RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 AXIN2Q9Y2T1 843 aa25.53■■□□□ 1.68
SYNGR3-204ENST00000564642 RGPD5Q99666 1765 aa25.53■■□□□ 1.68
SYNGR3-204ENST00000564642 HSPA5P11021 654 aaKnown RBP25.52■■□□□ 1.68
SYNGR3-204ENST00000564642 BARGINQ6ZT62 677 aa25.52■■□□□ 1.68
SYNGR3-204ENST00000564642 THRAP3Q9Y2W1 955 aaKnown RBP25.52■■□□□ 1.68
SYNGR3-204ENST00000564642 THSD7AQ9UPZ6 1657 aa25.52■■□□□ 1.68
SYNGR3-204ENST00000564642 TOM1L2Q6ZVM7 507 aa25.51■■□□□ 1.67
SYNGR3-204ENST00000564642 CRB1P82279 1406 aa25.51■■□□□ 1.67
SYNGR3-204ENST00000564642 COG3Q96JB2 828 aa25.5■■□□□ 1.67
SYNGR3-204ENST00000564642 CSB-PGBD3P0DP91 1061 aa25.49■■□□□ 1.67
SYNGR3-204ENST00000564642 POLR3GLQ9BT43 218 aa25.49■■□□□ 1.67
SYNGR3-204ENST00000564642 LTN1O94822 1766 aa25.49■■□□□ 1.67
SYNGR3-204ENST00000564642 OVOS2A0A0J9YW53 1432 aa25.48■■□□□ 1.67
SYNGR3-204ENST00000564642 OVOS2Q6IE36 1432 aa25.48■■□□□ 1.67
SYNGR3-204ENST00000564642 WDR17Q8IZU2 1322 aa25.47■■□□□ 1.67
SYNGR3-204ENST00000564642 SF3B2Q13435 895 aaKnown RBP25.47■■□□□ 1.67
SYNGR3-204ENST00000564642 ABCC6O95255 1503 aa25.46■■□□□ 1.67
SYNGR3-204ENST00000564642 BLMP54132 1417 aaPredicted RBP25.46■■□□□ 1.67
SYNGR3-204ENST00000564642 MYOM1P52179 1685 aa25.45■■□□□ 1.67
SYNGR3-204ENST00000564642 PDE3BQ13370 1112 aa25.44■■□□□ 1.66
SYNGR3-204ENST00000564642 FAM182BQ5T319 152 aa25.44■■□□□ 1.66
SYNGR3-204ENST00000564642 FYB1O15117 783 aa25.43■■□□□ 1.66
SYNGR3-204ENST00000564642 GGNBP2Q9H3C7 697 aa25.42■■□□□ 1.66
SYNGR3-204ENST00000564642 KIF20BQ96Q89 1820 aa25.4■■□□□ 1.66
SYNGR3-204ENST00000564642 CARD10Q9BWT7 1032 aa25.4■■□□□ 1.66
SYNGR3-204ENST00000564642 CARD14Q9BXL6 1004 aa25.4■■□□□ 1.66
SYNGR3-204ENST00000564642 EP400Q96L91 3159 aa25.39■■□□□ 1.66
SYNGR3-204ENST00000564642 FAM196AQ6ZSG2 479 aa25.39■■□□□ 1.66
SYNGR3-204ENST00000564642 PARP4Q9UKK3 1724 aaKnown RBP25.38■■□□□ 1.65
SYNGR3-204ENST00000564642 NSD3Q9BZ95 1437 aa25.37■■□□□ 1.65
SYNGR3-204ENST00000564642 IP6K1Q92551 441 aa25.37■■□□□ 1.65
SYNGR3-204ENST00000564642 CDCA7Q9BWT1 371 aaPredicted RBP25.37■■□□□ 1.65
SYNGR3-204ENST00000564642 ERBB3P21860 1342 aa25.37■■□□□ 1.65
SYNGR3-204ENST00000564642 AMPHP49418 695 aa25.36■■□□□ 1.65
SYNGR3-204ENST00000564642 ANKRD24Q8TF21 1146 aa25.36■■□□□ 1.65
SYNGR3-204ENST00000564642 NLRP2Q9NX02 1062 aa25.36■■□□□ 1.65
SYNGR3-204ENST00000564642 CCDC7Q96M83 1385 aa25.35■■□□□ 1.65
SYNGR3-204ENST00000564642 FBLN1P23142 703 aa25.35■■□□□ 1.65
SYNGR3-204ENST00000564642 DDB1Q16531 1140 aa25.35■■□□□ 1.65
SYNGR3-204ENST00000564642 WNK3Q9BYP7 1800 aa25.35■■□□□ 1.65
SYNGR3-204ENST00000564642 MAP3K19Q56UN5 1328 aa25.35■■□□□ 1.65
SYNGR3-204ENST00000564642 DEFB132Q7Z7B7 95 aa25.34■■□□□ 1.65
SYNGR3-204ENST00000564642 RGPD1P0DJD0 1748 aa25.34■■□□□ 1.65
SYNGR3-204ENST00000564642 BAG6P46379 1132 aa25.33■■□□□ 1.65
SYNGR3-204ENST00000564642 LTV1Q96GA3 475 aaPredicted RBP25.32■■□□□ 1.64
SYNGR3-204ENST00000564642 HOXC9P31274 260 aa25.31■■□□□ 1.64
SYNGR3-204ENST00000564642 RRS1Q15050 365 aaKnown RBP25.31■■□□□ 1.64
SYNGR3-204ENST00000564642 CGNL1Q0VF96 1302 aa25.31■■□□□ 1.64
SYNGR3-204ENST00000564642 LRRC37A3O60309 1634 aa25.3■■□□□ 1.64
SYNGR3-204ENST00000564642 C11orf95C9JLR9 678 aaPredicted RBP25.3■■□□□ 1.64
SYNGR3-204ENST00000564642 TRIM37O94972 964 aa25.3■■□□□ 1.64
SYNGR3-204ENST00000564642 EXOC5O00471 708 aa25.29■■□□□ 1.64
SYNGR3-204ENST00000564642 PANK3Q9H999 370 aa25.29■■□□□ 1.64
SYNGR3-204ENST00000564642 RTL1A6NKG5 1358 aa25.27■■□□□ 1.64
SYNGR3-204ENST00000564642 FAM208AQ9UK61 1670 aaKnown RBP25.26■■□□□ 1.63
SYNGR3-204ENST00000564642 DISP2A7MBM2 1401 aa25.26■■□□□ 1.63
SYNGR3-204ENST00000564642 IL2RBP14784 551 aa25.25■■□□□ 1.63
SYNGR3-204ENST00000564642 OVOS2A0A0G2JMS6 1433 aa25.25■■□□□ 1.63
SYNGR3-204ENST00000564642 TNS1Q9HBL0 1735 aaKnown RBP25.25■■□□□ 1.63
SYNGR3-204ENST00000564642 EN1Q05925 392 aaPredicted RBP25.24■■□□□ 1.63
SYNGR3-204ENST00000564642 APBA3O96018 575 aa25.23■■□□□ 1.63
SYNGR3-204ENST00000564642 MARCH10Q8NA82 808 aaPredicted RBP25.22■■□□□ 1.63
SYNGR3-204ENST00000564642 PEAK1Q9H792 1746 aa25.2■■□□□ 1.63
SYNGR3-204ENST00000564642 FLT4P35916 1363 aa25.2■■□□□ 1.63
SYNGR3-204ENST00000564642 KIF24Q5T7B8 1368 aa25.2■■□□□ 1.63
SYNGR3-204ENST00000564642 KIF7Q2M1P5 1343 aa25.2■■□□□ 1.62
SYNGR3-204ENST00000564642 MAP2P11137 1827 aaKnown RBP25.2■■□□□ 1.62
SYNGR3-204ENST00000564642 RGPD2P0DJD1 1756 aa25.2■■□□□ 1.62
SYNGR3-204ENST00000564642 SMG6Q86US8 1419 aaKnown RBP25.2■■□□□ 1.62
SYNGR3-204ENST00000564642 PPM1GO15355 546 aaPredicted RBP25.19■■□□□ 1.62
SYNGR3-204ENST00000564642 HSP90AB2PQ58FF8 381 aa25.19■■□□□ 1.62
SYNGR3-204ENST00000564642 ANKRD26Q9UPS8 1709 aa25.19■■□□□ 1.62
SYNGR3-204ENST00000564642 SBF2Q86WG5 1849 aa25.19■■□□□ 1.62
SYNGR3-204ENST00000564642 EMILIN1Q9Y6C2 1016 aa25.18■■□□□ 1.62
SYNGR3-204ENST00000564642 TNS2Q63HR2 1409 aa25.18■■□□□ 1.62
SYNGR3-204ENST00000564642 INSRP06213 1382 aa25.18■■□□□ 1.62
SYNGR3-204ENST00000564642 KNSTRNQ9Y448 316 aa25.17■■□□□ 1.62
SYNGR3-204ENST00000564642 TNNT2P45379 298 aaPredicted RBP25.16■■□□□ 1.62
SYNGR3-204ENST00000564642 EZH2Q15910 746 aaKnown RBP25.16■■□□□ 1.62
SYNGR3-204ENST00000564642 NBPF6Q5VWK0 638 aa25.14■■□□□ 1.62
SYNGR3-204ENST00000564642 NBPF4Q96M43 638 aa25.14■■□□□ 1.62
SYNGR3-204ENST00000564642 CAMKK2Q96RR4 588 aa25.14■■□□□ 1.62
SYNGR3-204ENST00000564642 NSD2O96028 1365 aa25.14■■□□□ 1.61
SYNGR3-204ENST00000564642 BCL9O00512 1426 aa25.13■■□□□ 1.61
SYNGR3-204ENST00000564642 BCL11BQ9C0K0 894 aaPredicted RBP25.13■■□□□ 1.61
SYNGR3-204ENST00000564642 POLKQ9UBT6 870 aa25.12■■□□□ 1.61
SYNGR3-204ENST00000564642 PARD3Q8TEW0 1356 aa25.12■■□□□ 1.61
SYNGR3-204ENST00000564642 MORC1Q86VD1 984 aa25.11■■□□□ 1.61
SYNGR3-204ENST00000564642 USHBP1Q8N6Y0 703 aa25.11■■□□□ 1.61
SYNGR3-204ENST00000564642 WASHC2AQ641Q2 1341 aa25.11■■□□□ 1.61
SYNGR3-204ENST00000564642 DDX54Q8TDD1 881 aaKnown RBP25.1■■□□□ 1.61
SYNGR3-204ENST00000564642 RAPGEF4Q8WZA2 1011 aa25.09■■□□□ 1.61
SYNGR3-204ENST00000564642 KAT6BQ8WYB5 2073 aa25.08■■□□□ 1.61
SYNGR3-204ENST00000564642 ZCRB1Q8TBF4 217 aaKnown RBP25.07■■□□□ 1.6
SYNGR3-204ENST00000564642 PLSCR1O15162 318 aa25.06■■□□□ 1.6
SYNGR3-204ENST00000564642 TATP17735 454 aaPredicted RBP25.06■■□□□ 1.6
SYNGR3-204ENST00000564642 PTF1AQ7RTS3 328 aa25.06■■□□□ 1.6
SYNGR3-204ENST00000564642 ACSBG1Q96GR2 724 aa25.06■■□□□ 1.6
SYNGR3-204ENST00000564642 MEGF6O75095 1541 aa25.05■■□□□ 1.6
SYNGR3-204ENST00000564642 KCNQ2O43526 872 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms