RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 CD163L1Q9NR16 1453 aa21.9■■□□□ 1.1
USB1-215ENST00000569252 NLRP6P59044 892 aa21.89■■□□□ 1.09
USB1-215ENST00000569252 NLRP13Q86W25 1043 aa21.89■■□□□ 1.09
USB1-215ENST00000569252 NSD3Q9BZ95 1437 aa21.88■■□□□ 1.09
USB1-215ENST00000569252 COG3Q96JB2 828 aa21.86■■□□□ 1.09
USB1-215ENST00000569252 AKAP12Q02952 1782 aa21.85■■□□□ 1.09
USB1-215ENST00000569252 CAMKK2Q96RR4 588 aa21.85■■□□□ 1.09
USB1-215ENST00000569252 MYOM1P52179 1685 aa21.85■■□□□ 1.09
USB1-215ENST00000569252 NRKQ7Z2Y5 1582 aa21.84■■□□□ 1.09
USB1-215ENST00000569252 NME9Q86XW9 330 aa21.84■■□□□ 1.09
USB1-215ENST00000569252 DISP2A7MBM2 1401 aa21.83■■□□□ 1.09
USB1-215ENST00000569252 CAMTA1Q9Y6Y1 1673 aa21.83■■□□□ 1.09
USB1-215ENST00000569252 FYB1O15117 783 aa21.83■■□□□ 1.09
USB1-215ENST00000569252 APBA3O96018 575 aa21.83■■□□□ 1.09
USB1-215ENST00000569252 LARP1Q6PKG0 1096 aaKnown RBP21.83■■□□□ 1.09
USB1-215ENST00000569252 SSH2Q76I76 1423 aa21.82■■□□□ 1.08
USB1-215ENST00000569252 PER1O15534 1290 aaPredicted RBP21.82■■□□□ 1.08
USB1-215ENST00000569252 CNGB1Q14028 1251 aaPredicted RBP21.82■■□□□ 1.08
USB1-215ENST00000569252 GGNBP2Q9H3C7 697 aa21.82■■□□□ 1.08
USB1-215ENST00000569252 NUP188Q5SRE5 1749 aa21.8■■□□□ 1.08
USB1-215ENST00000569252 MON2Q7Z3U7 1717 aa21.8■■□□□ 1.08
USB1-215ENST00000569252 KCNH5Q8NCM2 988 aa21.8■■□□□ 1.08
USB1-215ENST00000569252 ZBTB7CA1YPR0 619 aa21.79■■□□□ 1.08
USB1-215ENST00000569252 CC2D1BQ5T0F9 858 aaKnown RBP21.79■■□□□ 1.08
USB1-215ENST00000569252 MORC1Q86VD1 984 aa21.79■■□□□ 1.08
USB1-215ENST00000569252 RREB1Q92766 1687 aa21.79■■□□□ 1.08
USB1-215ENST00000569252 EVA1CP58658 441 aa21.78■■□□□ 1.08
USB1-215ENST00000569252 LMO7Q8WWI1 1683 aa21.78■■□□□ 1.08
USB1-215ENST00000569252 NSD2O96028 1365 aa21.77■■□□□ 1.08
USB1-215ENST00000569252 FAM196AQ6ZSG2 479 aa21.77■■□□□ 1.08
USB1-215ENST00000569252 USP31Q70CQ4 1352 aa21.76■■□□□ 1.07
USB1-215ENST00000569252 SOX12O15370 315 aa21.76■■□□□ 1.07
USB1-215ENST00000569252 AMER1Q5JTC6 1135 aaPredicted RBP21.76■■□□□ 1.07
USB1-215ENST00000569252 GCP02774 474 aa21.75■■□□□ 1.07
USB1-215ENST00000569252 PDE3BQ13370 1112 aa21.74■■□□□ 1.07
USB1-215ENST00000569252 PTF1AQ7RTS3 328 aa21.73■■□□□ 1.07
USB1-215ENST00000569252 TNNT2P45379 298 aaPredicted RBP21.72■■□□□ 1.07
USB1-215ENST00000569252 NPC1L1Q9UHC9 1359 aa21.72■■□□□ 1.07
USB1-215ENST00000569252 BARGINQ6ZT62 677 aa21.71■■□□□ 1.07
USB1-215ENST00000569252 TCP11L2Q8N4U5 519 aa21.71■■□□□ 1.07
USB1-215ENST00000569252 USP19O94966 1318 aa21.71■■□□□ 1.07
USB1-215ENST00000569252 COL5A2P05997 1499 aaPredicted RBP21.7■■□□□ 1.06
USB1-215ENST00000569252 ANP32CO43423 234 aa21.69■■□□□ 1.06
USB1-215ENST00000569252 PIK3C2AO00443 1686 aa21.69■■□□□ 1.06
USB1-215ENST00000569252 RALBP1Q15311 655 aa21.68■■□□□ 1.06
USB1-215ENST00000569252 KIF20BQ96Q89 1820 aa21.67■■□□□ 1.06
USB1-215ENST00000569252 CPDO75976 1380 aa21.67■■□□□ 1.06
USB1-215ENST00000569252 PARP4Q9UKK3 1724 aaKnown RBP21.66■■□□□ 1.06
USB1-215ENST00000569252 LRRC37A3O60309 1634 aa21.66■■□□□ 1.06
USB1-215ENST00000569252 OVOS2A0A0J9YW53 1432 aa21.66■■□□□ 1.06
USB1-215ENST00000569252 OVOS2Q6IE36 1432 aa21.66■■□□□ 1.06
USB1-215ENST00000569252 AMPHP49418 695 aa21.66■■□□□ 1.06
USB1-215ENST00000569252 PDGFDQ9GZP0 370 aaPredicted RBP21.66■■□□□ 1.06
USB1-215ENST00000569252 PEAK1Q9H792 1746 aa21.66■■□□□ 1.06
USB1-215ENST00000569252 PPM1GO15355 546 aaPredicted RBP21.65■■□□□ 1.06
USB1-215ENST00000569252 DIEXFQ68CQ4 756 aaKnown RBP21.64■■□□□ 1.05
USB1-215ENST00000569252 ANO8Q9HCE9 1232 aaPredicted RBP21.64■■□□□ 1.05
USB1-215ENST00000569252 PARD3Q8TEW0 1356 aa21.63■■□□□ 1.05
USB1-215ENST00000569252 RRS1Q15050 365 aaKnown RBP21.62■■□□□ 1.05
USB1-215ENST00000569252 ARHGEF25Q86VW2 580 aa21.62■■□□□ 1.05
USB1-215ENST00000569252 SBF2Q86WG5 1849 aa21.62■■□□□ 1.05
USB1-215ENST00000569252 FBLN1P23142 703 aa21.61■■□□□ 1.05
USB1-215ENST00000569252 CRB1P82279 1406 aa21.61■■□□□ 1.05
USB1-215ENST00000569252 AATKQ6ZMQ8 1374 aa21.61■■□□□ 1.05
USB1-215ENST00000569252 SLIT3O75094 1523 aa21.6■■□□□ 1.05
USB1-215ENST00000569252 YY1P25490 414 aa21.6■■□□□ 1.05
USB1-215ENST00000569252 NBPF14Q5TI25 921 aa21.6■■□□□ 1.05
USB1-215ENST00000569252 AXIN2Q9Y2T1 843 aa21.6■■□□□ 1.05
USB1-215ENST00000569252 COL18A1P39060 1754 aa21.6■■□□□ 1.05
USB1-215ENST00000569252 RGPD5Q99666 1765 aa21.6■■□□□ 1.05
USB1-215ENST00000569252 WNK3Q9BYP7 1800 aa21.59■■□□□ 1.05
USB1-215ENST00000569252 TOM1L2Q6ZVM7 507 aa21.58■■□□□ 1.05
USB1-215ENST00000569252 IP6K1Q92551 441 aa21.58■■□□□ 1.05
USB1-215ENST00000569252 PRKRIP1Q9H875 184 aaPredicted RBP21.58■■□□□ 1.05
USB1-215ENST00000569252 POLKQ9UBT6 870 aa21.58■■□□□ 1.05
USB1-215ENST00000569252 PPP1R1BQ9UD71 204 aaPredicted RBP21.58■■□□□ 1.05
USB1-215ENST00000569252 MAP3K19Q56UN5 1328 aa21.57■■□□□ 1.04
USB1-215ENST00000569252 OVOS2A0A0G2JMS6 1433 aa21.57■■□□□ 1.04
USB1-215ENST00000569252 MTHFSP49914 203 aa21.57■■□□□ 1.04
USB1-215ENST00000569252 CFAP53Q96M91 514 aa21.57■■□□□ 1.04
USB1-215ENST00000569252 USP54Q70EL1 1684 aa21.56■■□□□ 1.04
USB1-215ENST00000569252 ANKRD26Q9UPS8 1709 aa21.56■■□□□ 1.04
USB1-215ENST00000569252 KCNQ2O43526 872 aa21.56■■□□□ 1.04
USB1-215ENST00000569252 PPP2R1AP30153 589 aa21.56■■□□□ 1.04
USB1-215ENST00000569252 MARCH10Q8NA82 808 aaPredicted RBP21.56■■□□□ 1.04
USB1-215ENST00000569252 SPON1Q9HCB6 807 aa21.56■■□□□ 1.04
USB1-215ENST00000569252 THRAP3Q9Y2W1 955 aaKnown RBP21.56■■□□□ 1.04
USB1-215ENST00000569252 EMILIN1Q9Y6C2 1016 aa21.56■■□□□ 1.04
USB1-215ENST00000569252 CASZ1Q86V15 1759 aa21.55■■□□□ 1.04
USB1-215ENST00000569252 KIF24Q5T7B8 1368 aa21.54■■□□□ 1.04
USB1-215ENST00000569252 ZBTB7AO95365 584 aa21.54■■□□□ 1.04
USB1-215ENST00000569252 CSB-PGBD3P0DP91 1061 aa21.54■■□□□ 1.04
USB1-215ENST00000569252 HOXC9P31274 260 aa21.54■■□□□ 1.04
USB1-215ENST00000569252 DDB1Q16531 1140 aa21.54■■□□□ 1.04
USB1-215ENST00000569252 PROM2Q8N271 834 aa21.54■■□□□ 1.04
USB1-215ENST00000569252 UTRNP46939 3433 aa21.54■■□□□ 1.04
USB1-215ENST00000569252 MYBBP1AQ9BQG0 1328 aaKnown RBP21.54■■□□□ 1.04
USB1-215ENST00000569252 NFAT5O94916 1531 aa21.53■■□□□ 1.04
USB1-215ENST00000569252 FLT4P35916 1363 aa21.52■■□□□ 1.04
USB1-215ENST00000569252 LTV1Q96GA3 475 aaPredicted RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms