RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 TUBGCP6Q96RT7 1819 aa10.28□□□□□ -0.76
HERPUD1-217ENST00000569429 TULP4Q9NRJ4 1543 aa10.28□□□□□ -0.76
HERPUD1-217ENST00000569429 TNS2Q63HR2 1409 aa10.27□□□□□ -0.77
HERPUD1-217ENST00000569429 HTRA3P83110 453 aa10.27□□□□□ -0.77
HERPUD1-217ENST00000569429 HSPA1AP0DMV8 641 aaKnown RBP10.26□□□□□ -0.77
HERPUD1-217ENST00000569429 HSPA1BP0DMV9 641 aaKnown RBP10.26□□□□□ -0.77
HERPUD1-217ENST00000569429 ZNF827Q17R98 1081 aa10.26□□□□□ -0.77
HERPUD1-217ENST00000569429 MARCH10Q8NA82 808 aaPredicted RBP10.26□□□□□ -0.77
HERPUD1-217ENST00000569429 ROCK1Q13464 1354 aa10.26□□□□□ -0.77
HERPUD1-217ENST00000569429 YTHDC2Q9H6S0 1430 aaKnown RBP10.25□□□□□ -0.77
HERPUD1-217ENST00000569429 CPDO75976 1380 aa10.25□□□□□ -0.77
HERPUD1-217ENST00000569429 CRB1P82279 1406 aa10.24□□□□□ -0.77
HERPUD1-217ENST00000569429 COL5A2P05997 1499 aaPredicted RBP10.24□□□□□ -0.77
HERPUD1-217ENST00000569429 PAK3O75914 559 aaPredicted RBP10.24□□□□□ -0.77
HERPUD1-217ENST00000569429 TMEM132EQ6IEE7 984 aa10.24□□□□□ -0.77
HERPUD1-217ENST00000569429 RBM46Q8TBY0 533 aaKnown RBP10.24□□□□□ -0.77
HERPUD1-217ENST00000569429 NHSQ6T4R5 1651 aa10.24□□□□□ -0.77
HERPUD1-217ENST00000569429 ANKRD30BQ9BXX2 1392 aa10.24□□□□□ -0.77
HERPUD1-217ENST00000569429 FAM161AQ3B820 660 aa10.23□□□□□ -0.77
HERPUD1-217ENST00000569429 AKT1S1Q96B36 256 aa10.23□□□□□ -0.77
HERPUD1-217ENST00000569429 ADGRF5Q8IZF2 1346 aa10.23□□□□□ -0.77
HERPUD1-217ENST00000569429 BTAF1O14981 1849 aa10.23□□□□□ -0.77
HERPUD1-217ENST00000569429 FSTL1Q12841 308 aa10.22□□□□□ -0.77
HERPUD1-217ENST00000569429 PNPLA7Q6ZV29 1317 aa10.22□□□□□ -0.77
HERPUD1-217ENST00000569429 BRD4O60885 1362 aaPredicted RBP10.22□□□□□ -0.77
HERPUD1-217ENST00000569429 KIAA1210Q9ULL0 1709 aa10.21□□□□□ -0.77
HERPUD1-217ENST00000569429 FAM50AQ14320 339 aaKnown RBP10.21□□□□□ -0.77
HERPUD1-217ENST00000569429 CDCA7Q9BWT1 371 aaPredicted RBP10.21□□□□□ -0.77
HERPUD1-217ENST00000569429 CD2APQ9Y5K6 639 aa10.21□□□□□ -0.77
HERPUD1-217ENST00000569429 EIF3AQ14152 1382 aaKnown RBP10.2□□□□□ -0.78
HERPUD1-217ENST00000569429 NGDNQ8NEJ9 315 aaKnown RBP10.2□□□□□ -0.78
HERPUD1-217ENST00000569429 LRRC4BQ9NT99 713 aa10.2□□□□□ -0.78
HERPUD1-217ENST00000569429 CICQ96RK0 1608 aaPredicted RBP10.19□□□□□ -0.78
HERPUD1-217ENST00000569429 PRR36Q9H6K5 1346 aa10.19□□□□□ -0.78
HERPUD1-217ENST00000569429 ITSN1Q15811 1721 aa10.19□□□□□ -0.78
HERPUD1-217ENST00000569429 PIK3C2GO75747 1445 aa10.17□□□□□ -0.78
HERPUD1-217ENST00000569429 PRAM1Q96QH2 718 aa10.17□□□□□ -0.78
HERPUD1-217ENST00000569429 NMRK2Q9NPI5 230 aa10.17□□□□□ -0.78
HERPUD1-217ENST00000569429 USP19O94966 1318 aa10.16□□□□□ -0.78
HERPUD1-217ENST00000569429 SAFB2Q14151 953 aaKnown RBP eCLIP10.16□□□□□ -0.78
HERPUD1-217ENST00000569429 SLC27A3Q5K4L6 730 aa10.16□□□□□ -0.78
HERPUD1-217ENST00000569429 NUTM2GQ5VZR2 741 aa10.16□□□□□ -0.78
HERPUD1-217ENST00000569429 TRPM1Q7Z4N2 1603 aa10.15□□□□□ -0.78
HERPUD1-217ENST00000569429 EXOC5O00471 708 aa10.15□□□□□ -0.78
HERPUD1-217ENST00000569429 RGS19P49795 217 aa10.15□□□□□ -0.78
HERPUD1-217ENST00000569429 MLLT1Q03111 559 aaPredicted RBP10.15□□□□□ -0.78
HERPUD1-217ENST00000569429 TOM1L2Q6ZVM7 507 aa10.15□□□□□ -0.78
HERPUD1-217ENST00000569429 C16orf71Q8IYS4 520 aaPredicted RBP10.15□□□□□ -0.78
HERPUD1-217ENST00000569429 PRDM10Q9NQV6 1147 aa10.15□□□□□ -0.78
HERPUD1-217ENST00000569429 TFCP2L1Q9NZI6 479 aa10.15□□□□□ -0.78
HERPUD1-217ENST00000569429 COL18A1P39060 1754 aa10.15□□□□□ -0.78
HERPUD1-217ENST00000569429 USP6P35125 1406 aa10.15□□□□□ -0.79
HERPUD1-217ENST00000569429 RGPD5Q99666 1765 aa10.14□□□□□ -0.79
HERPUD1-217ENST00000569429 PIK3C2AO00443 1686 aa10.13□□□□□ -0.79
HERPUD1-217ENST00000569429 TNRC18O15417 2968 aaPredicted RBP10.13□□□□□ -0.79
HERPUD1-217ENST00000569429 GCP02774 474 aa10.13□□□□□ -0.79
HERPUD1-217ENST00000569429 HIRIP3Q9BW71 556 aaPredicted RBP10.13□□□□□ -0.79
HERPUD1-217ENST00000569429 C14orf93Q9H972 538 aaKnown RBP10.13□□□□□ -0.79
HERPUD1-217ENST00000569429 POGKQ9P215 609 aa10.13□□□□□ -0.79
HERPUD1-217ENST00000569429 C10orf71Q711Q0 1435 aa10.13□□□□□ -0.79
HERPUD1-217ENST00000569429 WDR17Q8IZU2 1322 aa10.12□□□□□ -0.79
HERPUD1-217ENST00000569429 IGSF1Q8N6C5 1336 aa10.12□□□□□ -0.79
HERPUD1-217ENST00000569429 WASLO00401 505 aaPredicted RBP10.12□□□□□ -0.79
HERPUD1-217ENST00000569429 APLP2Q06481 763 aa10.12□□□□□ -0.79
HERPUD1-217ENST00000569429 ABTB2Q8N961 1025 aa10.12□□□□□ -0.79
HERPUD1-217ENST00000569429 ACSBG1Q96GR2 724 aa10.12□□□□□ -0.79
HERPUD1-217ENST00000569429 LY75O60449 1722 aa10.12□□□□□ -0.79
HERPUD1-217ENST00000569429 NLRP13Q86W25 1043 aa10.1□□□□□ -0.79
HERPUD1-217ENST00000569429 SMC1BQ8NDV3 1235 aa10.1□□□□□ -0.79
HERPUD1-217ENST00000569429 CARD10Q9BWT7 1032 aa10.1□□□□□ -0.79
HERPUD1-217ENST00000569429 POLR3AO14802 1390 aaPredicted RBP10.1□□□□□ -0.79
HERPUD1-217ENST00000569429 TNRC6CQ9HCJ0 1690 aaKnown RBP10.09□□□□□ -0.79
HERPUD1-217ENST00000569429 SPATA31E1Q6ZUB1 1445 aa10.09□□□□□ -0.79
HERPUD1-217ENST00000569429 ABCC6O95255 1503 aa10.09□□□□□ -0.79
HERPUD1-217ENST00000569429 COL23A1Q86Y22 540 aaPredicted RBP10.09□□□□□ -0.79
HERPUD1-217ENST00000569429 ABHD8Q96I13 439 aa10.09□□□□□ -0.79
HERPUD1-217ENST00000569429 PKD1L3Q7Z443 1732 aa10.08□□□□□ -0.8
HERPUD1-217ENST00000569429 FOXN1O15353 648 aa10.08□□□□□ -0.8
HERPUD1-217ENST00000569429 PXDNLA1KZ92 1463 aa10.08□□□□□ -0.8
HERPUD1-217ENST00000569429 MINK1Q8N4C8 1332 aaPredicted RBP10.07□□□□□ -0.8
HERPUD1-217ENST00000569429 PLEKHG2Q9H7P9 1386 aa10.07□□□□□ -0.8
HERPUD1-217ENST00000569429 RGL3Q3MIN7 710 aa10.07□□□□□ -0.8
HERPUD1-217ENST00000569429 MSL1Q68DK7 614 aa10.07□□□□□ -0.8
HERPUD1-217ENST00000569429 SBF1O95248 1867 aa10.06□□□□□ -0.8
HERPUD1-217ENST00000569429 CCDC7Q96M83 1385 aa10.06□□□□□ -0.8
HERPUD1-217ENST00000569429 KIF13BQ9NQT8 1826 aa10.06□□□□□ -0.8
HERPUD1-217ENST00000569429 MSH5O43196 834 aa10.06□□□□□ -0.8
HERPUD1-217ENST00000569429 CFAP70Q5T0N1 1121 aa10.06□□□□□ -0.8
HERPUD1-217ENST00000569429 NUDT16Q96DE0 195 aaKnown RBP10.06□□□□□ -0.8
HERPUD1-217ENST00000569429 AXIN2Q9Y2T1 843 aa10.06□□□□□ -0.8
HERPUD1-217ENST00000569429 ACEP12821 1306 aa10.06□□□□□ -0.8
HERPUD1-217ENST00000569429 KDM2BQ8NHM5 1336 aa10.06□□□□□ -0.8
HERPUD1-217ENST00000569429 BRCA1P38398 1863 aaKnown RBP10.05□□□□□ -0.8
HERPUD1-217ENST00000569429 CTCFP49711 727 aaPredicted RBP10.05□□□□□ -0.8
HERPUD1-217ENST00000569429 SLIT3O75094 1523 aa10.05□□□□□ -0.8
HERPUD1-217ENST00000569429 ARFGEF1Q9Y6D6 1849 aa10.05□□□□□ -0.8
HERPUD1-217ENST00000569429 KCPQ6ZWJ8 1503 aa10.04□□□□□ -0.8
HERPUD1-217ENST00000569429 USP54Q70EL1 1684 aa10.04□□□□□ -0.8
HERPUD1-217ENST00000569429 KCNQ4P56696 695 aa10.04□□□□□ -0.8
HERPUD1-217ENST00000569429 PPIP5K1Q6PFW1 1433 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms