NF1-219ENST00000579081 RBM26Q5T8P6 1007 aaKnown RBP6.03□□□□□ -1.44
NF1-219ENST00000579081 PANK3Q9H999 370 aa6.03□□□□□ -1.44
NF1-219ENST00000579081 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.03□□□□□ -1.441e-6■■■■■ 34.9
NF1-219ENST00000579081 WDHD1O75717 1129 aaPredicted RBP6.03□□□□□ -1.44
NF1-219ENST00000579081 PDE6BP35913 854 aa6.03□□□□□ -1.44
NF1-219ENST00000579081 CCDC38Q502W7 563 aa6.03□□□□□ -1.44
NF1-219ENST00000579081 JAKMIP3Q5VZ66 844 aa6.03□□□□□ -1.44
NF1-219ENST00000579081 BMP2KQ9NSY1 1161 aaPredicted RBP6.03□□□□□ -1.44
NF1-219ENST00000579081 CETN2P41208 172 aa6.03□□□□□ -1.44
NF1-219ENST00000579081 HNRNPMP52272 730 aaKnown RBP eCLIP6.03□□□□□ -1.448e-7■■■■■ 30.6
NF1-219ENST00000579081 CCDC57Q2TAC2 916 aa6.03□□□□□ -1.44
NF1-219ENST00000579081 CENPHQ9H3R5 247 aa6.03□□□□□ -1.44
NF1-219ENST00000579081 KIF15Q9NS87 1388 aa6.03□□□□□ -1.44
NF1-219ENST00000579081 EIF3JO75822 258 aaKnown RBP6.03□□□□□ -1.44
NF1-219ENST00000579081 GNAI1P63096 354 aa6.03□□□□□ -1.44
NF1-219ENST00000579081 SERPINC1P01008 464 aa6.03□□□□□ -1.44
NF1-219ENST00000579081 EPB41L2O43491 1005 aaKnown RBP6.03□□□□□ -1.44
NF1-219ENST00000579081 ANAPC15P60006 121 aa6.03□□□□□ -1.44
NF1-219ENST00000579081 JMYQ8N9B5 988 aa6.03□□□□□ -1.44
NF1-219ENST00000579081 ZMYND15Q9H091 742 aa6.03□□□□□ -1.44
NF1-219ENST00000579081 CNNM1Q9NRU3 951 aa6.03□□□□□ -1.44
NF1-219ENST00000579081 ANKRD18BA2A2Z9 1011 aa6.02□□□□□ -1.45
NF1-219ENST00000579081 C11orf95C9JLR9 678 aaPredicted RBP6.02□□□□□ -1.45
NF1-219ENST00000579081 CLGNO14967 610 aa6.02□□□□□ -1.45
NF1-219ENST00000579081 ERLIN1O75477 346 aa6.02□□□□□ -1.45
NF1-219ENST00000579081 ZNF76P36508 570 aa6.02□□□□□ -1.45
NF1-219ENST00000579081 CCDC158Q5M9N0 1113 aa6.02□□□□□ -1.45
NF1-219ENST00000579081 LUZP1Q86V48 1076 aa6.02□□□□□ -1.45
NF1-219ENST00000579081 SPC24Q8NBT2 197 aa6.02□□□□□ -1.45
NF1-219ENST00000579081 DYDC1Q8WWB3 177 aa6.02□□□□□ -1.45
NF1-219ENST00000579081 TAF4BQ92750 862 aa6.02□□□□□ -1.45
NF1-219ENST00000579081 NOL7Q9UMY1 257 aaKnown RBP6.02□□□□□ -1.45
NF1-219ENST00000579081 CDC45O75419 566 aa6.02□□□□□ -1.45
NF1-219ENST00000579081 SSBP05455 408 aaKnown RBP eCLIP6.02□□□□□ -1.45
NF1-219ENST00000579081 SUDS3Q9H7L9 328 aaPredicted RBP6.02□□□□□ -1.45
NF1-219ENST00000579081 CUX2O14529 1486 aa6.02□□□□□ -1.45
NF1-219ENST00000579081 EXOC6Q8TAG9 804 aa6.02□□□□□ -1.45
NF1-219ENST00000579081 HIP1O00291 1037 aa6.02□□□□□ -1.45
NF1-219ENST00000579081 SCLT1Q96NL6 688 aa6.02□□□□□ -1.45
NF1-219ENST00000579081 GOLGA6L9A6NEM1 432 aa6.02□□□□□ -1.45
NF1-219ENST00000579081 ZSCAN29Q8IWY8 852 aaPredicted RBP6.02□□□□□ -1.45
NF1-219ENST00000579081 NACAP1Q9BZK3 213 aa6.02□□□□□ -1.45
NF1-219ENST00000579081 CARMIL1Q5VZK9 1371 aa6.02□□□□□ -1.45
NF1-219ENST00000579081 TRIM22Q8IYM9 498 aa6.02□□□□□ -1.45
NF1-219ENST00000579081 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.02□□□□□ -1.456e-7■■■□□ 18
NF1-219ENST00000579081 PPM1EQ8WY54 764 aa6.01□□□□□ -1.45
NF1-219ENST00000579081 CCDC69A6NI79 296 aa6.01□□□□□ -1.45
NF1-219ENST00000579081 RPAINQ86UA6 219 aa6.01□□□□□ -1.45
NF1-219ENST00000579081 APAF1O14727 1248 aa6.01□□□□□ -1.45
NF1-219ENST00000579081 PPFIA3O75145 1194 aa6.01□□□□□ -1.45
NF1-219ENST00000579081 DNAAF4Q8WXU2 420 aa6.01□□□□□ -1.45
NF1-219ENST00000579081 CEP63Q96MT8 703 aa6.01□□□□□ -1.45
NF1-219ENST00000579081 SLC26A8Q96RN1 970 aa6.01□□□□□ -1.45
NF1-219ENST00000579081 TSPY26PQ9H489 355 aa6.01□□□□□ -1.45
NF1-219ENST00000579081 PDCP20941 246 aa6.01□□□□□ -1.45
NF1-219ENST00000579081 RRP1P56182 461 aaKnown RBP6.01□□□□□ -1.45
NF1-219ENST00000579081 COMMD10Q9Y6G5 202 aa6.01□□□□□ -1.45
NF1-219ENST00000579081 HOOK3Q86VS8 718 aa6.01□□□□□ -1.45
NF1-219ENST00000579081 LNPKQ9C0E8 428 aa6.01□□□□□ -1.45
NF1-219ENST00000579081 MAPK8IP2Q13387 824 aaPredicted RBP6□□□□□ -1.45
NF1-219ENST00000579081 ITGB1BP2Q9UKP3 347 aa6□□□□□ -1.45
NF1-219ENST00000579081 ANKRD30BQ9BXX2 1392 aa6□□□□□ -1.45
NF1-219ENST00000579081 SOGA1O94964 1423 aa6□□□□□ -1.45
NF1-219ENST00000579081 CBFA2T2O43439 604 aa6□□□□□ -1.45
NF1-219ENST00000579081 CAMSAP2Q08AD1 1489 aa6□□□□□ -1.45
NF1-219ENST00000579081 TSHZ2Q9NRE2 1034 aa6□□□□□ -1.45
NF1-219ENST00000579081 PABPN1LA6NDY0 278 aaKnown RBP6□□□□□ -1.45
NF1-219ENST00000579081 PPP4R3AQ6IN85 833 aa6□□□□□ -1.45
NF1-219ENST00000579081 PRIMPOLQ96LW4 560 aa6□□□□□ -1.45
NF1-219ENST00000579081 SURF6O75683 361 aaKnown RBP6□□□□□ -1.45
NF1-219ENST00000579081 CHMP4BP1P59074 171 aa6□□□□□ -1.45
NF1-219ENST00000579081 MAP2K1Q02750 393 aaPredicted RBP6□□□□□ -1.45
NF1-219ENST00000579081 C22orf23Q9BZE7 217 aa6□□□□□ -1.45
NF1-219ENST00000579081 GTF3C5Q9Y5Q8 519 aaPredicted RBP6□□□□□ -1.45
NF1-219ENST00000579081 CEBPZQ03701 1054 aaKnown RBP6□□□□□ -1.45
NF1-219ENST00000579081 NUP133Q8WUM0 1156 aa6□□□□□ -1.45
NF1-219ENST00000579081 TMOD2Q9NZR1 351 aa6□□□□□ -1.45
NF1-219ENST00000579081 IVLP07476 585 aa6□□□□□ -1.45
NF1-219ENST00000579081 GNAI3P08754 354 aa6□□□□□ -1.45
NF1-219ENST00000579081 L3MBTL2Q969R5 705 aa6□□□□□ -1.45
NF1-219ENST00000579081 BCCIPQ9P287 314 aaKnown RBP eCLIP6□□□□□ -1.452e-7■■■■■ 30.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms