RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 COL18A1P39060 1754 aa20.26■□□□□ 0.83
CMTM3-215ENST00000568477 TMF1P82094 1093 aa20.26■□□□□ 0.83
CMTM3-215ENST00000568477 ZRANB1Q9UGI0 708 aa20.26■□□□□ 0.83
CMTM3-215ENST00000568477 PDE3BQ13370 1112 aa20.25■□□□□ 0.83
CMTM3-215ENST00000568477 USP54Q70EL1 1684 aa20.25■□□□□ 0.83
CMTM3-215ENST00000568477 BAG6P46379 1132 aa20.24■□□□□ 0.83
CMTM3-215ENST00000568477 TOM1L2Q6ZVM7 507 aa20.24■□□□□ 0.83
CMTM3-215ENST00000568477 AXIN2Q9Y2T1 843 aa20.24■□□□□ 0.83
CMTM3-215ENST00000568477 WDR17Q8IZU2 1322 aa20.24■□□□□ 0.83
CMTM3-215ENST00000568477 FAM196AQ6ZSG2 479 aa20.23■□□□□ 0.83
CMTM3-215ENST00000568477 ABCC6O95255 1503 aa20.22■□□□□ 0.83
CMTM3-215ENST00000568477 RGPD1P0DJD0 1748 aa20.22■□□□□ 0.83
CMTM3-215ENST00000568477 CCER1Q8TC90 406 aaPredicted RBP20.22■□□□□ 0.83
CMTM3-215ENST00000568477 CSB-PGBD3P0DP91 1061 aa20.21■□□□□ 0.83
CMTM3-215ENST00000568477 OVOS2A0A0J9YW53 1432 aa20.2■□□□□ 0.82
CMTM3-215ENST00000568477 OVOS2Q6IE36 1432 aa20.2■□□□□ 0.82
CMTM3-215ENST00000568477 PARP4Q9UKK3 1724 aaKnown RBP20.2■□□□□ 0.82
CMTM3-215ENST00000568477 CDCA8Q53HL2 280 aa20.2■□□□□ 0.82
CMTM3-215ENST00000568477 ANKRD36BQ8N2N9 1353 aa20.2■□□□□ 0.82
CMTM3-215ENST00000568477 CARD10Q9BWT7 1032 aa20.18■□□□□ 0.82
CMTM3-215ENST00000568477 RGPD5Q99666 1765 aa20.18■□□□□ 0.82
CMTM3-215ENST00000568477 TRIM37O94972 964 aa20.17■□□□□ 0.82
CMTM3-215ENST00000568477 CDCA7Q9BWT1 371 aaPredicted RBP20.17■□□□□ 0.82
CMTM3-215ENST00000568477 DISP2A7MBM2 1401 aa20.17■□□□□ 0.82
CMTM3-215ENST00000568477 TNS1Q9HBL0 1735 aaKnown RBP20.16■□□□□ 0.82
CMTM3-215ENST00000568477 C11orf95C9JLR9 678 aaPredicted RBP20.15■□□□□ 0.82
CMTM3-215ENST00000568477 EN1Q05925 392 aaPredicted RBP20.15■□□□□ 0.82
CMTM3-215ENST00000568477 DDB1Q16531 1140 aa20.15■□□□□ 0.82
CMTM3-215ENST00000568477 COG3Q96JB2 828 aa20.15■□□□□ 0.82
CMTM3-215ENST00000568477 LTN1O94822 1766 aa20.14■□□□□ 0.81
CMTM3-215ENST00000568477 LRRC37A3O60309 1634 aa20.14■□□□□ 0.81
CMTM3-215ENST00000568477 CCDC7Q96M83 1385 aa20.14■□□□□ 0.81
CMTM3-215ENST00000568477 WNK3Q9BYP7 1800 aa20.13■□□□□ 0.81
CMTM3-215ENST00000568477 OVOS2A0A0G2JMS6 1433 aa20.13■□□□□ 0.81
CMTM3-215ENST00000568477 ERBB3P21860 1342 aa20.13■□□□□ 0.81
CMTM3-215ENST00000568477 APBA3O96018 575 aa20.11■□□□□ 0.81
CMTM3-215ENST00000568477 NLRP2Q9NX02 1062 aa20.11■□□□□ 0.81
CMTM3-215ENST00000568477 ANKRD24Q8TF21 1146 aa20.1■□□□□ 0.81
CMTM3-215ENST00000568477 IP6K1Q92551 441 aa20.09■□□□□ 0.81
CMTM3-215ENST00000568477 PARD3Q8TEW0 1356 aa20.08■□□□□ 0.81
CMTM3-215ENST00000568477 PEAK1Q9H792 1746 aa20.08■□□□□ 0.81
CMTM3-215ENST00000568477 EZH2Q15910 746 aaKnown RBP20.08■□□□□ 0.81
CMTM3-215ENST00000568477 CAMKK2Q96RR4 588 aa20.08■□□□□ 0.81
CMTM3-215ENST00000568477 MAP3K19Q56UN5 1328 aa20.07■□□□□ 0.8
CMTM3-215ENST00000568477 EXOC5O00471 708 aa20.07■□□□□ 0.8
CMTM3-215ENST00000568477 FYB1O15117 783 aa20.07■□□□□ 0.8
CMTM3-215ENST00000568477 GGNBP2Q9H3C7 697 aa20.07■□□□□ 0.8
CMTM3-215ENST00000568477 MYOM1P52179 1685 aa20.07■□□□□ 0.8
CMTM3-215ENST00000568477 EIF4G2P78344 907 aaKnown RBP eCLIP20.06■□□□□ 0.8
CMTM3-215ENST00000568477 TNS2Q63HR2 1409 aa20.06■□□□□ 0.8
CMTM3-215ENST00000568477 MARCH10Q8NA82 808 aaPredicted RBP20.06■□□□□ 0.8
CMTM3-215ENST00000568477 AMPHP49418 695 aa20.05■□□□□ 0.8
CMTM3-215ENST00000568477 SRCAPQ6ZRS2 3230 aa20.04■□□□□ 0.8
CMTM3-215ENST00000568477 PSDA5PKW4 1024 aaPredicted RBP20.04■□□□□ 0.8
CMTM3-215ENST00000568477 LTV1Q96GA3 475 aaPredicted RBP20.04■□□□□ 0.8
CMTM3-215ENST00000568477 BCL9O00512 1426 aa20.03■□□□□ 0.8
CMTM3-215ENST00000568477 NSD3Q9BZ95 1437 aa20.03■□□□□ 0.8
CMTM3-215ENST00000568477 IL2RBP14784 551 aa20.03■□□□□ 0.8
CMTM3-215ENST00000568477 FBLN1P23142 703 aa20.03■□□□□ 0.8
CMTM3-215ENST00000568477 HOXC9P31274 260 aa20.03■□□□□ 0.8
CMTM3-215ENST00000568477 RTL1A6NKG5 1358 aa20.03■□□□□ 0.8
CMTM3-215ENST00000568477 KIF20BQ96Q89 1820 aa20.02■□□□□ 0.8
CMTM3-215ENST00000568477 HSPA5P11021 654 aaKnown RBP20.02■□□□□ 0.8
CMTM3-215ENST00000568477 POLR3GLQ9BT43 218 aa20.02■□□□□ 0.8
CMTM3-215ENST00000568477 CARD14Q9BXL6 1004 aa20.02■□□□□ 0.8
CMTM3-215ENST00000568477 FAM208AQ9UK61 1670 aaKnown RBP20.02■□□□□ 0.8
CMTM3-215ENST00000568477 RRS1Q15050 365 aaKnown RBP20.01■□□□□ 0.79
CMTM3-215ENST00000568477 BCL11BQ9C0K0 894 aaPredicted RBP20.01■□□□□ 0.79
CMTM3-215ENST00000568477 SBF2Q86WG5 1849 aa20.01■□□□□ 0.79
CMTM3-215ENST00000568477 R3HDM1Q15032 1099 aaKnown RBP20■□□□□ 0.79
CMTM3-215ENST00000568477 RREB1Q92766 1687 aa20■□□□□ 0.79
CMTM3-215ENST00000568477 CGNL1Q0VF96 1302 aa19.97■□□□□ 0.79
CMTM3-215ENST00000568477 NUP188Q5SRE5 1749 aa19.96■□□□□ 0.79
CMTM3-215ENST00000568477 SMG6Q86US8 1419 aaKnown RBP19.96■□□□□ 0.79
CMTM3-215ENST00000568477 PLSCR1O15162 318 aa19.96■□□□□ 0.79
CMTM3-215ENST00000568477 NBPF14Q5TI25 921 aa19.96■□□□□ 0.79
CMTM3-215ENST00000568477 PTF1AQ7RTS3 328 aa19.96■□□□□ 0.79
CMTM3-215ENST00000568477 RGPD3A6NKT7 1758 aaPredicted RBP19.95■□□□□ 0.78
CMTM3-215ENST00000568477 RGPD4Q7Z3J3 1758 aa19.95■□□□□ 0.78
CMTM3-215ENST00000568477 FLT4P35916 1363 aa19.95■□□□□ 0.78
CMTM3-215ENST00000568477 KIF24Q5T7B8 1368 aa19.95■□□□□ 0.78
CMTM3-215ENST00000568477 LRP5O75197 1615 aa19.94■□□□□ 0.78
CMTM3-215ENST00000568477 INSRP06213 1382 aa19.94■□□□□ 0.78
CMTM3-215ENST00000568477 NHSQ6T4R5 1651 aa19.91■□□□□ 0.78
CMTM3-215ENST00000568477 KCNQ2O43526 872 aa19.91■□□□□ 0.78
CMTM3-215ENST00000568477 HSP90AB2PQ58FF8 381 aa19.91■□□□□ 0.78
CMTM3-215ENST00000568477 ACSBG1Q96GR2 724 aa19.91■□□□□ 0.78
CMTM3-215ENST00000568477 RGPD2P0DJD1 1756 aa19.9■□□□□ 0.78
CMTM3-215ENST00000568477 NBPF6Q5VWK0 638 aa19.9■□□□□ 0.78
CMTM3-215ENST00000568477 DDX54Q8TDD1 881 aaKnown RBP19.9■□□□□ 0.78
CMTM3-215ENST00000568477 NBPF4Q96M43 638 aa19.9■□□□□ 0.78
CMTM3-215ENST00000568477 EMILIN1Q9Y6C2 1016 aa19.9■□□□□ 0.78
CMTM3-215ENST00000568477 MEGF6O75095 1541 aa19.89■□□□□ 0.77
CMTM3-215ENST00000568477 USHBP1Q8N6Y0 703 aa19.88■□□□□ 0.77
CMTM3-215ENST00000568477 ZCRB1Q8TBF4 217 aaKnown RBP19.88■□□□□ 0.77
CMTM3-215ENST00000568477 PANK3Q9H999 370 aa19.88■□□□□ 0.77
CMTM3-215ENST00000568477 KAT6BQ8WYB5 2073 aa19.87■□□□□ 0.77
CMTM3-215ENST00000568477 PPM1GO15355 546 aaPredicted RBP19.87■□□□□ 0.77
CMTM3-215ENST00000568477 RAPGEF4Q8WZA2 1011 aa19.87■□□□□ 0.77
CMTM3-215ENST00000568477 TXNRD1Q16881 649 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms