RNA–Protein interactions for RNA: ENST00000565298.5

IFT140-206, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 4,727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-206ENST00000565298 BECN2A8MW95 431 aa23.06■■□□□ 1.28
IFT140-206ENST00000565298 MSH6P52701 1360 aa23.06■■□□□ 1.28
IFT140-206ENST00000565298 XBP1P17861 261 aa23.05■■□□□ 1.28
IFT140-206ENST00000565298 PES1O00541 588 aaKnown RBP23.05■■□□□ 1.28
IFT140-206ENST00000565298 TTC39AQ5SRH9 613 aa23.05■■□□□ 1.28
IFT140-206ENST00000565298 CEP126Q9P2H0 1117 aa23.05■■□□□ 1.28
IFT140-206ENST00000565298 NUP153P49790 1475 aaKnown RBP23.05■■□□□ 1.28
IFT140-206ENST00000565298 C22orf23Q9BZE7 217 aa23.04■■□□□ 1.28
IFT140-206ENST00000565298 GOLGA6L19H0YKK7 550 aa23.04■■□□□ 1.28
IFT140-206ENST00000565298 TOM1O60784 492 aa23.04■■□□□ 1.28
IFT140-206ENST00000565298 TPM2P07951 284 aa23.04■■□□□ 1.28
IFT140-206ENST00000565298 HOOK1Q9UJC3 728 aaKnown RBP23.04■■□□□ 1.28
IFT140-206ENST00000565298 ABCC11Q96J66 1382 aa23.04■■□□□ 1.28
IFT140-206ENST00000565298 PTCD1O75127 700 aaKnown RBP23.04■■□□□ 1.28
IFT140-206ENST00000565298 TSR1Q2NL82 804 aaKnown RBP23.04■■□□□ 1.28
IFT140-206ENST00000565298 FOXD4L6Q3SYB3 417 aaPredicted RBP23.04■■□□□ 1.28
IFT140-206ENST00000565298 FOXD4L3Q6VB84 417 aaPredicted RBP23.04■■□□□ 1.28
IFT140-206ENST00000565298 CCDC43Q96MW1 224 aaKnown RBP23.04■■□□□ 1.28
IFT140-206ENST00000565298 VPS37CA5D8V6 355 aaPredicted RBP23.03■■□□□ 1.28
IFT140-206ENST00000565298 EXOC5O00471 708 aa23.03■■□□□ 1.28
IFT140-206ENST00000565298 TAF7Q15545 349 aaPredicted RBP23.03■■□□□ 1.28
IFT140-206ENST00000565298 NSD2O96028 1365 aa23.03■■□□□ 1.28
IFT140-206ENST00000565298 RPRD2Q5VT52 1461 aaKnown RBP23.03■■□□□ 1.28
IFT140-206ENST00000565298 TTC21BQ7Z4L5 1316 aa23.03■■□□□ 1.28
IFT140-206ENST00000565298 TPM3P06753 285 aa23.03■■□□□ 1.28
IFT140-206ENST00000565298 BRMS1Q9HCU9 246 aa23.03■■□□□ 1.28
IFT140-206ENST00000565298 NUCB2P80303 420 aa23.02■■□□□ 1.28
IFT140-206ENST00000565298 SAMD1Q6SPF0 538 aaPredicted RBP23.02■■□□□ 1.28
IFT140-206ENST00000565298 LRRCC1Q9C099 1032 aa23.02■■□□□ 1.28
IFT140-206ENST00000565298 ABCC10Q5T3U5 1492 aa23.02■■□□□ 1.28
IFT140-206ENST00000565298 DUOX2Q9NRD8 1548 aa23.02■■□□□ 1.28
IFT140-206ENST00000565298 BCAR3O75815 825 aa23.01■■□□□ 1.27
IFT140-206ENST00000565298 UGGT2Q9NYU1 1516 aa23.01■■□□□ 1.27
IFT140-206ENST00000565298 EMILIN1Q9Y6C2 1016 aa23.01■■□□□ 1.27
IFT140-206ENST00000565298 WDR97A6NE52 1622 aa23.01■■□□□ 1.27
IFT140-206ENST00000565298 NACAP1Q9BZK3 213 aa23■■□□□ 1.27
IFT140-206ENST00000565298 IKQ13123 557 aaPredicted RBP23■■□□□ 1.27
IFT140-206ENST00000565298 C1orf115Q9H7X2 142 aa23■■□□□ 1.27
IFT140-206ENST00000565298 CHMP5Q9NZZ3 219 aa23■■□□□ 1.27
IFT140-206ENST00000565298 SRGAP3O43295 1099 aa23■■□□□ 1.27
IFT140-206ENST00000565298 TPM1P09493 284 aa23■■□□□ 1.27
IFT140-206ENST00000565298 DUSP27Q5VZP5 1158 aa22.99■■□□□ 1.27
IFT140-206ENST00000565298 ZSCAN25Q6NSZ9 544 aa22.99■■□□□ 1.27
IFT140-206ENST00000565298 NPHP3Q7Z494 1330 aa22.99■■□□□ 1.27
IFT140-206ENST00000565298 LARP1Q6PKG0 1096 aaKnown RBP22.99■■□□□ 1.27
IFT140-206ENST00000565298 BICD2Q8TD16 824 aa22.99■■□□□ 1.27
IFT140-206ENST00000565298 MVPQ14764 893 aaKnown RBP22.99■■□□□ 1.27
IFT140-206ENST00000565298 RPAP2Q8IXW5 612 aaPredicted RBP22.99■■□□□ 1.27
IFT140-206ENST00000565298 SIL1Q9H173 461 aa22.99■■□□□ 1.27
IFT140-206ENST00000565298 IFT57Q9NWB7 429 aa22.98■■□□□ 1.27
IFT140-206ENST00000565298 ACEP12821 1306 aa22.98■■□□□ 1.27
IFT140-206ENST00000565298 ANKRD20A12PQ8NF67 263 aa22.98■■□□□ 1.27
IFT140-206ENST00000565298 IGHMBP2P38935 993 aaKnown RBP22.98■■□□□ 1.27
IFT140-206ENST00000565298 PDZRN3Q9UPQ7 1066 aa22.97■■□□□ 1.27
IFT140-206ENST00000565298 DEKP35659 375 aaKnown RBP22.97■■□□□ 1.27
IFT140-206ENST00000565298 MCM10Q7L590 875 aa22.97■■□□□ 1.27
IFT140-206ENST00000565298 ZPR1O75312 459 aa22.97■■□□□ 1.27
IFT140-206ENST00000565298 ADAMTS12P58397 1594 aa22.96■■□□□ 1.27
IFT140-206ENST00000565298 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.96■■□□□ 1.27
IFT140-206ENST00000565298 HSP90AB3PQ58FF7 597 aa22.95■■□□□ 1.26
IFT140-206ENST00000565298 NOC3LQ8WTT2 800 aaKnown RBP22.95■■□□□ 1.26
IFT140-206ENST00000565298 SLC4A3P48751 1232 aa22.95■■□□□ 1.26
IFT140-206ENST00000565298 MCM2P49736 904 aa22.95■■□□□ 1.26
IFT140-206ENST00000565298 MPRIPQ6WCQ1 1025 aa22.95■■□□□ 1.26
IFT140-206ENST00000565298 USHBP1Q8N6Y0 703 aa22.95■■□□□ 1.26
IFT140-206ENST00000565298 BICDL1Q6ZP65 573 aa22.94■■□□□ 1.26
IFT140-206ENST00000565298 UBAP1LF5GYI3 381 aa22.94■■□□□ 1.26
IFT140-206ENST00000565298 TTC21AQ8NDW8 1320 aa22.94■■□□□ 1.26
IFT140-206ENST00000565298 IFNL2Q8IZJ0 200 aa22.94■■□□□ 1.26
IFT140-206ENST00000565298 AMER1Q5JTC6 1135 aaPredicted RBP22.94■■□□□ 1.26
IFT140-206ENST00000565298 CCDC73Q6ZRK6 1079 aa22.93■■□□□ 1.26
IFT140-206ENST00000565298 SLFN5Q08AF3 891 aa22.93■■□□□ 1.26
IFT140-206ENST00000565298 TEX13AQ9BXU3 409 aaPredicted RBP22.93■■□□□ 1.26
IFT140-206ENST00000565298 SYCP2Q9BX26 1530 aa22.93■■□□□ 1.26
IFT140-206ENST00000565298 FMNL2Q96PY5 1086 aa22.92■■□□□ 1.26
IFT140-206ENST00000565298 THUMPD2Q9BTF0 503 aaKnown RBP22.92■■□□□ 1.26
IFT140-206ENST00000565298 TRAPPC8Q9Y2L5 1435 aa22.92■■□□□ 1.26
IFT140-206ENST00000565298 ABCC2Q92887 1545 aa22.92■■□□□ 1.26
IFT140-206ENST00000565298 PDCP20941 246 aa22.92■■□□□ 1.26
IFT140-206ENST00000565298 RIMS2Q9UQ26 1411 aa22.91■■□□□ 1.26
IFT140-206ENST00000565298 MTMR7Q9Y216 660 aa22.91■■□□□ 1.26
IFT140-206ENST00000565298 ITSN2Q9NZM3 1697 aa22.91■■□□□ 1.26
IFT140-206ENST00000565298 RRP12Q5JTH9 1297 aaKnown RBP22.9■■□□□ 1.26
IFT140-206ENST00000565298 CCAR1Q8IX12 1150 aaKnown RBP22.9■■□□□ 1.26
IFT140-206ENST00000565298 RTN4Q9NQC3 1192 aaKnown RBP22.9■■□□□ 1.26
IFT140-206ENST00000565298 MIS18AQ9NYP9 233 aa22.9■■□□□ 1.26
IFT140-206ENST00000565298 KIAA0556O60303 1618 aa22.9■■□□□ 1.26
IFT140-206ENST00000565298 AACSQ86V21 672 aa22.9■■□□□ 1.26
IFT140-206ENST00000565298 DBF4Q9UBU7 674 aaPredicted RBP22.89■■□□□ 1.26
IFT140-206ENST00000565298 NUP160Q12769 1436 aa22.89■■□□□ 1.25
IFT140-206ENST00000565298 ALDH1L2Q3SY69 923 aa22.89■■□□□ 1.25
IFT140-206ENST00000565298 DCTN1Q14203 1278 aa22.89■■□□□ 1.25
IFT140-206ENST00000565298 C19orf44Q9H6X5 657 aa22.88■■□□□ 1.25
IFT140-206ENST00000565298 NEK4P51957 841 aa22.88■■□□□ 1.25
IFT140-206ENST00000565298 ANKRD36BQ8N2N9 1353 aa22.88■■□□□ 1.25
IFT140-206ENST00000565298 IPO7O95373 1038 aaKnown RBP22.87■■□□□ 1.25
IFT140-206ENST00000565298 FKBP4Q02790 459 aaKnown RBP eCLIP22.87■■□□□ 1.25
IFT140-206ENST00000565298 ANKRD24Q8TF21 1146 aa22.87■■□□□ 1.25
IFT140-206ENST00000565298 HYPKQ9NX55 129 aa22.87■■□□□ 1.25
IFT140-206ENST00000565298 RABEP1Q15276 862 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms