RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 RRP1P56182 461 aaKnown RBP22.74■■□□□ 1.23
RPAIN-208ENST00000571043 SLFN5Q08AF3 891 aa22.74■■□□□ 1.23
RPAIN-208ENST00000571043 DUSP27Q5VZP5 1158 aa22.74■■□□□ 1.23
RPAIN-208ENST00000571043 TRMT2AQ8IZ69 625 aaKnown RBP22.74■■□□□ 1.23
RPAIN-208ENST00000571043 FBXO41Q8TF61 875 aa22.74■■□□□ 1.23
RPAIN-208ENST00000571043 COL22A1Q8NFW1 1626 aaPredicted RBP22.74■■□□□ 1.23
RPAIN-208ENST00000571043 COL3A1P02461 1466 aaPredicted RBP22.74■■□□□ 1.23
RPAIN-208ENST00000571043 POLKQ9UBT6 870 aa22.73■■□□□ 1.23
RPAIN-208ENST00000571043 PLEKHG5O94827 1062 aa22.72■■□□□ 1.23
RPAIN-208ENST00000571043 PHRF1Q9P1Y6 1649 aaKnown RBP22.72■■□□□ 1.23
RPAIN-208ENST00000571043 SOX12O15370 315 aa22.72■■□□□ 1.23
RPAIN-208ENST00000571043 NFAT5O94916 1531 aa22.71■■□□□ 1.23
RPAIN-208ENST00000571043 E9PSI1 815 aa22.71■■□□□ 1.23
RPAIN-208ENST00000571043 U2AF1L5P0DN76 240 aaPredicted RBP22.71■■□□□ 1.23
RPAIN-208ENST00000571043 U2AF1Q01081 240 aaKnown RBP eCLIP22.71■■□□□ 1.23
RPAIN-208ENST00000571043 JCADQ9P266 1359 aa22.71■■□□□ 1.23
RPAIN-208ENST00000571043 RRS1Q15050 365 aaKnown RBP22.7■■□□□ 1.22
RPAIN-208ENST00000571043 CCDC27Q2M243 656 aa22.69■■□□□ 1.22
RPAIN-208ENST00000571043 ARHGEF25Q86VW2 580 aa22.69■■□□□ 1.22
RPAIN-208ENST00000571043 TCP11L2Q8N4U5 519 aa22.69■■□□□ 1.22
RPAIN-208ENST00000571043 PHF23Q9BUL5 403 aaPredicted RBP22.69■■□□□ 1.22
RPAIN-208ENST00000571043 ABCA3Q99758 1704 aa22.69■■□□□ 1.22
RPAIN-208ENST00000571043 DIAPH1O60610 1272 aaKnown RBP22.68■■□□□ 1.22
RPAIN-208ENST00000571043 EMILIN1Q9Y6C2 1016 aa22.68■■□□□ 1.22
RPAIN-208ENST00000571043 MAP3K19Q56UN5 1328 aa22.68■■□□□ 1.22
RPAIN-208ENST00000571043 WWC1Q8IX03 1113 aa22.67■■□□□ 1.22
RPAIN-208ENST00000571043 LTN1O94822 1766 aa22.67■■□□□ 1.22
RPAIN-208ENST00000571043 ZC3H6P61129 1189 aaKnown RBP22.67■■□□□ 1.22
RPAIN-208ENST00000571043 PNNQ9H307 717 aaKnown RBP22.66■■□□□ 1.22
RPAIN-208ENST00000571043 CPDO75976 1380 aa22.65■■□□□ 1.22
RPAIN-208ENST00000571043 KIF24Q5T7B8 1368 aa22.65■■□□□ 1.22
RPAIN-208ENST00000571043 HAP1P54257 671 aaPredicted RBP22.65■■□□□ 1.22
RPAIN-208ENST00000571043 PPM1GO15355 546 aaPredicted RBP22.64■■□□□ 1.21
RPAIN-208ENST00000571043 WDR63Q8IWG1 891 aa22.64■■□□□ 1.21
RPAIN-208ENST00000571043 U2SURPO15042 1029 aaKnown RBP22.63■■□□□ 1.21
RPAIN-208ENST00000571043 AMPHP49418 695 aa22.63■■□□□ 1.21
RPAIN-208ENST00000571043 PLEKHF1Q96S99 279 aa22.63■■□□□ 1.21
RPAIN-208ENST00000571043 SPATA31A6Q5VVP1 1343 aa22.62■■□□□ 1.21
RPAIN-208ENST00000571043 PEAK1Q9H792 1746 aa22.62■■□□□ 1.21
RPAIN-208ENST00000571043 IP6K1Q92551 441 aa22.62■■□□□ 1.21
RPAIN-208ENST00000571043 SPINK5Q9NQ38 1064 aaPredicted RBP22.62■■□□□ 1.21
RPAIN-208ENST00000571043 KIAA0232Q92628 1395 aa22.61■■□□□ 1.21
RPAIN-208ENST00000571043 HOXC9P31274 260 aa22.61■■□□□ 1.21
RPAIN-208ENST00000571043 RTL1A6NKG5 1358 aa22.6■■□□□ 1.21
RPAIN-208ENST00000571043 FLT4P35916 1363 aa22.6■■□□□ 1.21
RPAIN-208ENST00000571043 COL18A1P39060 1754 aa22.6■■□□□ 1.21
RPAIN-208ENST00000571043 HSP90AB2PQ58FF8 381 aa22.6■■□□□ 1.21
RPAIN-208ENST00000571043 CDK12Q9NYV4 1490 aaPredicted RBP22.6■■□□□ 1.21
RPAIN-208ENST00000571043 FCHSD2O94868 740 aa22.59■■□□□ 1.21
RPAIN-208ENST00000571043 FAM83GA6ND36 823 aa22.58■■□□□ 1.21
RPAIN-208ENST00000571043 NUTM2BA6NNL0 878 aaPredicted RBP22.58■■□□□ 1.21
RPAIN-208ENST00000571043 NUTM2EB1AL46 878 aaPredicted RBP22.58■■□□□ 1.21
RPAIN-208ENST00000571043 NUTM2AQ8IVF1 878 aaPredicted RBP22.58■■□□□ 1.21
RPAIN-208ENST00000571043 PRDM11Q9NQV5 511 aa22.58■■□□□ 1.21
RPAIN-208ENST00000571043 RRP7AQ9Y3A4 280 aaKnown RBP22.58■■□□□ 1.21
RPAIN-208ENST00000571043 RGPD5Q99666 1765 aa22.57■■□□□ 1.2
RPAIN-208ENST00000571043 ZBTB7CA1YPR0 619 aa22.57■■□□□ 1.2
RPAIN-208ENST00000571043 B4GALNT3Q6L9W6 998 aa22.57■■□□□ 1.2
RPAIN-208ENST00000571043 AXIN2Q9Y2T1 843 aa22.57■■□□□ 1.2
RPAIN-208ENST00000571043 MAPK8IP3Q9UPT6 1336 aa22.57■■□□□ 1.2
RPAIN-208ENST00000571043 NEUROD2Q15784 382 aa22.57■■□□□ 1.2
RPAIN-208ENST00000571043 CHRNA2Q15822 529 aa22.57■■□□□ 1.2
RPAIN-208ENST00000571043 ABCC6O95255 1503 aa22.56■■□□□ 1.2
RPAIN-208ENST00000571043 ADAMTS2O95450 1211 aa22.55■■□□□ 1.2
RPAIN-208ENST00000571043 IL13P35225 146 aa22.55■■□□□ 1.2
RPAIN-208ENST00000571043 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.55■■□□□ 1.2
RPAIN-208ENST00000571043 TMPOP42166 694 aaKnown RBP22.54■■□□□ 1.2
RPAIN-208ENST00000571043 EIF4A2Q14240 407 aaKnown RBP22.52■■□□□ 1.2
RPAIN-208ENST00000571043 CCDC136Q96JN2 1154 aa22.52■■□□□ 1.2
RPAIN-208ENST00000571043 RSPH6AQ9H0K4 717 aa22.52■■□□□ 1.2
RPAIN-208ENST00000571043 LMO7Q8WWI1 1683 aa22.52■■□□□ 1.2
RPAIN-208ENST00000571043 COL14A1Q05707 1796 aaKnown RBP22.52■■□□□ 1.2
RPAIN-208ENST00000571043 EXOC6Q8TAG9 804 aa22.52■■□□□ 1.19
RPAIN-208ENST00000571043 CAMTA1Q9Y6Y1 1673 aa22.51■■□□□ 1.19
RPAIN-208ENST00000571043 MYH16Q9H6N6 1097 aa22.51■■□□□ 1.19
RPAIN-208ENST00000571043 TSHZ2Q9NRE2 1034 aa22.51■■□□□ 1.19
RPAIN-208ENST00000571043 LRP6O75581 1613 aa22.5■■□□□ 1.19
RPAIN-208ENST00000571043 NEFMP07197 916 aa22.5■■□□□ 1.19
RPAIN-208ENST00000571043 IL16Q14005 1332 aa22.49■■□□□ 1.19
RPAIN-208ENST00000571043 PLIN1O60240 522 aa22.49■■□□□ 1.19
RPAIN-208ENST00000571043 ANKRD24Q8TF21 1146 aa22.49■■□□□ 1.19
RPAIN-208ENST00000571043 TRIM35Q9UPQ4 493 aa22.48■■□□□ 1.19
RPAIN-208ENST00000571043 ERBB3P21860 1342 aa22.48■■□□□ 1.19
RPAIN-208ENST00000571043 PRKAR2BP31323 418 aa22.47■■□□□ 1.19
RPAIN-208ENST00000571043 LTV1Q96GA3 475 aaPredicted RBP22.47■■□□□ 1.19
RPAIN-208ENST00000571043 BTG4Q9NY30 223 aa22.47■■□□□ 1.19
RPAIN-208ENST00000571043 RIPK4P57078 832 aa22.46■■□□□ 1.19
RPAIN-208ENST00000571043 FNBP4Q8N3X1 1017 aaPredicted RBP22.45■■□□□ 1.18
RPAIN-208ENST00000571043 NGLY1Q96IV0 654 aa22.45■■□□□ 1.18
RPAIN-208ENST00000571043 EYA1Q99502 592 aa22.45■■□□□ 1.18
RPAIN-208ENST00000571043 COL5A2P05997 1499 aaPredicted RBP22.45■■□□□ 1.18
RPAIN-208ENST00000571043 SLIT2O94813 1529 aa22.45■■□□□ 1.18
RPAIN-208ENST00000571043 RGPD2P0DJD1 1756 aa22.44■■□□□ 1.18
RPAIN-208ENST00000571043 EVA1CP58658 441 aa22.44■■□□□ 1.18
RPAIN-208ENST00000571043 C8orf37Q96NL8 207 aa22.44■■□□□ 1.18
RPAIN-208ENST00000571043 CRBNQ96SW2 442 aa22.44■■□□□ 1.18
RPAIN-208ENST00000571043 PLCH1Q4KWH8 1693 aa22.44■■□□□ 1.18
RPAIN-208ENST00000571043 NWD2Q9ULI1 1742 aa22.44■■□□□ 1.18
RPAIN-208ENST00000571043 RGPD1P0DJD0 1748 aa22.43■■□□□ 1.18
RPAIN-208ENST00000571043 CT47B1P0C2W7 299 aaPredicted RBP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms