RNA–Protein interactions for RNA: ENST00000574412.5

CXCL16-203, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-203ENST00000574412 INSRP06213 1382 aa28.3■■■□□ 2.12
CXCL16-203ENST00000574412 U2SURPO15042 1029 aaKnown RBP28.3■■■□□ 2.12
CXCL16-203ENST00000574412 ADAMTS8Q9UP79 889 aa28.29■■■□□ 2.12
CXCL16-203ENST00000574412 RTL1A6NKG5 1358 aa28.29■■■□□ 2.12
CXCL16-203ENST00000574412 LTV1Q96GA3 475 aaPredicted RBP28.29■■■□□ 2.12
CXCL16-203ENST00000574412 EIF4A2Q14240 407 aaKnown RBP28.28■■■□□ 2.12
CXCL16-203ENST00000574412 IP6K1Q92551 441 aa28.28■■■□□ 2.12
CXCL16-203ENST00000574412 KIF24Q5T7B8 1368 aa28.28■■■□□ 2.12
CXCL16-203ENST00000574412 COL18A1P39060 1754 aa28.27■■■□□ 2.12
CXCL16-203ENST00000574412 IL13P35225 146 aa28.26■■■□□ 2.12
CXCL16-203ENST00000574412 SENP3-EIF4A1A0A087X0R7 540 aa28.26■■■□□ 2.11
CXCL16-203ENST00000574412 NUTM2BA6NNL0 878 aaPredicted RBP28.26■■■□□ 2.11
CXCL16-203ENST00000574412 NUTM2EB1AL46 878 aaPredicted RBP28.26■■■□□ 2.11
CXCL16-203ENST00000574412 U2AF1L5P0DN76 240 aaPredicted RBP28.26■■■□□ 2.11
CXCL16-203ENST00000574412 U2AF1Q01081 240 aaKnown RBP eCLIP28.26■■■□□ 2.11
CXCL16-203ENST00000574412 NUTM2AQ8IVF1 878 aaPredicted RBP28.26■■■□□ 2.11
CXCL16-203ENST00000574412 PRDM11Q9NQV5 511 aa28.26■■■□□ 2.11
CXCL16-203ENST00000574412 NUDCQ9Y266 331 aa28.26■■■□□ 2.11
CXCL16-203ENST00000574412 AXIN2Q9Y2T1 843 aa28.26■■■□□ 2.11
CXCL16-203ENST00000574412 CPDO75976 1380 aa28.25■■■□□ 2.11
CXCL16-203ENST00000574412 JCADQ9P266 1359 aa28.24■■■□□ 2.11
CXCL16-203ENST00000574412 HNRNPUQ00839 825 aaKnown RBP eCLIP28.23■■■□□ 2.11
CXCL16-203ENST00000574412 RGPD2P0DJD1 1756 aa28.22■■■□□ 2.11
CXCL16-203ENST00000574412 ADAMTS2O95450 1211 aa28.21■■■□□ 2.11
CXCL16-203ENST00000574412 CCDC146Q8IYE0 955 aa28.2■■■□□ 2.11
CXCL16-203ENST00000574412 BLMP54132 1417 aaPredicted RBP28.2■■■□□ 2.1
CXCL16-203ENST00000574412 RGPD1P0DJD0 1748 aa28.19■■■□□ 2.1
CXCL16-203ENST00000574412 HMOX1P09601 288 aa28.19■■■□□ 2.1
CXCL16-203ENST00000574412 LMO7Q8WWI1 1683 aa28.18■■■□□ 2.1
CXCL16-203ENST00000574412 FAM83GA6ND36 823 aa28.18■■■□□ 2.1
CXCL16-203ENST00000574412 ANKRD24Q8TF21 1146 aa28.18■■■□□ 2.1
CXCL16-203ENST00000574412 CAMTA1Q9Y6Y1 1673 aa28.17■■■□□ 2.1
CXCL16-203ENST00000574412 ABCC6O95255 1503 aa28.15■■■□□ 2.1
CXCL16-203ENST00000574412 EYA1Q99502 592 aa28.15■■■□□ 2.1
CXCL16-203ENST00000574412 COL14A1Q05707 1796 aaKnown RBP28.14■■■□□ 2.1
CXCL16-203ENST00000574412 AEBP1Q8IUX7 1158 aa28.14■■■□□ 2.1
CXCL16-203ENST00000574412 ERBB3P21860 1342 aa28.13■■■□□ 2.09
CXCL16-203ENST00000574412 USHBP1Q8N6Y0 703 aa28.13■■■□□ 2.09
CXCL16-203ENST00000574412 SULT6B1Q6IMI4 303 aa28.13■■■□□ 2.09
CXCL16-203ENST00000574412 PLCH1Q4KWH8 1693 aa28.12■■■□□ 2.09
CXCL16-203ENST00000574412 CSB-PGBD3P0DP91 1061 aa28.11■■■□□ 2.09
CXCL16-203ENST00000574412 NBPF6Q5VWK0 638 aa28.1■■■□□ 2.09
CXCL16-203ENST00000574412 NBPF4Q96M43 638 aa28.1■■■□□ 2.09
CXCL16-203ENST00000574412 LRP6O75581 1613 aa28.1■■■□□ 2.09
CXCL16-203ENST00000574412 IGSF1Q8N6C5 1336 aa28.1■■■□□ 2.09
CXCL16-203ENST00000574412 RSPH6AQ9H0K4 717 aa28.1■■■□□ 2.09
CXCL16-203ENST00000574412 COL5A2P05997 1499 aaPredicted RBP28.09■■■□□ 2.09
CXCL16-203ENST00000574412 PRKAR2BP31323 418 aa28.09■■■□□ 2.09
CXCL16-203ENST00000574412 STRN4Q9NRL3 753 aa28.09■■■□□ 2.09
CXCL16-203ENST00000574412 BTG4Q9NY30 223 aa28.09■■■□□ 2.09
CXCL16-203ENST00000574412 SPATA31A6Q5VVP1 1343 aa28.08■■■□□ 2.09
CXCL16-203ENST00000574412 SALL2Q9Y467 1007 aaPredicted RBP28.08■■■□□ 2.09
CXCL16-203ENST00000574412 FAM208AQ9UK61 1670 aaKnown RBP28.07■■■□□ 2.08
CXCL16-203ENST00000574412 FCHSD2O94868 740 aa28.07■■■□□ 2.08
CXCL16-203ENST00000574412 NLRP2Q9NX02 1062 aa28.07■■■□□ 2.08
CXCL16-203ENST00000574412 RUNDC1Q96C34 613 aa28.06■■■□□ 2.08
CXCL16-203ENST00000574412 ZBED9Q6R2W3 1325 aa28.05■■■□□ 2.08
CXCL16-203ENST00000574412 APAF1O14727 1248 aa28.05■■■□□ 2.08
CXCL16-203ENST00000574412 EVA1CP58658 441 aa28.05■■■□□ 2.08
CXCL16-203ENST00000574412 PLEKHF1Q96S99 279 aa28.05■■■□□ 2.08
CXCL16-203ENST00000574412 FBXO41Q8TF61 875 aa28.04■■■□□ 2.08
CXCL16-203ENST00000574412 C8orf37Q96NL8 207 aa28.03■■■□□ 2.08
CXCL16-203ENST00000574412 WDR17Q8IZU2 1322 aa28.02■■■□□ 2.08
CXCL16-203ENST00000574412 MAPK8IP3Q9UPT6 1336 aa28.02■■■□□ 2.08
CXCL16-203ENST00000574412 KDRP35968 1356 aa28.02■■■□□ 2.08
CXCL16-203ENST00000574412 PHACTR3Q96KR7 559 aa28.02■■■□□ 2.08
CXCL16-203ENST00000574412 RRP7AQ9Y3A4 280 aaKnown RBP28.02■■■□□ 2.08
CXCL16-203ENST00000574412 LARP1Q6PKG0 1096 aaKnown RBP28.01■■■□□ 2.07
CXCL16-203ENST00000574412 NRAPQ86VF7 1730 aa28.01■■■□□ 2.07
CXCL16-203ENST00000574412 TOM1L2Q6ZVM7 507 aa28■■■□□ 2.07
CXCL16-203ENST00000574412 TCP11L2Q8N4U5 519 aa28■■■□□ 2.07
CXCL16-203ENST00000574412 PNNQ9H307 717 aaKnown RBP28■■■□□ 2.07
CXCL16-203ENST00000574412 NEUROD2Q15784 382 aa28■■■□□ 2.07
CXCL16-203ENST00000574412 MEX3CQ5U5Q3 659 aaKnown RBP28■■■□□ 2.07
CXCL16-203ENST00000574412 NWD2Q9ULI1 1742 aa27.99■■■□□ 2.07
CXCL16-203ENST00000574412 NGLY1Q96IV0 654 aa27.99■■■□□ 2.07
CXCL16-203ENST00000574412 NEFMP07197 916 aa27.97■■■□□ 2.07
CXCL16-203ENST00000574412 NCAPD2Q15021 1401 aa27.97■■■□□ 2.07
CXCL16-203ENST00000574412 USP35Q9P2H5 1018 aa27.96■■■□□ 2.07
CXCL16-203ENST00000574412 SLIT2O94813 1529 aa27.96■■■□□ 2.07
CXCL16-203ENST00000574412 DLG5Q8TDM6 1919 aa27.95■■■□□ 2.06
CXCL16-203ENST00000574412 CRB1P82279 1406 aa27.93■■■□□ 2.06
CXCL16-203ENST00000574412 TMPOP42166 694 aaKnown RBP27.92■■■□□ 2.06
CXCL16-203ENST00000574412 CARD10Q9BWT7 1032 aa27.91■■■□□ 2.06
CXCL16-203ENST00000574412 MEGF6O75095 1541 aa27.9■■■□□ 2.06
CXCL16-203ENST00000574412 RAPGEF4Q8WZA2 1011 aa27.89■■■□□ 2.06
CXCL16-203ENST00000574412 RIPK4P57078 832 aa27.88■■■□□ 2.05
CXCL16-203ENST00000574412 NFE2L2Q16236 605 aa27.88■■■□□ 2.05
CXCL16-203ENST00000574412 MTHFSDQ2M296 383 aaKnown RBP27.88■■■□□ 2.05
CXCL16-203ENST00000574412 BCL9LQ86UU0 1499 aa27.88■■■□□ 2.05
CXCL16-203ENST00000574412 CCDC9Q9Y3X0 531 aaKnown RBP27.87■■■□□ 2.05
CXCL16-203ENST00000574412 UNC5CLQ8IV45 518 aa27.87■■■□□ 2.05
CXCL16-203ENST00000574412 FNBP4Q8N3X1 1017 aaPredicted RBP27.87■■■□□ 2.05
CXCL16-203ENST00000574412 AFF2P51816 1311 aa27.86■■■□□ 2.05
CXCL16-203ENST00000574412 TATP17735 454 aaPredicted RBP27.85■■■□□ 2.05
CXCL16-203ENST00000574412 USP21Q9UK80 565 aa27.85■■■□□ 2.05
CXCL16-203ENST00000574412 PARP4Q9UKK3 1724 aaKnown RBP27.85■■■□□ 2.05
CXCL16-203ENST00000574412 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.83■■■□□ 2.05
CXCL16-203ENST00000574412 WNK3Q9BYP7 1800 aa27.82■■■□□ 2.04
CXCL16-203ENST00000574412 TRIM35Q9UPQ4 493 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms