RNA–Protein interactions for RNA: ENST00000570616.1

SLC12A4-205, Transcript of solute carrier family 12 member 4, humanhuman

TSL 3

Gene SLC12A4, Length 406 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-205ENST00000570616 SPATA31A1Q5TZJ5 1347 aa31.53■■■□□ 2.64
SLC12A4-205ENST00000570616 LARP1Q6PKG0 1096 aaKnown RBP31.52■■■□□ 2.64
SLC12A4-205ENST00000570616 AXIN2Q9Y2T1 843 aa31.52■■■□□ 2.64
SLC12A4-205ENST00000570616 CGNL1Q0VF96 1302 aa31.51■■■□□ 2.64
SLC12A4-205ENST00000570616 KIF20BQ96Q89 1820 aa31.5■■■□□ 2.63
SLC12A4-205ENST00000570616 PANK3Q9H999 370 aa31.5■■■□□ 2.63
SLC12A4-205ENST00000570616 FAM98CQ17RN3 349 aaKnown RBP31.49■■■□□ 2.63
SLC12A4-205ENST00000570616 SEPT12Q8IYM1 358 aa31.49■■■□□ 2.63
SLC12A4-205ENST00000570616 CRB1P82279 1406 aa31.48■■■□□ 2.63
SLC12A4-205ENST00000570616 WDR17Q8IZU2 1322 aa31.47■■■□□ 2.63
SLC12A4-205ENST00000570616 CCDC7Q96M83 1385 aa31.45■■■□□ 2.63
SLC12A4-205ENST00000570616 LTN1O94822 1766 aa31.44■■■□□ 2.62
SLC12A4-205ENST00000570616 BARGINQ6ZT62 677 aa31.44■■■□□ 2.62
SLC12A4-205ENST00000570616 TCP11L2Q8N4U5 519 aa31.44■■■□□ 2.62
SLC12A4-205ENST00000570616 THSD7AQ9UPZ6 1657 aa31.44■■■□□ 2.62
SLC12A4-205ENST00000570616 MAP3K19Q56UN5 1328 aa31.44■■■□□ 2.62
SLC12A4-205ENST00000570616 USP35Q9P2H5 1018 aa31.43■■■□□ 2.62
SLC12A4-205ENST00000570616 THRAP3Q9Y2W1 955 aaKnown RBP31.43■■■□□ 2.62
SLC12A4-205ENST00000570616 BLMP54132 1417 aaPredicted RBP31.42■■■□□ 2.62
SLC12A4-205ENST00000570616 A0A0G2JS52 829 aa31.42■■■□□ 2.62
SLC12A4-205ENST00000570616 MYT1Q01538 1121 aa31.42■■■□□ 2.62
SLC12A4-205ENST00000570616 WASHC2AQ641Q2 1341 aa31.42■■■□□ 2.62
SLC12A4-205ENST00000570616 TOM1L2Q6ZVM7 507 aa31.41■■■□□ 2.62
SLC12A4-205ENST00000570616 IP6K1Q92551 441 aa31.4■■■□□ 2.62
SLC12A4-205ENST00000570616 ERBB3P21860 1342 aa31.4■■■□□ 2.62
SLC12A4-205ENST00000570616 RTL1A6NKG5 1358 aa31.4■■■□□ 2.62
SLC12A4-205ENST00000570616 CSB-PGBD3P0DP91 1061 aa31.39■■■□□ 2.62
SLC12A4-205ENST00000570616 FBLN1P23142 703 aa31.39■■■□□ 2.62
SLC12A4-205ENST00000570616 NSD2O96028 1365 aa31.39■■■□□ 2.62
SLC12A4-205ENST00000570616 RRS1Q15050 365 aaKnown RBP31.36■■■□□ 2.61
SLC12A4-205ENST00000570616 KRT27Q7Z3Y8 459 aa31.36■■■□□ 2.61
SLC12A4-205ENST00000570616 UPF1Q92900 1129 aaKnown RBP eCLIP31.36■■■□□ 2.612e-10■□□□□ 9.4
SLC12A4-205ENST00000570616 CARD10Q9BWT7 1032 aa31.36■■■□□ 2.61
SLC12A4-205ENST00000570616 RGPD5Q99666 1765 aa31.35■■■□□ 2.61
SLC12A4-205ENST00000570616 HOXC9P31274 260 aa31.35■■■□□ 2.61
SLC12A4-205ENST00000570616 AMPHP49418 695 aa31.35■■■□□ 2.61
SLC12A4-205ENST00000570616 KNSTRNQ9Y448 316 aa31.35■■■□□ 2.61
SLC12A4-205ENST00000570616 KIF24Q5T7B8 1368 aa31.34■■■□□ 2.61
SLC12A4-205ENST00000570616 ANKRD24Q8TF21 1146 aa31.34■■■□□ 2.61
SLC12A4-205ENST00000570616 BRWD3Q6RI45 1802 aa31.33■■■□□ 2.61
SLC12A4-205ENST00000570616 ANKRD26Q9UPS8 1709 aa31.31■■■□□ 2.6
SLC12A4-205ENST00000570616 ZEB1P37275 1124 aaPredicted RBP31.29■■■□□ 2.6
SLC12A4-205ENST00000570616 FLT4P35916 1363 aa31.29■■■□□ 2.6
SLC12A4-205ENST00000570616 NLRP2Q9NX02 1062 aa31.28■■■□□ 2.6
SLC12A4-205ENST00000570616 AMER1Q5JTC6 1135 aaPredicted RBP31.27■■■□□ 2.6
SLC12A4-205ENST00000570616 CDCA7Q9BWT1 371 aaPredicted RBP31.27■■■□□ 2.6
SLC12A4-205ENST00000570616 DISP2A7MBM2 1401 aa31.26■■■□□ 2.6
SLC12A4-205ENST00000570616 PER1O15534 1290 aaPredicted RBP31.26■■■□□ 2.59
SLC12A4-205ENST00000570616 INSRP06213 1382 aa31.26■■■□□ 2.59
SLC12A4-205ENST00000570616 PARP4Q9UKK3 1724 aaKnown RBP31.26■■■□□ 2.59
SLC12A4-205ENST00000570616 PEAK1Q9H792 1746 aa31.25■■■□□ 2.59
SLC12A4-205ENST00000570616 EMILIN1Q9Y6C2 1016 aa31.25■■■□□ 2.59
SLC12A4-205ENST00000570616 LTV1Q96GA3 475 aaPredicted RBP31.24■■■□□ 2.59
SLC12A4-205ENST00000570616 FAM208AQ9UK61 1670 aaKnown RBP31.24■■■□□ 2.59
SLC12A4-205ENST00000570616 SMG6Q86US8 1419 aaKnown RBP31.23■■■□□ 2.59
SLC12A4-205ENST00000570616 WNK3Q9BYP7 1800 aa31.22■■■□□ 2.59
SLC12A4-205ENST00000570616 POLKQ9UBT6 870 aa31.22■■■□□ 2.59
SLC12A4-205ENST00000570616 LRRC37A3O60309 1634 aa31.21■■■□□ 2.59
SLC12A4-205ENST00000570616 PDE3BQ13370 1112 aa31.21■■■□□ 2.59
SLC12A4-205ENST00000570616 HSP90AB2PQ58FF8 381 aa31.21■■■□□ 2.59
SLC12A4-205ENST00000570616 MORC1Q86VD1 984 aa31.21■■■□□ 2.59
SLC12A4-205ENST00000570616 TNNT2P45379 298 aaPredicted RBP31.2■■■□□ 2.59
SLC12A4-205ENST00000570616 DDB1Q16531 1140 aa31.19■■■□□ 2.58
SLC12A4-205ENST00000570616 CCDC125Q86Z20 511 aa31.19■■■□□ 2.58
SLC12A4-205ENST00000570616 NPC1L1Q9UHC9 1359 aa31.18■■■□□ 2.58
SLC12A4-205ENST00000570616 PPM1GO15355 546 aaPredicted RBP31.17■■■□□ 2.58
SLC12A4-205ENST00000570616 IL2RBP14784 551 aa31.16■■■□□ 2.58
SLC12A4-205ENST00000570616 FAM182BQ5T319 152 aa31.16■■■□□ 2.58
SLC12A4-205ENST00000570616 TNS2Q63HR2 1409 aa31.15■■■□□ 2.58
SLC12A4-205ENST00000570616 EP400Q96L91 3159 aa31.14■■■□□ 2.58
SLC12A4-205ENST00000570616 FAM196AQ6ZSG2 479 aa31.14■■■□□ 2.58
SLC12A4-205ENST00000570616 NBPF6Q5VWK0 638 aa31.12■■■□□ 2.57
SLC12A4-205ENST00000570616 NBPF4Q96M43 638 aa31.12■■■□□ 2.57
SLC12A4-205ENST00000570616 CC2D1BQ5T0F9 858 aaKnown RBP31.11■■■□□ 2.57
SLC12A4-205ENST00000570616 MAP2P11137 1827 aaKnown RBP31.1■■■□□ 2.57
SLC12A4-205ENST00000570616 OVOS2A0A0G2JMS6 1433 aa31.1■■■□□ 2.57
SLC12A4-205ENST00000570616 EXOC5O00471 708 aa31.1■■■□□ 2.57
SLC12A4-205ENST00000570616 SF3B2Q13435 895 aaKnown RBP31.07■■■□□ 2.56
SLC12A4-205ENST00000570616 MARCH10Q8NA82 808 aaPredicted RBP31.06■■■□□ 2.56
SLC12A4-205ENST00000570616 BCL9O00512 1426 aa31.06■■■□□ 2.56
SLC12A4-205ENST00000570616 NCAPD2Q15021 1401 aa31.06■■■□□ 2.56
SLC12A4-205ENST00000570616 USHBP1Q8N6Y0 703 aa31.05■■■□□ 2.56
SLC12A4-205ENST00000570616 RGPD2P0DJD1 1756 aa31.04■■■□□ 2.56
SLC12A4-205ENST00000570616 MEGF6O75095 1541 aa31.03■■■□□ 2.56
SLC12A4-205ENST00000570616 EIF4A2Q14240 407 aaKnown RBP31.02■■■□□ 2.56
SLC12A4-205ENST00000570616 RGPD1P0DJD0 1748 aa31.01■■■□□ 2.56
SLC12A4-205ENST00000570616 TRIM37O94972 964 aa31■■■□□ 2.55
SLC12A4-205ENST00000570616 RAPGEF4Q8WZA2 1011 aa31■■■□□ 2.55
SLC12A4-205ENST00000570616 EYA1Q99502 592 aa31■■■□□ 2.55
SLC12A4-205ENST00000570616 BAG6P46379 1132 aa30.97■■■□□ 2.55
SLC12A4-205ENST00000570616 TNS1Q9HBL0 1735 aaKnown RBP30.96■■■□□ 2.55
SLC12A4-205ENST00000570616 MTHFSP49914 203 aa30.96■■■□□ 2.55
SLC12A4-205ENST00000570616 CNGB1Q14028 1251 aaPredicted RBP30.96■■■□□ 2.55
SLC12A4-205ENST00000570616 DEFB132Q7Z7B7 95 aa30.96■■■□□ 2.55
SLC12A4-205ENST00000570616 TATP17735 454 aaPredicted RBP30.95■■■□□ 2.55
SLC12A4-205ENST00000570616 ZCRB1Q8TBF4 217 aaKnown RBP30.95■■■□□ 2.55
SLC12A4-205ENST00000570616 IGSF1Q8N6C5 1336 aa30.94■■■□□ 2.54
SLC12A4-205ENST00000570616 DDX54Q8TDD1 881 aaKnown RBP30.9■■■□□ 2.54
SLC12A4-205ENST00000570616 PLEKHG2Q9H7P9 1386 aa30.9■■■□□ 2.54
SLC12A4-205ENST00000570616 IL13P35225 146 aa30.89■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms