RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 PTMSP20962 102 aa14.2□□□□□ -0.14
CDH1-210ENST00000566612 ZNF521Q96K83 1311 aa14.2□□□□□ -0.14
CDH1-210ENST00000566612 MCTP1Q6DN14 999 aa14.2□□□□□ -0.14
CDH1-210ENST00000566612 IL16Q14005 1332 aa14.2□□□□□ -0.14
CDH1-210ENST00000566612 YTHDC2Q9H6S0 1430 aaKnown RBP14.2□□□□□ -0.14
CDH1-210ENST00000566612 MSNP26038 577 aaKnown RBP14.19□□□□□ -0.14
CDH1-210ENST00000566612 UHRF1BP1LA0JNW5 1464 aa14.19□□□□□ -0.14
CDH1-210ENST00000566612 NEK4P51957 841 aa14.19□□□□□ -0.14
CDH1-210ENST00000566612 PRDM15P57071 1507 aaPredicted RBP14.19□□□□□ -0.14
CDH1-210ENST00000566612 TBC1D32Q96NH3 1257 aa14.19□□□□□ -0.14
CDH1-210ENST00000566612 DIAPH3Q9NSV4 1193 aa14.19□□□□□ -0.14
CDH1-210ENST00000566612 HDAC5Q9UQL6 1122 aa14.19□□□□□ -0.14
CDH1-210ENST00000566612 ZCCHC11Q5TAX3 1644 aaKnown RBP14.18□□□□□ -0.14
CDH1-210ENST00000566612 RIMS2Q9UQ26 1411 aa14.18□□□□□ -0.14
CDH1-210ENST00000566612 IL1RAPL2Q9NP60 686 aa14.18□□□□□ -0.14
CDH1-210ENST00000566612 PPIP5K1Q6PFW1 1433 aa14.18□□□□□ -0.14
CDH1-210ENST00000566612 POGZQ7Z3K3 1410 aa14.18□□□□□ -0.14
CDH1-210ENST00000566612 VAMP4O75379 141 aa14.17□□□□□ -0.14
CDH1-210ENST00000566612 MCM4P33991 863 aa14.17□□□□□ -0.14
CDH1-210ENST00000566612 CDC42BPBQ9Y5S2 1711 aa14.17□□□□□ -0.14
CDH1-210ENST00000566612 MAP4K4O95819 1239 aaPredicted RBP14.17□□□□□ -0.14
CDH1-210ENST00000566612 IFIT2P09913 472 aaKnown RBP14.17□□□□□ -0.14
CDH1-210ENST00000566612 CCT4P50991 539 aaKnown RBP14.17□□□□□ -0.14
CDH1-210ENST00000566612 HDAC1Q13547 482 aaPredicted RBP14.17□□□□□ -0.14
CDH1-210ENST00000566612 ZNF530Q6P9A1 599 aaPredicted RBP14.17□□□□□ -0.14
CDH1-210ENST00000566612 RPAP2Q8IXW5 612 aaPredicted RBP14.17□□□□□ -0.14
CDH1-210ENST00000566612 TRMT2AQ8IZ69 625 aaKnown RBP14.17□□□□□ -0.14
CDH1-210ENST00000566612 INSRP06213 1382 aa14.17□□□□□ -0.14
CDH1-210ENST00000566612 TRPM2O94759 1503 aa14.17□□□□□ -0.14
CDH1-210ENST00000566612 RSPH6AQ9H0K4 717 aa14.17□□□□□ -0.14
CDH1-210ENST00000566612 EIF4A2Q14240 407 aaKnown RBP14.16□□□□□ -0.14
CDH1-210ENST00000566612 RAPGEF4Q8WZA2 1011 aa14.16□□□□□ -0.14
CDH1-210ENST00000566612 PPP6R1Q9UPN7 881 aa14.16□□□□□ -0.14
CDH1-210ENST00000566612 TTC21BQ7Z4L5 1316 aa14.16□□□□□ -0.14
CDH1-210ENST00000566612 YEATS2Q9ULM3 1422 aa14.16□□□□□ -0.14
CDH1-210ENST00000566612 SKOR2Q2VWA4 1001 aaPredicted RBP14.16□□□□□ -0.14
CDH1-210ENST00000566612 NEXNQ0ZGT2 675 aa14.16□□□□□ -0.14
CDH1-210ENST00000566612 TTC5Q8N0Z6 440 aa14.15□□□□□ -0.14
CDH1-210ENST00000566612 CROCC2H7BZ55 1655 aa14.15□□□□□ -0.14
CDH1-210ENST00000566612 GNAT3A8MTJ3 354 aa14.15□□□□□ -0.14
CDH1-210ENST00000566612 MRPL50Q8N5N7 158 aaKnown RBP14.15□□□□□ -0.14
CDH1-210ENST00000566612 ZBTB40Q9NUA8 1239 aa14.15□□□□□ -0.14
CDH1-210ENST00000566612 FOXO3O43524 673 aa14.15□□□□□ -0.14
CDH1-210ENST00000566612 LRRCC1Q9C099 1032 aa14.15□□□□□ -0.14
CDH1-210ENST00000566612 K7ELQ4 463 aaPredicted RBP14.14□□□□□ -0.15
CDH1-210ENST00000566612 GORABQ5T7V8 394 aa14.14□□□□□ -0.15
CDH1-210ENST00000566612 PROSER2Q86WR7 435 aaPredicted RBP14.14□□□□□ -0.15
CDH1-210ENST00000566612 NUCB1Q02818 461 aa14.14□□□□□ -0.15
CDH1-210ENST00000566612 RIC3Q7Z5B4 369 aa14.14□□□□□ -0.15
CDH1-210ENST00000566612 RABEP1Q15276 862 aa14.14□□□□□ -0.15
CDH1-210ENST00000566612 TBC1D9Q6ZT07 1266 aa14.14□□□□□ -0.15
CDH1-210ENST00000566612 TRPM1Q7Z4N2 1603 aa14.14□□□□□ -0.15
CDH1-210ENST00000566612 NUCB2P80303 420 aa14.13□□□□□ -0.15
CDH1-210ENST00000566612 G3BP1Q13283 466 aaKnown RBP eCLIP14.13□□□□□ -0.15
CDH1-210ENST00000566612 PLEKHO1Q53GL0 409 aaPredicted RBP14.13□□□□□ -0.15
CDH1-210ENST00000566612 TSHZ3Q63HK5 1081 aa14.13□□□□□ -0.15
CDH1-210ENST00000566612 TNRQ92752 1358 aa14.13□□□□□ -0.15
CDH1-210ENST00000566612 SBNO2Q9Y2G9 1366 aa14.13□□□□□ -0.15
CDH1-210ENST00000566612 ZC3H6P61129 1189 aaKnown RBP14.13□□□□□ -0.15
CDH1-210ENST00000566612 ZRSR1Q15695 479 aaKnown RBP14.13□□□□□ -0.15
CDH1-210ENST00000566612 ANKLE2Q86XL3 938 aa14.13□□□□□ -0.15
CDH1-210ENST00000566612 C16orf71Q8IYS4 520 aaPredicted RBP14.13□□□□□ -0.15
CDH1-210ENST00000566612 MEIS3Q99687 375 aa14.13□□□□□ -0.15
CDH1-210ENST00000566612 SRCIN1Q9C0H9 1055 aa14.13□□□□□ -0.15
CDH1-210ENST00000566612 DDX58O95786 925 aaKnown RBP14.13□□□□□ -0.15
CDH1-210ENST00000566612 ZFYVE16Q7Z3T8 1539 aa14.13□□□□□ -0.15
CDH1-210ENST00000566612 IQGAP3Q86VI3 1631 aa14.12□□□□□ -0.15
CDH1-210ENST00000566612 ERC2O15083 957 aa14.12□□□□□ -0.15
CDH1-210ENST00000566612 SRGAP3O43295 1099 aa14.12□□□□□ -0.15
CDH1-210ENST00000566612 HSP90B1P14625 803 aaKnown RBP14.12□□□□□ -0.15
CDH1-210ENST00000566612 BMP2KLQ5H9B9 411 aa14.11□□□□□ -0.15
CDH1-210ENST00000566612 TAF7LQ5H9L4 462 aa14.11□□□□□ -0.15
CDH1-210ENST00000566612 CLASRPQ8N2M8 674 aaKnown RBP14.11□□□□□ -0.15
CDH1-210ENST00000566612 SYAP1Q96A49 352 aaPredicted RBP14.11□□□□□ -0.15
CDH1-210ENST00000566612 ZMYM3Q14202 1370 aa14.11□□□□□ -0.15
CDH1-210ENST00000566612 ATF3P18847 181 aa14.11□□□□□ -0.15
CDH1-210ENST00000566612 NUTM1Q86Y26 1132 aa14.11□□□□□ -0.15
CDH1-210ENST00000566612 SMC5Q8IY18 1101 aa14.1□□□□□ -0.15
CDH1-210ENST00000566612 KDM5AP29375 1690 aaKnown RBP14.1□□□□□ -0.15
CDH1-210ENST00000566612 IL13P35225 146 aa14.1□□□□□ -0.15
CDH1-210ENST00000566612 RBM42Q9BTD8 480 aaKnown RBP14.1□□□□□ -0.15
CDH1-210ENST00000566612 PLXNC1O60486 1568 aa14.1□□□□□ -0.15
CDH1-210ENST00000566612 PRPF40AO75400 957 aaKnown RBP14.1□□□□□ -0.15
CDH1-210ENST00000566612 CAVIN1Q6NZI2 390 aaKnown RBP14.1□□□□□ -0.15
CDH1-210ENST00000566612 RUFY2Q8WXA3 655 aa14.1□□□□□ -0.15
CDH1-210ENST00000566612 ARHGAP45Q92619 1136 aa14.1□□□□□ -0.15
CDH1-210ENST00000566612 BTBD11A6QL63 1104 aa14.09□□□□□ -0.15
CDH1-210ENST00000566612 ANXA1P04083 346 aa14.09□□□□□ -0.15
CDH1-210ENST00000566612 TAF7Q15545 349 aaPredicted RBP14.09□□□□□ -0.15
CDH1-210ENST00000566612 MPRIPQ6WCQ1 1025 aa14.09□□□□□ -0.15
CDH1-210ENST00000566612 FLIIQ13045 1269 aa14.09□□□□□ -0.15
CDH1-210ENST00000566612 SIL1Q9H173 461 aa14.09□□□□□ -0.15
CDH1-210ENST00000566612 PHF8Q9UPP1 1060 aa14.09□□□□□ -0.15
CDH1-210ENST00000566612 HSP90AB4PQ58FF6 505 aa14.09□□□□□ -0.15
CDH1-210ENST00000566612 CLTCL1P53675 1640 aa14.09□□□□□ -0.15
CDH1-210ENST00000566612 MYL6BP14649 208 aa14.09□□□□□ -0.15
CDH1-210ENST00000566612 ZKSCAN1P17029 563 aaPredicted RBP14.09□□□□□ -0.15
CDH1-210ENST00000566612 LRRFIP2Q9Y608 721 aaKnown RBP14.09□□□□□ -0.15
CDH1-210ENST00000566612 UNC13BO14795 1591 aa14.08□□□□□ -0.16
CDH1-210ENST00000566612 ZBTB7BO15156 539 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms