RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 CRYBG1Q9Y4K1 1723 aa15.7■□□□□ 0.1
ERBB2-208ENST00000578630 MAP3K19Q56UN5 1328 aa15.69■□□□□ 0.1
ERBB2-208ENST00000578630 SPATA31A5Q5VU36 1347 aa15.69■□□□□ 0.1
ERBB2-208ENST00000578630 SPATA31A7Q8IWB4 1347 aa15.69■□□□□ 0.1
ERBB2-208ENST00000578630 PPM1GO15355 546 aaPredicted RBP15.69■□□□□ 0.1
ERBB2-208ENST00000578630 USP35Q9P2H5 1018 aa15.69■□□□□ 0.1
ERBB2-208ENST00000578630 ONECUT3O60422 494 aaPredicted RBP15.68■□□□□ 0.1
ERBB2-208ENST00000578630 HOXC9P31274 260 aa15.68■□□□□ 0.1
ERBB2-208ENST00000578630 DDX10Q13206 875 aaKnown RBP15.68■□□□□ 0.1
ERBB2-208ENST00000578630 CC2D1BQ5T0F9 858 aaKnown RBP15.68■□□□□ 0.1
ERBB2-208ENST00000578630 THRAP3Q9Y2W1 955 aaKnown RBP15.68■□□□□ 0.1
ERBB2-208ENST00000578630 NFAT5O94916 1531 aa15.68■□□□□ 0.1
ERBB2-208ENST00000578630 SPATA31A1Q5TZJ5 1347 aa15.68■□□□□ 0.1
ERBB2-208ENST00000578630 WDR17Q8IZU2 1322 aa15.68■□□□□ 0.1
ERBB2-208ENST00000578630 CAMTA1Q9Y6Y1 1673 aa15.67■□□□□ 0.1
ERBB2-208ENST00000578630 ZNF316A6NFI3 1004 aaPredicted RBP15.67■□□□□ 0.1
ERBB2-208ENST00000578630 TCP11L2Q8N4U5 519 aa15.67■□□□□ 0.1
ERBB2-208ENST00000578630 ANKRD24Q8TF21 1146 aa15.67■□□□□ 0.1
ERBB2-208ENST00000578630 NWD2Q9ULI1 1742 aa15.67■□□□□ 0.1
ERBB2-208ENST00000578630 KIF24Q5T7B8 1368 aa15.66■□□□□ 0.1
ERBB2-208ENST00000578630 NPC1L1Q9UHC9 1359 aa15.66■□□□□ 0.1
ERBB2-208ENST00000578630 A0A0G2JS52 829 aa15.66■□□□□ 0.1
ERBB2-208ENST00000578630 MYT1Q01538 1121 aa15.66■□□□□ 0.1
ERBB2-208ENST00000578630 CNGB1Q14028 1251 aaPredicted RBP15.66■□□□□ 0.1
ERBB2-208ENST00000578630 FAM98CQ17RN3 349 aaKnown RBP15.66■□□□□ 0.1
ERBB2-208ENST00000578630 LTV1Q96GA3 475 aaPredicted RBP15.66■□□□□ 0.1
ERBB2-208ENST00000578630 NLRP2Q9NX02 1062 aa15.66■□□□□ 0.1
ERBB2-208ENST00000578630 POLKQ9UBT6 870 aa15.66■□□□□ 0.1
ERBB2-208ENST00000578630 USP54Q70EL1 1684 aa15.66■□□□□ 0.1
ERBB2-208ENST00000578630 BARGINQ6ZT62 677 aa15.65■□□□□ 0.1
ERBB2-208ENST00000578630 CARD10Q9BWT7 1032 aa15.65■□□□□ 0.1
ERBB2-208ENST00000578630 EMILIN1Q9Y6C2 1016 aa15.65■□□□□ 0.1
ERBB2-208ENST00000578630 COL5A2P05997 1499 aaPredicted RBP15.65■□□□□ 0.1
ERBB2-208ENST00000578630 BLMP54132 1417 aaPredicted RBP15.64■□□□□ 0.09
ERBB2-208ENST00000578630 HSP90AB2PQ58FF8 381 aa15.64■□□□□ 0.09
ERBB2-208ENST00000578630 SEPT12Q8IYM1 358 aa15.64■□□□□ 0.09
ERBB2-208ENST00000578630 ERBB3P21860 1342 aa15.64■□□□□ 0.09
ERBB2-208ENST00000578630 PLCH1Q4KWH8 1693 aa15.63■□□□□ 0.09
ERBB2-208ENST00000578630 RTL1A6NKG5 1358 aa15.63■□□□□ 0.09
ERBB2-208ENST00000578630 CRB1P82279 1406 aa15.63■□□□□ 0.09
ERBB2-208ENST00000578630 CDCA7Q9BWT1 371 aaPredicted RBP15.63■□□□□ 0.09
ERBB2-208ENST00000578630 CDK12Q9NYV4 1490 aaPredicted RBP15.63■□□□□ 0.09
ERBB2-208ENST00000578630 KIF20BQ96Q89 1820 aa15.63■□□□□ 0.09
ERBB2-208ENST00000578630 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.63■□□□□ 0.09
ERBB2-208ENST00000578630 FLT4P35916 1363 aa15.62■□□□□ 0.09
ERBB2-208ENST00000578630 ABCC6O95255 1503 aa15.62■□□□□ 0.09
ERBB2-208ENST00000578630 INSRP06213 1382 aa15.61■□□□□ 0.09
ERBB2-208ENST00000578630 LMO7Q8WWI1 1683 aa15.6■□□□□ 0.09
ERBB2-208ENST00000578630 COL18A1P39060 1754 aa15.6■□□□□ 0.09
ERBB2-208ENST00000578630 MTHFSP49914 203 aa15.6■□□□□ 0.09
ERBB2-208ENST00000578630 SMG6Q86US8 1419 aaKnown RBP15.6■□□□□ 0.09
ERBB2-208ENST00000578630 PDE3BQ13370 1112 aa15.59■□□□□ 0.09
ERBB2-208ENST00000578630 NRAPQ86VF7 1730 aa15.59■□□□□ 0.09
ERBB2-208ENST00000578630 EXOC5O00471 708 aa15.58■□□□□ 0.08
ERBB2-208ENST00000578630 KRT27Q7Z3Y8 459 aa15.58■□□□□ 0.08
ERBB2-208ENST00000578630 IL2RBP14784 551 aa15.57■□□□□ 0.08
ERBB2-208ENST00000578630 DDB1Q16531 1140 aa15.57■□□□□ 0.08
ERBB2-208ENST00000578630 NBPF6Q5VWK0 638 aa15.57■□□□□ 0.08
ERBB2-208ENST00000578630 NBPF4Q96M43 638 aa15.57■□□□□ 0.08
ERBB2-208ENST00000578630 RGS12O14924 1447 aa15.57■□□□□ 0.08
ERBB2-208ENST00000578630 GLI3P10071 1580 aa15.57■□□□□ 0.08
ERBB2-208ENST00000578630 LTN1O94822 1766 aa15.57■□□□□ 0.08
ERBB2-208ENST00000578630 SOCS7O14512 581 aa15.56■□□□□ 0.08
ERBB2-208ENST00000578630 MAP2P11137 1827 aaKnown RBP15.55■□□□□ 0.08
ERBB2-208ENST00000578630 RALBP1Q15311 655 aa15.55■□□□□ 0.08
ERBB2-208ENST00000578630 EIF4A2Q14240 407 aaKnown RBP15.54■□□□□ 0.08
ERBB2-208ENST00000578630 RAPGEF4Q8WZA2 1011 aa15.54■□□□□ 0.08
ERBB2-208ENST00000578630 CFAP53Q96M91 514 aa15.54■□□□□ 0.08
ERBB2-208ENST00000578630 RGPD5Q99666 1765 aa15.54■□□□□ 0.08
ERBB2-208ENST00000578630 ANKRD26Q9UPS8 1709 aa15.54■□□□□ 0.08
ERBB2-208ENST00000578630 PPP2R1AP30153 589 aa15.53■□□□□ 0.08
ERBB2-208ENST00000578630 EYA1Q99502 592 aa15.53■□□□□ 0.08
ERBB2-208ENST00000578630 DIAPH1O60610 1272 aaKnown RBP15.52■□□□□ 0.08
ERBB2-208ENST00000578630 TATP17735 454 aaPredicted RBP15.52■□□□□ 0.08
ERBB2-208ENST00000578630 FAM196AQ6ZSG2 479 aa15.51■□□□□ 0.07
ERBB2-208ENST00000578630 USHBP1Q8N6Y0 703 aa15.51■□□□□ 0.07
ERBB2-208ENST00000578630 IL13P35225 146 aa15.5■□□□□ 0.07
ERBB2-208ENST00000578630 CCDC125Q86Z20 511 aa15.5■□□□□ 0.07
ERBB2-208ENST00000578630 NUDCQ9Y266 331 aa15.5■□□□□ 0.07
ERBB2-208ENST00000578630 ZCRB1Q8TBF4 217 aaKnown RBP15.49■□□□□ 0.07
ERBB2-208ENST00000578630 SF3B2Q13435 895 aaKnown RBP15.48■□□□□ 0.07
ERBB2-208ENST00000578630 UPF1Q92900 1129 aaKnown RBP eCLIP15.48■□□□□ 0.07
ERBB2-208ENST00000578630 PEAK1Q9H792 1746 aa15.48■□□□□ 0.07
ERBB2-208ENST00000578630 PARD3Q8TEW0 1356 aa15.48■□□□□ 0.07
ERBB2-208ENST00000578630 FAM182BQ5T319 152 aa15.47■□□□□ 0.07
ERBB2-208ENST00000578630 DDX54Q8TDD1 881 aaKnown RBP15.47■□□□□ 0.07
ERBB2-208ENST00000578630 IGSF1Q8N6C5 1336 aa15.46■□□□□ 0.07
ERBB2-208ENST00000578630 DISP2A7MBM2 1401 aa15.46■□□□□ 0.07
ERBB2-208ENST00000578630 SULT6B1Q6IMI4 303 aa15.46■□□□□ 0.07
ERBB2-208ENST00000578630 MARCH10Q8NA82 808 aaPredicted RBP15.46■□□□□ 0.07
ERBB2-208ENST00000578630 SPG7Q9UQ90 795 aa15.46■□□□□ 0.07
ERBB2-208ENST00000578630 U2SURPO15042 1029 aaKnown RBP15.45■□□□□ 0.06
ERBB2-208ENST00000578630 PRKRIP1Q9H875 184 aaPredicted RBP15.45■□□□□ 0.06
ERBB2-208ENST00000578630 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.45■□□□□ 0.06
ERBB2-208ENST00000578630 FAM208AQ9UK61 1670 aaKnown RBP15.44■□□□□ 0.06
ERBB2-208ENST00000578630 THSD7AQ9UPZ6 1657 aa15.44■□□□□ 0.06
ERBB2-208ENST00000578630 PLEKHO1Q53GL0 409 aaPredicted RBP15.44■□□□□ 0.06
ERBB2-208ENST00000578630 MYBBP1AQ9BQG0 1328 aaKnown RBP15.43■□□□□ 0.06
ERBB2-208ENST00000578630 ANP32CO43423 234 aa15.43■□□□□ 0.06
ERBB2-208ENST00000578630 AMOTQ4VCS5 1084 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms