RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-215ENST00000566682 VPS72Q15906 364 aa18.9■□□□□ 0.62
SPG7-215ENST00000566682 ARHGEF25Q86VW2 580 aa18.9■□□□□ 0.62
SPG7-215ENST00000566682 COG3Q96JB2 828 aa18.9■□□□□ 0.62
SPG7-215ENST00000566682 GJD4Q96KN9 370 aaPredicted RBP18.9■□□□□ 0.62
SPG7-215ENST00000566682 GGNBP2Q9H3C7 697 aa18.9■□□□□ 0.62
SPG7-215ENST00000566682 PANK3Q9H999 370 aa18.9■□□□□ 0.62
SPG7-215ENST00000566682 NFAT5O94916 1531 aa18.9■□□□□ 0.62
SPG7-215ENST00000566682 CAMTA1Q9Y6Y1 1673 aa18.89■□□□□ 0.61
SPG7-215ENST00000566682 COL18A1P39060 1754 aa18.88■□□□□ 0.61
SPG7-215ENST00000566682 ZEB1P37275 1124 aaPredicted RBP18.88■□□□□ 0.61
SPG7-215ENST00000566682 CCDC9Q9Y3X0 531 aaKnown RBP18.88■□□□□ 0.61
SPG7-215ENST00000566682 LTN1O94822 1766 aa18.87■□□□□ 0.61
SPG7-215ENST00000566682 GLI3P10071 1580 aa18.87■□□□□ 0.61
SPG7-215ENST00000566682 WASHC2AQ641Q2 1341 aa18.87■□□□□ 0.61
SPG7-215ENST00000566682 AATKQ6ZMQ8 1374 aa18.87■□□□□ 0.61
SPG7-215ENST00000566682 CCDC7Q96M83 1385 aa18.87■□□□□ 0.61
SPG7-215ENST00000566682 RGPD5Q99666 1765 aa18.87■□□□□ 0.61
SPG7-215ENST00000566682 STRN4Q9NRL3 753 aa18.87■□□□□ 0.61
SPG7-215ENST00000566682 CDK12Q9NYV4 1490 aaPredicted RBP18.86■□□□□ 0.61
SPG7-215ENST00000566682 DSG3P32926 999 aa18.86■□□□□ 0.61
SPG7-215ENST00000566682 EVA1CP58658 441 aa18.86■□□□□ 0.61
SPG7-215ENST00000566682 CGNL1Q0VF96 1302 aa18.85■□□□□ 0.61
SPG7-215ENST00000566682 AXIN2Q9Y2T1 843 aa18.85■□□□□ 0.61
SPG7-215ENST00000566682 FBLN1P23142 703 aa18.84■□□□□ 0.61
SPG7-215ENST00000566682 RGS12O14924 1447 aa18.83■□□□□ 0.61
SPG7-215ENST00000566682 COL5A2P05997 1499 aaPredicted RBP18.83■□□□□ 0.6
SPG7-215ENST00000566682 SPATA31A5Q5VU36 1347 aa18.82■□□□□ 0.6
SPG7-215ENST00000566682 SPATA31A7Q8IWB4 1347 aa18.82■□□□□ 0.6
SPG7-215ENST00000566682 LARP1Q6PKG0 1096 aaKnown RBP18.81■□□□□ 0.6
SPG7-215ENST00000566682 SPATA31A1Q5TZJ5 1347 aa18.8■□□□□ 0.6
SPG7-215ENST00000566682 KNSTRNQ9Y448 316 aa18.8■□□□□ 0.6
SPG7-215ENST00000566682 ANKRD26Q9UPS8 1709 aa18.8■□□□□ 0.6
SPG7-215ENST00000566682 ABCC6O95255 1503 aa18.79■□□□□ 0.6
SPG7-215ENST00000566682 SOCS7O14512 581 aa18.79■□□□□ 0.6
SPG7-215ENST00000566682 ONECUT3O60422 494 aaPredicted RBP18.79■□□□□ 0.6
SPG7-215ENST00000566682 MAP3K19Q56UN5 1328 aa18.78■□□□□ 0.6
SPG7-215ENST00000566682 RRS1Q15050 365 aaKnown RBP18.78■□□□□ 0.6
SPG7-215ENST00000566682 FAM98CQ17RN3 349 aaKnown RBP18.78■□□□□ 0.6
SPG7-215ENST00000566682 USP35Q9P2H5 1018 aa18.78■□□□□ 0.6
SPG7-215ENST00000566682 PER1O15534 1290 aaPredicted RBP18.77■□□□□ 0.6
SPG7-215ENST00000566682 SEPT12Q8IYM1 358 aa18.77■□□□□ 0.6
SPG7-215ENST00000566682 IP6K1Q92551 441 aa18.77■□□□□ 0.6
SPG7-215ENST00000566682 MAP2P11137 1827 aaKnown RBP18.77■□□□□ 0.59
SPG7-215ENST00000566682 BRWD3Q6RI45 1802 aa18.77■□□□□ 0.59
SPG7-215ENST00000566682 WDR17Q8IZU2 1322 aa18.76■□□□□ 0.59
SPG7-215ENST00000566682 CRB1P82279 1406 aa18.76■□□□□ 0.59
SPG7-215ENST00000566682 AMPHP49418 695 aa18.76■□□□□ 0.59
SPG7-215ENST00000566682 TOM1L2Q6ZVM7 507 aa18.76■□□□□ 0.59
SPG7-215ENST00000566682 CSB-PGBD3P0DP91 1061 aa18.75■□□□□ 0.59
SPG7-215ENST00000566682 HOXC9P31274 260 aa18.75■□□□□ 0.59
SPG7-215ENST00000566682 NSD2O96028 1365 aa18.75■□□□□ 0.59
SPG7-215ENST00000566682 A0A0G2JS52 829 aa18.74■□□□□ 0.59
SPG7-215ENST00000566682 MYT1Q01538 1121 aa18.74■□□□□ 0.59
SPG7-215ENST00000566682 AMER1Q5JTC6 1135 aaPredicted RBP18.74■□□□□ 0.59
SPG7-215ENST00000566682 TCP11L2Q8N4U5 519 aa18.74■□□□□ 0.59
SPG7-215ENST00000566682 BLMP54132 1417 aaPredicted RBP18.74■□□□□ 0.59
SPG7-215ENST00000566682 ERBB3P21860 1342 aa18.74■□□□□ 0.59
SPG7-215ENST00000566682 BARGINQ6ZT62 677 aa18.73■□□□□ 0.59
SPG7-215ENST00000566682 ANKRD24Q8TF21 1146 aa18.73■□□□□ 0.59
SPG7-215ENST00000566682 THRAP3Q9Y2W1 955 aaKnown RBP18.73■□□□□ 0.59
SPG7-215ENST00000566682 TNNT2P45379 298 aaPredicted RBP18.72■□□□□ 0.59
SPG7-215ENST00000566682 EMILIN1Q9Y6C2 1016 aa18.72■□□□□ 0.59
SPG7-215ENST00000566682 THSD7AQ9UPZ6 1657 aa18.72■□□□□ 0.59
SPG7-215ENST00000566682 PEAK1Q9H792 1746 aa18.71■□□□□ 0.59
SPG7-215ENST00000566682 RTL1A6NKG5 1358 aa18.71■□□□□ 0.59
SPG7-215ENST00000566682 MORC1Q86VD1 984 aa18.71■□□□□ 0.59
SPG7-215ENST00000566682 LTV1Q96GA3 475 aaPredicted RBP18.71■□□□□ 0.59
SPG7-215ENST00000566682 CARD10Q9BWT7 1032 aa18.71■□□□□ 0.59
SPG7-215ENST00000566682 KIF24Q5T7B8 1368 aa18.69■□□□□ 0.58
SPG7-215ENST00000566682 NLRP2Q9NX02 1062 aa18.69■□□□□ 0.58
SPG7-215ENST00000566682 POLKQ9UBT6 870 aa18.69■□□□□ 0.58
SPG7-215ENST00000566682 FLT4P35916 1363 aa18.68■□□□□ 0.58
SPG7-215ENST00000566682 RGPD2P0DJD1 1756 aa18.68■□□□□ 0.58
SPG7-215ENST00000566682 PPM1GO15355 546 aaPredicted RBP18.68■□□□□ 0.58
SPG7-215ENST00000566682 HSP90AB2PQ58FF8 381 aa18.68■□□□□ 0.58
SPG7-215ENST00000566682 CC2D1BQ5T0F9 858 aaKnown RBP18.68■□□□□ 0.58
SPG7-215ENST00000566682 KRT27Q7Z3Y8 459 aa18.68■□□□□ 0.58
SPG7-215ENST00000566682 WNK3Q9BYP7 1800 aa18.67■□□□□ 0.58
SPG7-215ENST00000566682 FAM208AQ9UK61 1670 aaKnown RBP18.67■□□□□ 0.58
SPG7-215ENST00000566682 INSRP06213 1382 aa18.67■□□□□ 0.58
SPG7-215ENST00000566682 NPC1L1Q9UHC9 1359 aa18.66■□□□□ 0.58
SPG7-215ENST00000566682 PARP4Q9UKK3 1724 aaKnown RBP18.66■□□□□ 0.58
SPG7-215ENST00000566682 CNGB1Q14028 1251 aaPredicted RBP18.65■□□□□ 0.58
SPG7-215ENST00000566682 UPF1Q92900 1129 aaKnown RBP eCLIP18.64■□□□□ 0.57
SPG7-215ENST00000566682 CDCA7Q9BWT1 371 aaPredicted RBP18.63■□□□□ 0.57
SPG7-215ENST00000566682 SMG6Q86US8 1419 aaKnown RBP18.63■□□□□ 0.57
SPG7-215ENST00000566682 PDE3BQ13370 1112 aa18.62■□□□□ 0.57
SPG7-215ENST00000566682 FAM182BQ5T319 152 aa18.62■□□□□ 0.57
SPG7-215ENST00000566682 NBPF6Q5VWK0 638 aa18.62■□□□□ 0.57
SPG7-215ENST00000566682 NBPF4Q96M43 638 aa18.62■□□□□ 0.57
SPG7-215ENST00000566682 DISP2A7MBM2 1401 aa18.62■□□□□ 0.57
SPG7-215ENST00000566682 LRRC37A3O60309 1634 aa18.61■□□□□ 0.57
SPG7-215ENST00000566682 DDB1Q16531 1140 aa18.61■□□□□ 0.57
SPG7-215ENST00000566682 IL2RBP14784 551 aa18.6■□□□□ 0.57
SPG7-215ENST00000566682 DDX10Q13206 875 aaKnown RBP18.6■□□□□ 0.57
SPG7-215ENST00000566682 ZNF219Q9P2Y4 722 aaPredicted RBP18.59■□□□□ 0.57
SPG7-215ENST00000566682 EXOC5O00471 708 aa18.58■□□□□ 0.56
SPG7-215ENST00000566682 USHBP1Q8N6Y0 703 aa18.58■□□□□ 0.56
SPG7-215ENST00000566682 MTHFSP49914 203 aa18.57■□□□□ 0.56
SPG7-215ENST00000566682 EIF4A2Q14240 407 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms