RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 THUMPD2Q9BTF0 503 aaKnown RBP25.36■■□□□ 1.65
MSLN-205ENST00000563941 BRPF1P55201 1214 aaPredicted RBP25.35■■□□□ 1.65
MSLN-205ENST00000563941 DLG5Q8TDM6 1919 aa25.35■■□□□ 1.65
MSLN-205ENST00000563941 TBC1D32Q96NH3 1257 aa25.34■■□□□ 1.65
MSLN-205ENST00000563941 TMEM2Q9UHN6 1383 aa25.34■■□□□ 1.65
MSLN-205ENST00000563941 BECN1Q14457 450 aa25.34■■□□□ 1.65
MSLN-205ENST00000563941 SMC5Q8IY18 1101 aa25.34■■□□□ 1.65
MSLN-205ENST00000563941 RRS1Q15050 365 aaKnown RBP25.33■■□□□ 1.65
MSLN-205ENST00000563941 IFT57Q9NWB7 429 aa25.33■■□□□ 1.65
MSLN-205ENST00000563941 PRR36Q9H6K5 1346 aa25.33■■□□□ 1.65
MSLN-205ENST00000563941 GNAI1P63096 354 aa25.33■■□□□ 1.64
MSLN-205ENST00000563941 VAMP4O75379 141 aa25.31■■□□□ 1.64
MSLN-205ENST00000563941 ZNF692Q9BU19 519 aaPredicted RBP25.31■■□□□ 1.64
MSLN-205ENST00000563941 ROBO2Q9HCK4 1378 aa25.31■■□□□ 1.64
MSLN-205ENST00000563941 ZNF853P0CG23 659 aa25.3■■□□□ 1.64
MSLN-205ENST00000563941 ADAMTS13Q76LX8 1427 aa25.29■■□□□ 1.64
MSLN-205ENST00000563941 MRPL50Q8N5N7 158 aaKnown RBP25.29■■□□□ 1.64
MSLN-205ENST00000563941 TSPYL6Q8N831 410 aa25.29■■□□□ 1.64
MSLN-205ENST00000563941 MBIPQ9NS73 344 aa25.29■■□□□ 1.64
MSLN-205ENST00000563941 LMOD3Q0VAK6 560 aa25.28■■□□□ 1.64
MSLN-205ENST00000563941 NRKQ7Z2Y5 1582 aa25.28■■□□□ 1.64
MSLN-205ENST00000563941 PTCH1Q13635 1447 aa25.28■■□□□ 1.64
MSLN-205ENST00000563941 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.27■■□□□ 1.64
MSLN-205ENST00000563941 TOPAZ1Q8N9V7 1692 aa25.26■■□□□ 1.63
MSLN-205ENST00000563941 ARHGAP45Q92619 1136 aa25.26■■□□□ 1.63
MSLN-205ENST00000563941 FRAT2O75474 233 aaPredicted RBP25.25■■□□□ 1.63
MSLN-205ENST00000563941 PIK3R4Q99570 1358 aa25.25■■□□□ 1.63
MSLN-205ENST00000563941 CFAP44Q96MT7 982 aa25.25■■□□□ 1.63
MSLN-205ENST00000563941 ELL2O00472 640 aaPredicted RBP25.24■■□□□ 1.63
MSLN-205ENST00000563941 NUCB1Q02818 461 aa25.24■■□□□ 1.63
MSLN-205ENST00000563941 GSE1Q14687 1217 aa25.24■■□□□ 1.63
MSLN-205ENST00000563941 TWISTNBQ3B726 338 aaPredicted RBP25.23■■□□□ 1.63
MSLN-205ENST00000563941 ZBTB7BO15156 539 aaPredicted RBP25.22■■□□□ 1.63
MSLN-205ENST00000563941 PLEKHG1Q9ULL1 1385 aa25.22■■□□□ 1.63
MSLN-205ENST00000563941 TTC21BQ7Z4L5 1316 aa25.22■■□□□ 1.63
MSLN-205ENST00000563941 FAM83GA6ND36 823 aa25.22■■□□□ 1.63
MSLN-205ENST00000563941 CHMP4BQ9H444 224 aaKnown RBP25.22■■□□□ 1.63
MSLN-205ENST00000563941 ABCC4O15439 1325 aa25.2■■□□□ 1.62
MSLN-205ENST00000563941 ACEP12821 1306 aa25.2■■□□□ 1.62
MSLN-205ENST00000563941 C8orf58Q8NAV2 365 aa25.2■■□□□ 1.62
MSLN-205ENST00000563941 OVOS2A0A0J9YW53 1432 aa25.2■■□□□ 1.62
MSLN-205ENST00000563941 OVOS2Q6IE36 1432 aa25.2■■□□□ 1.62
MSLN-205ENST00000563941 LTKP29376 864 aa25.19■■□□□ 1.62
MSLN-205ENST00000563941 MFAP1P55081 439 aaKnown RBP25.19■■□□□ 1.62
MSLN-205ENST00000563941 TBC1D2Q9BYX2 928 aa25.19■■□□□ 1.62
MSLN-205ENST00000563941 EIF4A2Q14240 407 aaKnown RBP25.19■■□□□ 1.62
MSLN-205ENST00000563941 SLKQ9H2G2 1235 aaPredicted RBP25.19■■□□□ 1.62
MSLN-205ENST00000563941 DCTN1Q14203 1278 aa25.18■■□□□ 1.62
MSLN-205ENST00000563941 CHD1LQ86WJ1 897 aa25.18■■□□□ 1.62
MSLN-205ENST00000563941 C22orf23Q9BZE7 217 aa25.18■■□□□ 1.62
MSLN-205ENST00000563941 LNPKQ9C0E8 428 aa25.18■■□□□ 1.62
MSLN-205ENST00000563941 NALCNQ8IZF0 1738 aa25.18■■□□□ 1.62
MSLN-205ENST00000563941 PLEKHG3A1L390 1219 aa25.18■■□□□ 1.62
MSLN-205ENST00000563941 USP6P35125 1406 aa25.17■■□□□ 1.62
MSLN-205ENST00000563941 AEBP1Q8IUX7 1158 aa25.17■■□□□ 1.62
MSLN-205ENST00000563941 NUTM2FA1L443 756 aa25.16■■□□□ 1.62
MSLN-205ENST00000563941 C1orf115Q9H7X2 142 aa25.16■■□□□ 1.62
MSLN-205ENST00000563941 SULT6B1Q6IMI4 303 aa25.16■■□□□ 1.62
MSLN-205ENST00000563941 PEAK1Q9H792 1746 aa25.15■■□□□ 1.62
MSLN-205ENST00000563941 ANTXR1Q9H6X2 564 aa25.15■■□□□ 1.62
MSLN-205ENST00000563941 GCC1Q96CN9 775 aa25.15■■□□□ 1.62
MSLN-205ENST00000563941 PTPRUQ92729 1446 aa25.15■■□□□ 1.62
MSLN-205ENST00000563941 API5Q9BZZ5 524 aaKnown RBP25.14■■□□□ 1.62
MSLN-205ENST00000563941 RGPD1P0DJD0 1748 aa25.12■■□□□ 1.61
MSLN-205ENST00000563941 SLC26A8Q96RN1 970 aa25.12■■□□□ 1.61
MSLN-205ENST00000563941 ANKRD45Q5TZF3 282 aa25.11■■□□□ 1.61
MSLN-205ENST00000563941 USP31Q70CQ4 1352 aa25.11■■□□□ 1.61
MSLN-205ENST00000563941 CEBPAP49715 358 aaPredicted RBP25.1■■□□□ 1.61
MSLN-205ENST00000563941 SIRT2Q8IXJ6 389 aa25.1■■□□□ 1.61
MSLN-205ENST00000563941 HSP90AB2PQ58FF8 381 aa25.09■■□□□ 1.61
MSLN-205ENST00000563941 SSH2Q76I76 1423 aa25.09■■□□□ 1.61
MSLN-205ENST00000563941 EID1Q9Y6B2 187 aa25.09■■□□□ 1.61
MSLN-205ENST00000563941 TRHP20396 242 aaPredicted RBP25.08■■□□□ 1.61
MSLN-205ENST00000563941 BMP2KLQ5H9B9 411 aa25.08■■□□□ 1.61
MSLN-205ENST00000563941 KIF24Q5T7B8 1368 aa25.08■■□□□ 1.6
MSLN-205ENST00000563941 CHL1O00533 1208 aa25.06■■□□□ 1.6
MSLN-205ENST00000563941 MCM10Q7L590 875 aa25.06■■□□□ 1.6
MSLN-205ENST00000563941 FMN2Q9NZ56 1722 aa25.06■■□□□ 1.6
MSLN-205ENST00000563941 SLIT1O75093 1534 aa25.06■■□□□ 1.6
MSLN-205ENST00000563941 AMOTL2Q9Y2J4 779 aa25.06■■□□□ 1.6
MSLN-205ENST00000563941 SOX12O15370 315 aa25.05■■□□□ 1.6
MSLN-205ENST00000563941 HAP1P54257 671 aaPredicted RBP25.04■■□□□ 1.6
MSLN-205ENST00000563941 ARHGAP23Q9P227 1491 aa25.04■■□□□ 1.6
MSLN-205ENST00000563941 TTC21AQ8NDW8 1320 aa25.04■■□□□ 1.6
MSLN-205ENST00000563941 KRT24Q2M2I5 525 aa25.04■■□□□ 1.6
MSLN-205ENST00000563941 RBM25P49756 843 aaKnown RBP25.03■■□□□ 1.6
MSLN-205ENST00000563941 KIAA0232Q92628 1395 aa25.03■■□□□ 1.6
MSLN-205ENST00000563941 SPRYD3Q8NCJ5 442 aa25.03■■□□□ 1.6
MSLN-205ENST00000563941 ARHGEF10O15013 1369 aa25.03■■□□□ 1.6
MSLN-205ENST00000563941 MAP3K19Q56UN5 1328 aa25.02■■□□□ 1.6
MSLN-205ENST00000563941 RGPD8O14715 1765 aaPredicted RBP25.01■■□□□ 1.59
MSLN-205ENST00000563941 DIP2AQ14689 1571 aa25.01■■□□□ 1.59
MSLN-205ENST00000563941 INTS3Q68E01 1043 aaKnown RBP25.01■■□□□ 1.59
MSLN-205ENST00000563941 RGS12O14924 1447 aa25.01■■□□□ 1.59
MSLN-205ENST00000563941 TBX22Q9Y458 520 aa25.01■■□□□ 1.59
MSLN-205ENST00000563941 CRB1P82279 1406 aa25■■□□□ 1.59
MSLN-205ENST00000563941 HSCBQ8IWL3 235 aa24.99■■□□□ 1.59
MSLN-205ENST00000563941 IL27Q8NEV9 243 aa24.99■■□□□ 1.59
MSLN-205ENST00000563941 RIMS1Q86UR5 1692 aaKnown RBP24.99■■□□□ 1.59
MSLN-205ENST00000563941 SBNO1A3KN83 1393 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms