RNA–Protein interactions for RNA: ENST00000568858.1

CBFB-209, Transcript of core-binding factor subunit beta, humanhuman

TSL 3

Gene CBFB, Length 914 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFB-209ENST00000568858 TRIM46Q7Z4K8 759 aa12.71□□□□□ -0.37
CBFB-209ENST00000568858 GJD4Q96KN9 370 aaPredicted RBP12.71□□□□□ -0.37
CBFB-209ENST00000568858 KCTD15Q96SI1 283 aaPredicted RBP12.71□□□□□ -0.37
CBFB-209ENST00000568858 DHX9Q08211 1270 aaKnown RBP12.7□□□□□ -0.38
CBFB-209ENST00000568858 MRPL14Q6P1L8 145 aaKnown RBP12.7□□□□□ -0.38
CBFB-209ENST00000568858 DZIP3Q86Y13 1208 aaKnown RBP12.7□□□□□ -0.38
CBFB-209ENST00000568858 ZNF775Q96BV0 537 aaPredicted RBP12.7□□□□□ -0.38
CBFB-209ENST00000568858 ITPKCQ96DU7 683 aa12.7□□□□□ -0.38
CBFB-209ENST00000568858 OCSTAMPQ9BR26 566 aa12.7□□□□□ -0.38
CBFB-209ENST00000568858 ZFAND3Q9H8U3 227 aa12.69□□□□□ -0.38
CBFB-209ENST00000568858 PGPEP1Q9NXJ5 209 aa12.69□□□□□ -0.38
CBFB-209ENST00000568858 ZBBXA8MT70 800 aa12.68□□□□□ -0.38
CBFB-209ENST00000568858 UPP2O95045 317 aa12.68□□□□□ -0.38
CBFB-209ENST00000568858 NDUFB9Q9Y6M9 179 aa12.68□□□□□ -0.38
CBFB-209ENST00000568858 SNRPBP14678 240 aaKnown RBP12.67□□□□□ -0.38
CBFB-209ENST00000568858 MTMR14Q8NCE2 650 aa12.67□□□□□ -0.38
CBFB-209ENST00000568858 ZNF592Q92610 1267 aa12.67□□□□□ -0.38
CBFB-209ENST00000568858 PRM3Q9NNZ6 103 aa12.66□□□□□ -0.38
CBFB-209ENST00000568858 ZFP42Q96MM3 310 aa12.65□□□□□ -0.38
CBFB-209ENST00000568858 PPP1R26Q5T8A7 1209 aaPredicted RBP12.64□□□□□ -0.39
CBFB-209ENST00000568858 MEIOBQ8N635 442 aa12.64□□□□□ -0.39
CBFB-209ENST00000568858 TRIM52Q96A61 297 aa12.64□□□□□ -0.39
CBFB-209ENST00000568858 ZNF330Q9Y3S2 320 aaPredicted RBP12.64□□□□□ -0.39
CBFB-209ENST00000568858 INTS6LQ5JSJ4 861 aaKnown RBP12.63□□□□□ -0.39
CBFB-209ENST00000568858 PURBQ96QR8 312 aaKnown RBP12.63□□□□□ -0.39
CBFB-209ENST00000568858 SNRKQ9NRH2 765 aa12.63□□□□□ -0.39
CBFB-209ENST00000568858 FBXO45P0C2W1 286 aa12.61□□□□□ -0.39
CBFB-209ENST00000568858 MCCD1P59942 119 aaPredicted RBP12.61□□□□□ -0.39
CBFB-209ENST00000568858 TSEN34Q9BSV6 310 aaKnown RBP12.61□□□□□ -0.39
CBFB-209ENST00000568858 NR1H3Q13133 447 aa12.6□□□□□ -0.39
CBFB-209ENST00000568858 SEPT12Q8IYM1 358 aa12.6□□□□□ -0.39
CBFB-209ENST00000568858 LINC00528Q8N1L1 170 aa12.6□□□□□ -0.39
CBFB-209ENST00000568858 PCDHB9Q9Y5E1 797 aa12.6□□□□□ -0.39
CBFB-209ENST00000568858 BMP2P12643 396 aa12.59□□□□□ -0.39
CBFB-209ENST00000568858 C6orf118Q5T5N4 469 aa12.58□□□□□ -0.4
CBFB-209ENST00000568858 CCDC125Q86Z20 511 aa12.58□□□□□ -0.4
CBFB-209ENST00000568858 ESPNB1AK53 854 aa12.57□□□□□ -0.4
CBFB-209ENST00000568858 RAB15P59190 212 aa12.56□□□□□ -0.4
CBFB-209ENST00000568858 TREML4Q6UXN2 200 aa12.55□□□□□ -0.4
CBFB-209ENST00000568858 Q6ZVU0 165 aa12.55□□□□□ -0.4
CBFB-209ENST00000568858 RNF20Q5VTR2 975 aa12.54□□□□□ -0.4
CBFB-209ENST00000568858 WFS1O76024 890 aa12.53□□□□□ -0.4
CBFB-209ENST00000568858 ERVH48-1M5A8F1 160 aa12.52□□□□□ -0.41
CBFB-209ENST00000568858 TERTO14746 1132 aaKnown RBP12.52□□□□□ -0.41
CBFB-209ENST00000568858 MAN1A2O60476 641 aa12.52□□□□□ -0.41
CBFB-209ENST00000568858 GPR37L1O60883 481 aa12.52□□□□□ -0.41
CBFB-209ENST00000568858 CBLBQ13191 982 aa12.52□□□□□ -0.41
CBFB-209ENST00000568858 NPAS3Q8IXF0 933 aa12.51□□□□□ -0.41
CBFB-209ENST00000568858 NXF1Q9UBU9 619 aaKnown RBP12.51□□□□□ -0.41
CBFB-209ENST00000568858 TBC1D2BQ9UPU7 963 aa12.51□□□□□ -0.41
CBFB-209ENST00000568858 ZNF784Q8NCA9 323 aaPredicted RBP12.5□□□□□ -0.41
CBFB-209ENST00000568858 SLC16A10Q8TF71 515 aa12.5□□□□□ -0.41
CBFB-209ENST00000568858 TMPRSS4Q9NRS4 437 aa12.5□□□□□ -0.41
CBFB-209ENST00000568858 GIGYF1O75420 1035 aaPredicted RBP12.49□□□□□ -0.41
CBFB-209ENST00000568858 NFX1Q12986 1120 aaKnown RBP12.49□□□□□ -0.41
CBFB-209ENST00000568858 SOS2Q07890 1332 aaPredicted RBP12.47□□□□□ -0.41
CBFB-209ENST00000568858 SPINT1O43278 529 aa12.47□□□□□ -0.41
CBFB-209ENST00000568858 ADH1AP07327 375 aa12.47□□□□□ -0.41
CBFB-209ENST00000568858 MCM6Q14566 821 aa12.47□□□□□ -0.41
CBFB-209ENST00000568858 TTLL8A6PVC2 850 aa12.46□□□□□ -0.41
CBFB-209ENST00000568858 EIF4G2P78344 907 aaKnown RBP eCLIP12.46□□□□□ -0.41
CBFB-209ENST00000568858 RELBQ01201 579 aa12.45□□□□□ -0.42
CBFB-209ENST00000568858 LILRA1O75019 489 aa12.44□□□□□ -0.42
CBFB-209ENST00000568858 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.44□□□□□ -0.42
CBFB-209ENST00000568858 AGBL1Q96MI9 1066 aa12.44□□□□□ -0.42
CBFB-209ENST00000568858 CYLDQ9NQC7 956 aa12.44□□□□□ -0.42
CBFB-209ENST00000568858 SOBPA7XYQ1 873 aa12.43□□□□□ -0.42
CBFB-209ENST00000568858 LCE2AQ5TA79 106 aaPredicted RBP12.43□□□□□ -0.42
CBFB-209ENST00000568858 GDPD2Q9HCC8 539 aa12.43□□□□□ -0.42
CBFB-209ENST00000568858 ABL2P42684 1182 aa12.42□□□□□ -0.42
CBFB-209ENST00000568858 WASHC4Q2M389 1173 aa12.42□□□□□ -0.42
CBFB-209ENST00000568858 DNMT3LQ9UJW3 386 aa12.42□□□□□ -0.42
CBFB-209ENST00000568858 IRF5Q13568 498 aa12.41□□□□□ -0.42
CBFB-209ENST00000568858 TMEM132AQ24JP5 1023 aa12.41□□□□□ -0.42
CBFB-209ENST00000568858 ESF1Q9H501 851 aaKnown RBP12.41□□□□□ -0.42
CBFB-209ENST00000568858 ADD1P35611 737 aaKnown RBP12.4□□□□□ -0.42
CBFB-209ENST00000568858 PTGIRP43119 386 aa12.4□□□□□ -0.42
CBFB-209ENST00000568858 CC2D2BQ6DHV5 1058 aa12.4□□□□□ -0.42
CBFB-209ENST00000568858 IRF7Q92985 503 aa12.4□□□□□ -0.42
CBFB-209ENST00000568858 POLMQ9NP87 494 aaPredicted RBP12.4□□□□□ -0.42
CBFB-209ENST00000568858 PCDHB11Q9Y5F2 797 aa12.4□□□□□ -0.42
CBFB-209ENST00000568858 H3BM21 787 aa12.39□□□□□ -0.43
CBFB-209ENST00000568858 ERVK-9P63128 1117 aa12.39□□□□□ -0.43
CBFB-209ENST00000568858 FLIIQ13045 1269 aa12.39□□□□□ -0.43
CBFB-209ENST00000568858 WWC1Q8IX03 1113 aa12.39□□□□□ -0.43
CBFB-209ENST00000568858 INSM2Q96T92 566 aaPredicted RBP12.38□□□□□ -0.43
CBFB-209ENST00000568858 ZNF395Q9H8N7 513 aaPredicted RBP12.38□□□□□ -0.43
CBFB-209ENST00000568858 CEP126Q9P2H0 1117 aa12.38□□□□□ -0.43
CBFB-209ENST00000568858 ATP5J2-PTCD1G3V325 749 aa12.37□□□□□ -0.43
CBFB-209ENST00000568858 CYP2U1Q7Z449 544 aa12.37□□□□□ -0.43
CBFB-209ENST00000568858 CTSOP43234 321 aaPredicted RBP12.36□□□□□ -0.43
CBFB-209ENST00000568858 VAC14Q08AM6 782 aa12.36□□□□□ -0.43
CBFB-209ENST00000568858 FIGNL2A6NMB9 653 aa12.35□□□□□ -0.43
CBFB-209ENST00000568858 WIPF1O43516 503 aa12.35□□□□□ -0.43
CBFB-209ENST00000568858 RAD21O60216 631 aa12.35□□□□□ -0.43
CBFB-209ENST00000568858 SOX11P35716 441 aa12.35□□□□□ -0.43
CBFB-209ENST00000568858 VEGFBP49765 207 aa12.35□□□□□ -0.43
CBFB-209ENST00000568858 SLFNL1Q499Z3 407 aa12.34□□□□□ -0.43
CBFB-209ENST00000568858 COG6Q9Y2V7 657 aa12.34□□□□□ -0.43
CBFB-209ENST00000568858 MYCP01106 439 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms