RNA–Protein interactions for RNA: ENST00000573842.1

HCFC1R1-205, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-205ENST00000573842 SOX12O15370 315 aa29.94■■■□□ 2.38
HCFC1R1-205ENST00000573842 TMF1P82094 1093 aa29.93■■■□□ 2.38
HCFC1R1-205ENST00000573842 BARGINQ6ZT62 677 aa29.93■■■□□ 2.38
HCFC1R1-205ENST00000573842 CCER1Q8TC90 406 aaPredicted RBP29.93■■■□□ 2.38
HCFC1R1-205ENST00000573842 TCP11L2Q8N4U5 519 aa29.92■■■□□ 2.38
HCFC1R1-205ENST00000573842 TNS1Q9HBL0 1735 aaKnown RBP29.91■■■□□ 2.38
HCFC1R1-205ENST00000573842 THRAP3Q9Y2W1 955 aaKnown RBP29.91■■■□□ 2.38
HCFC1R1-205ENST00000573842 ARHGEF25Q86VW2 580 aa29.9■■■□□ 2.38
HCFC1R1-205ENST00000573842 NME9Q86XW9 330 aa29.9■■■□□ 2.38
HCFC1R1-205ENST00000573842 LRRC37A3O60309 1634 aa29.89■■■□□ 2.37
HCFC1R1-205ENST00000573842 MYOM1P52179 1685 aa29.88■■■□□ 2.37
HCFC1R1-205ENST00000573842 OVOS2A0A0J9YW53 1432 aa29.88■■■□□ 2.37
HCFC1R1-205ENST00000573842 OVOS2Q6IE36 1432 aa29.88■■■□□ 2.37
HCFC1R1-205ENST00000573842 ANKRD36BQ8N2N9 1353 aa29.87■■■□□ 2.37
HCFC1R1-205ENST00000573842 ZRANB1Q9UGI0 708 aa29.86■■■□□ 2.37
HCFC1R1-205ENST00000573842 WDR17Q8IZU2 1322 aa29.86■■■□□ 2.37
HCFC1R1-205ENST00000573842 KIF20BQ96Q89 1820 aa29.85■■■□□ 2.37
HCFC1R1-205ENST00000573842 CDCA8Q53HL2 280 aa29.85■■■□□ 2.37
HCFC1R1-205ENST00000573842 TOM1L2Q6ZVM7 507 aa29.85■■■□□ 2.37
HCFC1R1-205ENST00000573842 FAM182BQ5T319 152 aa29.84■■■□□ 2.37
HCFC1R1-205ENST00000573842 AXIN2Q9Y2T1 843 aa29.83■■■□□ 2.37
HCFC1R1-205ENST00000573842 PDE3BQ13370 1112 aa29.82■■■□□ 2.36
HCFC1R1-205ENST00000573842 DEFB132Q7Z7B7 95 aa29.81■■■□□ 2.36
HCFC1R1-205ENST00000573842 CSB-PGBD3P0DP91 1061 aa29.8■■■□□ 2.36
HCFC1R1-205ENST00000573842 BAG6P46379 1132 aa29.8■■■□□ 2.36
HCFC1R1-205ENST00000573842 FAM208AQ9UK61 1670 aaKnown RBP29.79■■■□□ 2.36
HCFC1R1-205ENST00000573842 FAM196AQ6ZSG2 479 aa29.79■■■□□ 2.36
HCFC1R1-205ENST00000573842 DISP2A7MBM2 1401 aa29.76■■■□□ 2.35
HCFC1R1-205ENST00000573842 PEAK1Q9H792 1746 aa29.76■■■□□ 2.35
HCFC1R1-205ENST00000573842 COG3Q96JB2 828 aa29.74■■■□□ 2.35
HCFC1R1-205ENST00000573842 CCDC7Q96M83 1385 aa29.74■■■□□ 2.35
HCFC1R1-205ENST00000573842 SBF2Q86WG5 1849 aa29.73■■■□□ 2.35
HCFC1R1-205ENST00000573842 CDCA7Q9BWT1 371 aaPredicted RBP29.73■■■□□ 2.35
HCFC1R1-205ENST00000573842 CARD10Q9BWT7 1032 aa29.73■■■□□ 2.35
HCFC1R1-205ENST00000573842 OVOS2A0A0G2JMS6 1433 aa29.72■■■□□ 2.35
HCFC1R1-205ENST00000573842 ERBB3P21860 1342 aa29.71■■■□□ 2.35
HCFC1R1-205ENST00000573842 DDB1Q16531 1140 aa29.7■■■□□ 2.35
HCFC1R1-205ENST00000573842 C11orf95C9JLR9 678 aaPredicted RBP29.69■■■□□ 2.34
HCFC1R1-205ENST00000573842 TRIM37O94972 964 aa29.69■■■□□ 2.34
HCFC1R1-205ENST00000573842 RREB1Q92766 1687 aa29.67■■■□□ 2.34
HCFC1R1-205ENST00000573842 TNS2Q63HR2 1409 aa29.65■■■□□ 2.34
HCFC1R1-205ENST00000573842 EIF4G2P78344 907 aaKnown RBP eCLIP29.65■■■□□ 2.34
HCFC1R1-205ENST00000573842 EN1Q05925 392 aaPredicted RBP29.65■■■□□ 2.34
HCFC1R1-205ENST00000573842 ANKRD24Q8TF21 1146 aa29.65■■■□□ 2.34
HCFC1R1-205ENST00000573842 RGPD3A6NKT7 1758 aaPredicted RBP29.64■■■□□ 2.34
HCFC1R1-205ENST00000573842 RGPD4Q7Z3J3 1758 aa29.64■■■□□ 2.34
HCFC1R1-205ENST00000573842 NSD3Q9BZ95 1437 aa29.63■■■□□ 2.33
HCFC1R1-205ENST00000573842 NLRP2Q9NX02 1062 aa29.63■■■□□ 2.33
HCFC1R1-205ENST00000573842 PARD3Q8TEW0 1356 aa29.63■■■□□ 2.33
HCFC1R1-205ENST00000573842 RTL1A6NKG5 1358 aa29.62■■■□□ 2.33
HCFC1R1-205ENST00000573842 FYB1O15117 783 aa29.61■■■□□ 2.33
HCFC1R1-205ENST00000573842 IP6K1Q92551 441 aa29.61■■■□□ 2.33
HCFC1R1-205ENST00000573842 GGNBP2Q9H3C7 697 aa29.61■■■□□ 2.33
HCFC1R1-205ENST00000573842 NUP188Q5SRE5 1749 aa29.61■■■□□ 2.33
HCFC1R1-205ENST00000573842 MAP3K19Q56UN5 1328 aa29.61■■■□□ 2.33
HCFC1R1-205ENST00000573842 RGPD2P0DJD1 1756 aa29.61■■■□□ 2.33
HCFC1R1-205ENST00000573842 APBA3O96018 575 aa29.6■■■□□ 2.33
HCFC1R1-205ENST00000573842 ANKRD26Q9UPS8 1709 aa29.59■■■□□ 2.33
HCFC1R1-205ENST00000573842 HSPA5P11021 654 aaKnown RBP29.58■■■□□ 2.33
HCFC1R1-205ENST00000573842 AMPHP49418 695 aa29.58■■■□□ 2.33
HCFC1R1-205ENST00000573842 BCL9O00512 1426 aa29.57■■■□□ 2.32
HCFC1R1-205ENST00000573842 POLR3GLQ9BT43 218 aa29.57■■■□□ 2.32
HCFC1R1-205ENST00000573842 EXOC5O00471 708 aa29.56■■■□□ 2.32
HCFC1R1-205ENST00000573842 HOXC9P31274 260 aa29.56■■■□□ 2.32
HCFC1R1-205ENST00000573842 EZH2Q15910 746 aaKnown RBP29.56■■■□□ 2.32
HCFC1R1-205ENST00000573842 SRCAPQ6ZRS2 3230 aa29.54■■■□□ 2.32
HCFC1R1-205ENST00000573842 NHSQ6T4R5 1651 aa29.54■■■□□ 2.32
HCFC1R1-205ENST00000573842 IL2RBP14784 551 aa29.54■■■□□ 2.32
HCFC1R1-205ENST00000573842 MARCH10Q8NA82 808 aaPredicted RBP29.54■■■□□ 2.32
HCFC1R1-205ENST00000573842 LTV1Q96GA3 475 aaPredicted RBP29.54■■■□□ 2.32
HCFC1R1-205ENST00000573842 CAMKK2Q96RR4 588 aa29.54■■■□□ 2.32
HCFC1R1-205ENST00000573842 CARD14Q9BXL6 1004 aa29.54■■■□□ 2.32
HCFC1R1-205ENST00000573842 SMG6Q86US8 1419 aaKnown RBP29.54■■■□□ 2.32
HCFC1R1-205ENST00000573842 FBLN1P23142 703 aa29.52■■■□□ 2.32
HCFC1R1-205ENST00000573842 RRS1Q15050 365 aaKnown RBP29.52■■■□□ 2.32
HCFC1R1-205ENST00000573842 LRP5O75197 1615 aa29.51■■■□□ 2.31
HCFC1R1-205ENST00000573842 CGNL1Q0VF96 1302 aa29.5■■■□□ 2.31
HCFC1R1-205ENST00000573842 MAP2P11137 1827 aaKnown RBP29.5■■■□□ 2.31
HCFC1R1-205ENST00000573842 KIF24Q5T7B8 1368 aa29.49■■■□□ 2.31
HCFC1R1-205ENST00000573842 FLT4P35916 1363 aa29.48■■■□□ 2.31
HCFC1R1-205ENST00000573842 PSDA5PKW4 1024 aaPredicted RBP29.47■■■□□ 2.31
HCFC1R1-205ENST00000573842 BCL11BQ9C0K0 894 aaPredicted RBP29.47■■■□□ 2.31
HCFC1R1-205ENST00000573842 KAT6BQ8WYB5 2073 aa29.46■■■□□ 2.31
HCFC1R1-205ENST00000573842 SHANK3Q9BYB0 1731 aa29.46■■■□□ 2.31
HCFC1R1-205ENST00000573842 INSRP06213 1382 aa29.44■■■□□ 2.3
HCFC1R1-205ENST00000573842 BTAF1O14981 1849 aa29.43■■■□□ 2.3
HCFC1R1-205ENST00000573842 R3HDM1Q15032 1099 aaKnown RBP29.42■■■□□ 2.3
HCFC1R1-205ENST00000573842 DOT1LQ8TEK3 1739 aa29.4■■■□□ 2.3
HCFC1R1-205ENST00000573842 PLSCR1O15162 318 aa29.4■■■□□ 2.3
HCFC1R1-205ENST00000573842 MEGF6O75095 1541 aa29.4■■■□□ 2.3
HCFC1R1-205ENST00000573842 NBPF14Q5TI25 921 aa29.38■■■□□ 2.29
HCFC1R1-205ENST00000573842 HSP90AB2PQ58FF8 381 aa29.37■■■□□ 2.29
HCFC1R1-205ENST00000573842 PTF1AQ7RTS3 328 aa29.37■■■□□ 2.29
HCFC1R1-205ENST00000573842 EMILIN1Q9Y6C2 1016 aa29.36■■■□□ 2.29
HCFC1R1-205ENST00000573842 NSD2O96028 1365 aa29.36■■■□□ 2.29
HCFC1R1-205ENST00000573842 PANK3Q9H999 370 aa29.35■■■□□ 2.29
HCFC1R1-205ENST00000573842 NBPF6Q5VWK0 638 aa29.34■■■□□ 2.29
HCFC1R1-205ENST00000573842 NBPF4Q96M43 638 aa29.34■■■□□ 2.29
HCFC1R1-205ENST00000573842 ACSBG1Q96GR2 724 aa29.33■■■□□ 2.29
HCFC1R1-205ENST00000573842 PPM1GO15355 546 aaPredicted RBP29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms