RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 CSB-PGBD3P0DP91 1061 aa17.6■□□□□ 0.41
CDT1-203ENST00000569140 AATKQ6ZMQ8 1374 aa17.6■□□□□ 0.41
CDT1-203ENST00000569140 COL5A2P05997 1499 aaPredicted RBP17.59■□□□□ 0.41
CDT1-203ENST00000569140 WASHC2AQ641Q2 1341 aa17.59■□□□□ 0.41
CDT1-203ENST00000569140 CDK12Q9NYV4 1490 aaPredicted RBP17.58■□□□□ 0.41
CDT1-203ENST00000569140 LARP1Q6PKG0 1096 aaKnown RBP17.58■□□□□ 0.4
CDT1-203ENST00000569140 KNSTRNQ9Y448 316 aa17.58■□□□□ 0.4
CDT1-203ENST00000569140 RGPD5Q99666 1765 aa17.58■□□□□ 0.4
CDT1-203ENST00000569140 FBLN1P23142 703 aa17.57■□□□□ 0.4
CDT1-203ENST00000569140 FAM98CQ17RN3 349 aaKnown RBP17.57■□□□□ 0.4
CDT1-203ENST00000569140 COL18A1P39060 1754 aa17.56■□□□□ 0.4
CDT1-203ENST00000569140 SPATA31A5Q5VU36 1347 aa17.56■□□□□ 0.4
CDT1-203ENST00000569140 SPATA31A7Q8IWB4 1347 aa17.56■□□□□ 0.4
CDT1-203ENST00000569140 TNNT2P45379 298 aaPredicted RBP17.56■□□□□ 0.4
CDT1-203ENST00000569140 AMPHP49418 695 aa17.56■□□□□ 0.4
CDT1-203ENST00000569140 CNGB1Q14028 1251 aaPredicted RBP17.56■□□□□ 0.4
CDT1-203ENST00000569140 RRS1Q15050 365 aaKnown RBP17.56■□□□□ 0.4
CDT1-203ENST00000569140 TOM1L2Q6ZVM7 507 aa17.56■□□□□ 0.4
CDT1-203ENST00000569140 AXIN2Q9Y2T1 843 aa17.56■□□□□ 0.4
CDT1-203ENST00000569140 ANKRD26Q9UPS8 1709 aa17.55■□□□□ 0.4
CDT1-203ENST00000569140 MAP3K19Q56UN5 1328 aa17.54■□□□□ 0.4
CDT1-203ENST00000569140 SPATA31A1Q5TZJ5 1347 aa17.54■□□□□ 0.4
CDT1-203ENST00000569140 ABCC6O95255 1503 aa17.54■□□□□ 0.4
CDT1-203ENST00000569140 LTV1Q96GA3 475 aaPredicted RBP17.54■□□□□ 0.4
CDT1-203ENST00000569140 CRB1P82279 1406 aa17.54■□□□□ 0.4
CDT1-203ENST00000569140 SOCS7O14512 581 aa17.53■□□□□ 0.4
CDT1-203ENST00000569140 PPM1GO15355 546 aaPredicted RBP17.53■□□□□ 0.4
CDT1-203ENST00000569140 SEPT12Q8IYM1 358 aa17.53■□□□□ 0.4
CDT1-203ENST00000569140 WDR17Q8IZU2 1322 aa17.52■□□□□ 0.4
CDT1-203ENST00000569140 ANKRD24Q8TF21 1146 aa17.52■□□□□ 0.4
CDT1-203ENST00000569140 NSD2O96028 1365 aa17.52■□□□□ 0.39
CDT1-203ENST00000569140 MORC1Q86VD1 984 aa17.51■□□□□ 0.39
CDT1-203ENST00000569140 TCP11L2Q8N4U5 519 aa17.51■□□□□ 0.39
CDT1-203ENST00000569140 BLMP54132 1417 aaPredicted RBP17.5■□□□□ 0.39
CDT1-203ENST00000569140 HOXC9P31274 260 aa17.5■□□□□ 0.39
CDT1-203ENST00000569140 IP6K1Q92551 441 aa17.5■□□□□ 0.39
CDT1-203ENST00000569140 NLRP2Q9NX02 1062 aa17.5■□□□□ 0.39
CDT1-203ENST00000569140 CC2D1BQ5T0F9 858 aaKnown RBP17.49■□□□□ 0.39
CDT1-203ENST00000569140 RTL1A6NKG5 1358 aa17.49■□□□□ 0.39
CDT1-203ENST00000569140 ERBB3P21860 1342 aa17.48■□□□□ 0.39
CDT1-203ENST00000569140 EMILIN1Q9Y6C2 1016 aa17.48■□□□□ 0.39
CDT1-203ENST00000569140 BRWD3Q6RI45 1802 aa17.48■□□□□ 0.39
CDT1-203ENST00000569140 SMG6Q86US8 1419 aaKnown RBP17.47■□□□□ 0.39
CDT1-203ENST00000569140 THRAP3Q9Y2W1 955 aaKnown RBP17.47■□□□□ 0.39
CDT1-203ENST00000569140 FLT4P35916 1363 aa17.47■□□□□ 0.39
CDT1-203ENST00000569140 PEAK1Q9H792 1746 aa17.47■□□□□ 0.39
CDT1-203ENST00000569140 THSD7AQ9UPZ6 1657 aa17.46■□□□□ 0.39
CDT1-203ENST00000569140 BARGINQ6ZT62 677 aa17.46■□□□□ 0.39
CDT1-203ENST00000569140 KRT27Q7Z3Y8 459 aa17.46■□□□□ 0.39
CDT1-203ENST00000569140 ONECUT3O60422 494 aaPredicted RBP17.45■□□□□ 0.38
CDT1-203ENST00000569140 AMER1Q5JTC6 1135 aaPredicted RBP17.45■□□□□ 0.38
CDT1-203ENST00000569140 CARD10Q9BWT7 1032 aa17.45■□□□□ 0.38
CDT1-203ENST00000569140 FAM208AQ9UK61 1670 aaKnown RBP17.45■□□□□ 0.38
CDT1-203ENST00000569140 MAP2P11137 1827 aaKnown RBP17.44■□□□□ 0.38
CDT1-203ENST00000569140 WNK3Q9BYP7 1800 aa17.44■□□□□ 0.38
CDT1-203ENST00000569140 HSP90AB2PQ58FF8 381 aa17.44■□□□□ 0.38
CDT1-203ENST00000569140 PER1O15534 1290 aaPredicted RBP17.43■□□□□ 0.38
CDT1-203ENST00000569140 PDE3BQ13370 1112 aa17.43■□□□□ 0.38
CDT1-203ENST00000569140 FAM182BQ5T319 152 aa17.42■□□□□ 0.38
CDT1-203ENST00000569140 POLKQ9UBT6 870 aa17.42■□□□□ 0.38
CDT1-203ENST00000569140 INSRP06213 1382 aa17.41■□□□□ 0.38
CDT1-203ENST00000569140 KIF24Q5T7B8 1368 aa17.41■□□□□ 0.38
CDT1-203ENST00000569140 RGPD2P0DJD1 1756 aa17.4■□□□□ 0.38
CDT1-203ENST00000569140 LRRC37A3O60309 1634 aa17.4■□□□□ 0.38
CDT1-203ENST00000569140 DDB1Q16531 1140 aa17.4■□□□□ 0.38
CDT1-203ENST00000569140 USHBP1Q8N6Y0 703 aa17.4■□□□□ 0.38
CDT1-203ENST00000569140 CDCA7Q9BWT1 371 aaPredicted RBP17.4■□□□□ 0.38
CDT1-203ENST00000569140 PARP4Q9UKK3 1724 aaKnown RBP17.4■□□□□ 0.38
CDT1-203ENST00000569140 IL2RBP14784 551 aa17.39■□□□□ 0.37
CDT1-203ENST00000569140 DDX10Q13206 875 aaKnown RBP17.39■□□□□ 0.37
CDT1-203ENST00000569140 UPF1Q92900 1129 aaKnown RBP eCLIP17.39■□□□□ 0.37
CDT1-203ENST00000569140 NBPF6Q5VWK0 638 aa17.37■□□□□ 0.37
CDT1-203ENST00000569140 NBPF4Q96M43 638 aa17.37■□□□□ 0.37
CDT1-203ENST00000569140 EXOC5O00471 708 aa17.36■□□□□ 0.37
CDT1-203ENST00000569140 NPC1L1Q9UHC9 1359 aa17.36■□□□□ 0.37
CDT1-203ENST00000569140 DISP2A7MBM2 1401 aa17.36■□□□□ 0.37
CDT1-203ENST00000569140 SF3B2Q13435 895 aaKnown RBP17.35■□□□□ 0.37
CDT1-203ENST00000569140 EIF4A2Q14240 407 aaKnown RBP17.34■□□□□ 0.37
CDT1-203ENST00000569140 TNS2Q63HR2 1409 aa17.34■□□□□ 0.37
CDT1-203ENST00000569140 RAPGEF4Q8WZA2 1011 aa17.34■□□□□ 0.37
CDT1-203ENST00000569140 MTHFSP49914 203 aa17.33■□□□□ 0.36
CDT1-203ENST00000569140 OVOS2A0A0G2JMS6 1433 aa17.32■□□□□ 0.36
CDT1-203ENST00000569140 TATP17735 454 aaPredicted RBP17.32■□□□□ 0.36
CDT1-203ENST00000569140 FAM196AQ6ZSG2 479 aa17.32■□□□□ 0.36
CDT1-203ENST00000569140 MEGF6O75095 1541 aa17.31■□□□□ 0.36
CDT1-203ENST00000569140 ZNF316A6NFI3 1004 aaPredicted RBP17.3■□□□□ 0.36
CDT1-203ENST00000569140 TRIM37O94972 964 aa17.3■□□□□ 0.36
CDT1-203ENST00000569140 DDX54Q8TDD1 881 aaKnown RBP17.3■□□□□ 0.36
CDT1-203ENST00000569140 EYA1Q99502 592 aa17.3■□□□□ 0.36
CDT1-203ENST00000569140 MARCH10Q8NA82 808 aaPredicted RBP17.29■□□□□ 0.36
CDT1-203ENST00000569140 RGPD1P0DJD0 1748 aa17.29■□□□□ 0.36
CDT1-203ENST00000569140 CCDC125Q86Z20 511 aa17.28■□□□□ 0.36
CDT1-203ENST00000569140 ZCRB1Q8TBF4 217 aaKnown RBP17.27■□□□□ 0.36
CDT1-203ENST00000569140 CFAP53Q96M91 514 aa17.27■□□□□ 0.36
CDT1-203ENST00000569140 DIAPH1O60610 1272 aaKnown RBP17.26■□□□□ 0.35
CDT1-203ENST00000569140 PPP2R1AP30153 589 aa17.26■□□□□ 0.35
CDT1-203ENST00000569140 IGSF1Q8N6C5 1336 aa17.25■□□□□ 0.35
CDT1-203ENST00000569140 BAG6P46379 1132 aa17.25■□□□□ 0.35
CDT1-203ENST00000569140 EP400Q96L91 3159 aa17.24■□□□□ 0.35
CDT1-203ENST00000569140 U2SURPO15042 1029 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms