RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 MAPK8IP3Q9UPT6 1336 aa12.99□□□□□ -0.33
SF3B3-207ENST00000566095 ARHGEF25Q86VW2 580 aa12.99□□□□□ -0.33
SF3B3-207ENST00000566095 COL22A1Q8NFW1 1626 aaPredicted RBP12.99□□□□□ -0.33
SF3B3-207ENST00000566095 COL3A1P02461 1466 aaPredicted RBP12.98□□□□□ -0.33
SF3B3-207ENST00000566095 JCADQ9P266 1359 aa12.98□□□□□ -0.33
SF3B3-207ENST00000566095 ZBTB7CA1YPR0 619 aa12.98□□□□□ -0.33
SF3B3-207ENST00000566095 FCHSD2O94868 740 aa12.98□□□□□ -0.33
SF3B3-207ENST00000566095 HNRNPUQ00839 825 aaKnown RBP eCLIP12.98□□□□□ -0.33
SF3B3-207ENST00000566095 FBXO41Q8TF61 875 aa12.98□□□□□ -0.33
SF3B3-207ENST00000566095 PRDM11Q9NQV5 511 aa12.98□□□□□ -0.33
SF3B3-207ENST00000566095 LTN1O94822 1766 aa12.98□□□□□ -0.33
SF3B3-207ENST00000566095 COL16A1Q07092 1604 aaPredicted RBP12.98□□□□□ -0.33
SF3B3-207ENST00000566095 ADAMTS8Q9UP79 889 aa12.97□□□□□ -0.33
SF3B3-207ENST00000566095 IL13P35225 146 aa12.96□□□□□ -0.33
SF3B3-207ENST00000566095 ILDR2Q71H61 639 aa12.96□□□□□ -0.33
SF3B3-207ENST00000566095 RUNDC1Q96C34 613 aa12.96□□□□□ -0.33
SF3B3-207ENST00000566095 SPATA31A6Q5VVP1 1343 aa12.95□□□□□ -0.34
SF3B3-207ENST00000566095 ZC3H6P61129 1189 aaKnown RBP12.95□□□□□ -0.34
SF3B3-207ENST00000566095 EIF4A2Q14240 407 aaKnown RBP12.95□□□□□ -0.34
SF3B3-207ENST00000566095 HSP90AB2PQ58FF8 381 aa12.95□□□□□ -0.34
SF3B3-207ENST00000566095 CRYBG1Q9Y4K1 1723 aa12.95□□□□□ -0.34
SF3B3-207ENST00000566095 SHPRHQ149N8 1683 aa12.95□□□□□ -0.34
SF3B3-207ENST00000566095 FAM208AQ9UK61 1670 aaKnown RBP12.94□□□□□ -0.34
SF3B3-207ENST00000566095 PLEKHG5O94827 1062 aa12.94□□□□□ -0.34
SF3B3-207ENST00000566095 KIAA0232Q92628 1395 aa12.94□□□□□ -0.34
SF3B3-207ENST00000566095 PLEKHG2Q9H7P9 1386 aa12.94□□□□□ -0.34
SF3B3-207ENST00000566095 PEAK1Q9H792 1746 aa12.93□□□□□ -0.34
SF3B3-207ENST00000566095 CSB-PGBD3P0DP91 1061 aa12.93□□□□□ -0.34
SF3B3-207ENST00000566095 FBLN1P23142 703 aa12.93□□□□□ -0.34
SF3B3-207ENST00000566095 LMOD3Q0VAK6 560 aa12.93□□□□□ -0.34
SF3B3-207ENST00000566095 CABLES1Q8TDN4 633 aa12.93□□□□□ -0.34
SF3B3-207ENST00000566095 ABCA3Q99758 1704 aa12.93□□□□□ -0.34
SF3B3-207ENST00000566095 ANKRD24Q8TF21 1146 aa12.92□□□□□ -0.34
SF3B3-207ENST00000566095 IGSF1Q8N6C5 1336 aa12.91□□□□□ -0.34
SF3B3-207ENST00000566095 EVA1CP58658 441 aa12.91□□□□□ -0.34
SF3B3-207ENST00000566095 ERICH6BQ5W0A0 696 aa12.91□□□□□ -0.34
SF3B3-207ENST00000566095 LTV1Q96GA3 475 aaPredicted RBP12.91□□□□□ -0.34
SF3B3-207ENST00000566095 ERBB3P21860 1342 aa12.9□□□□□ -0.34
SF3B3-207ENST00000566095 COL14A1Q05707 1796 aaKnown RBP12.9□□□□□ -0.34
SF3B3-207ENST00000566095 CALD1Q05682 793 aaKnown RBP12.9□□□□□ -0.34
SF3B3-207ENST00000566095 SULT6B1Q6IMI4 303 aa12.9□□□□□ -0.34
SF3B3-207ENST00000566095 PRKAR2BP31323 418 aa12.89□□□□□ -0.35
SF3B3-207ENST00000566095 GAS2L2Q8NHY3 880 aa12.89□□□□□ -0.35
SF3B3-207ENST00000566095 EYA1Q99502 592 aa12.89□□□□□ -0.35
SF3B3-207ENST00000566095 RSPH6AQ9H0K4 717 aa12.89□□□□□ -0.35
SF3B3-207ENST00000566095 KDRP35968 1356 aa12.89□□□□□ -0.35
SF3B3-207ENST00000566095 CCDC27Q2M243 656 aa12.88□□□□□ -0.35
SF3B3-207ENST00000566095 CCDC146Q8IYE0 955 aa12.88□□□□□ -0.35
SF3B3-207ENST00000566095 RAPGEF4Q8WZA2 1011 aa12.88□□□□□ -0.35
SF3B3-207ENST00000566095 NLRP2Q9NX02 1062 aa12.88□□□□□ -0.35
SF3B3-207ENST00000566095 RGPD1P0DJD0 1748 aa12.88□□□□□ -0.35
SF3B3-207ENST00000566095 WDR17Q8IZU2 1322 aa12.88□□□□□ -0.35
SF3B3-207ENST00000566095 APAF1O14727 1248 aa12.87□□□□□ -0.35
SF3B3-207ENST00000566095 HMOX1P09601 288 aa12.87□□□□□ -0.35
SF3B3-207ENST00000566095 CHRNA2Q15822 529 aa12.87□□□□□ -0.35
SF3B3-207ENST00000566095 AMOTQ4VCS5 1084 aa12.87□□□□□ -0.35
SF3B3-207ENST00000566095 TCP11L2Q8N4U5 519 aa12.87□□□□□ -0.35
SF3B3-207ENST00000566095 NUTM2BA6NNL0 878 aaPredicted RBP12.86□□□□□ -0.35
SF3B3-207ENST00000566095 NUTM2EB1AL46 878 aaPredicted RBP12.86□□□□□ -0.35
SF3B3-207ENST00000566095 NFE2L2Q16236 605 aa12.86□□□□□ -0.35
SF3B3-207ENST00000566095 MEX3CQ5U5Q3 659 aaKnown RBP12.86□□□□□ -0.35
SF3B3-207ENST00000566095 TOM1L2Q6ZVM7 507 aa12.86□□□□□ -0.35
SF3B3-207ENST00000566095 NUTM2AQ8IVF1 878 aaPredicted RBP12.86□□□□□ -0.35
SF3B3-207ENST00000566095 PLEKHF1Q96S99 279 aa12.86□□□□□ -0.35
SF3B3-207ENST00000566095 COL18A1P39060 1754 aa12.86□□□□□ -0.35
SF3B3-207ENST00000566095 LMO7Q8WWI1 1683 aa12.86□□□□□ -0.35
SF3B3-207ENST00000566095 COL5A2P05997 1499 aaPredicted RBP12.85□□□□□ -0.35
SF3B3-207ENST00000566095 TATP17735 454 aaPredicted RBP12.85□□□□□ -0.35
SF3B3-207ENST00000566095 HSPA1LP34931 641 aa12.85□□□□□ -0.35
SF3B3-207ENST00000566095 PLEKHO1Q53GL0 409 aaPredicted RBP12.85□□□□□ -0.35
SF3B3-207ENST00000566095 AXIN2Q9Y2T1 843 aa12.85□□□□□ -0.35
SF3B3-207ENST00000566095 CAMTA1Q9Y6Y1 1673 aa12.85□□□□□ -0.35
SF3B3-207ENST00000566095 NCAPD2Q15021 1401 aa12.85□□□□□ -0.35
SF3B3-207ENST00000566095 ZNF521Q96K83 1311 aa12.85□□□□□ -0.35
SF3B3-207ENST00000566095 FAM83GA6ND36 823 aa12.84□□□□□ -0.35
SF3B3-207ENST00000566095 HTATSF1O43719 755 aaKnown RBP12.84□□□□□ -0.35
SF3B3-207ENST00000566095 ADAMTS2O95450 1211 aa12.84□□□□□ -0.35
SF3B3-207ENST00000566095 TMPOP42166 694 aaKnown RBP12.84□□□□□ -0.35
SF3B3-207ENST00000566095 NBPF6Q5VWK0 638 aa12.84□□□□□ -0.35
SF3B3-207ENST00000566095 WDR63Q8IWG1 891 aa12.84□□□□□ -0.35
SF3B3-207ENST00000566095 RTF1Q92541 710 aaKnown RBP12.84□□□□□ -0.35
SF3B3-207ENST00000566095 NBPF4Q96M43 638 aa12.84□□□□□ -0.35
SF3B3-207ENST00000566095 PHF23Q9BUL5 403 aaPredicted RBP12.84□□□□□ -0.35
SF3B3-207ENST00000566095 CDCA7Q9BWT1 371 aaPredicted RBP12.84□□□□□ -0.35
SF3B3-207ENST00000566095 CARD10Q9BWT7 1032 aa12.84□□□□□ -0.35
SF3B3-207ENST00000566095 BTG4Q9NY30 223 aa12.84□□□□□ -0.35
SF3B3-207ENST00000566095 CRB1P82279 1406 aa12.84□□□□□ -0.35
SF3B3-207ENST00000566095 NWD2Q9ULI1 1742 aa12.83□□□□□ -0.36
SF3B3-207ENST00000566095 RIPK4P57078 832 aa12.83□□□□□ -0.36
SF3B3-207ENST00000566095 GOLGA2Q08379 1002 aa12.83□□□□□ -0.36
SF3B3-207ENST00000566095 C1orf141Q5JVX7 400 aa12.83□□□□□ -0.36
SF3B3-207ENST00000566095 STRN4Q9NRL3 753 aa12.83□□□□□ -0.36
SF3B3-207ENST00000566095 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.83□□□□□ -0.364e-6■□□□□ 10.6
SF3B3-207ENST00000566095 SPG7Q9UQ90 795 aa12.83□□□□□ -0.36
SF3B3-207ENST00000566095 NGLY1Q96IV0 654 aa12.82□□□□□ -0.36
SF3B3-207ENST00000566095 THRAP3Q9Y2W1 955 aaKnown RBP12.82□□□□□ -0.36
SF3B3-207ENST00000566095 E9PSI1 815 aa12.81□□□□□ -0.36
SF3B3-207ENST00000566095 HSP90AB1P08238 724 aaKnown RBP12.81□□□□□ -0.36
SF3B3-207ENST00000566095 NEUROD2Q15784 382 aa12.81□□□□□ -0.36
SF3B3-207ENST00000566095 AEBP1Q8IUX7 1158 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms