RNA–Protein interactions for RNA: ENST00000563670.1

HERC2-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 5

Gene HERC2, Length 618 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-203ENST00000563670 LMOD2Q6P5Q4 547 aa12.13□□□□□ -0.47
HERC2-203ENST00000563670 FBXO3Q9UK99 471 aa12.13□□□□□ -0.47
HERC2-203ENST00000563670 ZBTB12Q9Y330 459 aaPredicted RBP12.13□□□□□ -0.47
HERC2-203ENST00000563670 PEAK1Q9H792 1746 aa12.13□□□□□ -0.47
HERC2-203ENST00000563670 NRXN1Q9ULB1 1477 aa12.13□□□□□ -0.47
HERC2-203ENST00000563670 FMN2Q9NZ56 1722 aa12.12□□□□□ -0.47
HERC2-203ENST00000563670 TOMM70O94826 608 aa12.12□□□□□ -0.47
HERC2-203ENST00000563670 NLGN2Q8NFZ4 835 aa12.12□□□□□ -0.47
HERC2-203ENST00000563670 L3MBTL2Q969R5 705 aa12.12□□□□□ -0.47
HERC2-203ENST00000563670 PHF8Q9UPP1 1060 aa12.12□□□□□ -0.47
HERC2-203ENST00000563670 PRDM11Q9NQV5 511 aa12.1□□□□□ -0.47
HERC2-203ENST00000563670 PIK3C2GO75747 1445 aa12.1□□□□□ -0.47
HERC2-203ENST00000563670 TXNRD1Q16881 649 aa12.09□□□□□ -0.47
HERC2-203ENST00000563670 C14orf93Q9H972 538 aaKnown RBP12.09□□□□□ -0.47
HERC2-203ENST00000563670 PARP4Q9UKK3 1724 aaKnown RBP12.08□□□□□ -0.47
HERC2-203ENST00000563670 KIAA1210Q9ULL0 1709 aa12.08□□□□□ -0.47
HERC2-203ENST00000563670 FAM161AQ3B820 660 aa12.08□□□□□ -0.48
HERC2-203ENST00000563670 CFAP70Q5T0N1 1121 aa12.08□□□□□ -0.48
HERC2-203ENST00000563670 TCP11L2Q8N4U5 519 aa12.08□□□□□ -0.48
HERC2-203ENST00000563670 TIMELESSQ9UNS1 1208 aa12.08□□□□□ -0.48
HERC2-203ENST00000563670 BCL9O00512 1426 aa12.07□□□□□ -0.48
HERC2-203ENST00000563670 CACNB1Q02641 598 aaPredicted RBP12.07□□□□□ -0.48
HERC2-203ENST00000563670 COL24A1Q17RW2 1714 aa12.07□□□□□ -0.48
HERC2-203ENST00000563670 SSH2Q76I76 1423 aa12.07□□□□□ -0.48
HERC2-203ENST00000563670 KLHL34Q8N239 644 aa12.07□□□□□ -0.48
HERC2-203ENST00000563670 USP35Q9P2H5 1018 aa12.07□□□□□ -0.48
HERC2-203ENST00000563670 THRAP3Q9Y2W1 955 aaKnown RBP12.07□□□□□ -0.48
HERC2-203ENST00000563670 ATP7BP35670 1465 aa12.07□□□□□ -0.48
HERC2-203ENST00000563670 ALS2Q96Q42 1657 aa12.06□□□□□ -0.48
HERC2-203ENST00000563670 CRYBG1Q9Y4K1 1723 aa12.06□□□□□ -0.48
HERC2-203ENST00000563670 POLD1P28340 1107 aa12.06□□□□□ -0.48
HERC2-203ENST00000563670 PTF1AQ7RTS3 328 aa12.06□□□□□ -0.48
HERC2-203ENST00000563670 SLC16A10Q8TF71 515 aa12.06□□□□□ -0.48
HERC2-203ENST00000563670 STRN4Q9NRL3 753 aa12.06□□□□□ -0.48
HERC2-203ENST00000563670 SBF2Q86WG5 1849 aa12.06□□□□□ -0.48
HERC2-203ENST00000563670 TRPM3Q9HCF6 1732 aaPredicted RBP12.06□□□□□ -0.48
HERC2-203ENST00000563670 HSPA1AP0DMV8 641 aaKnown RBP12.05□□□□□ -0.48
HERC2-203ENST00000563670 HSPA1BP0DMV9 641 aaKnown RBP12.05□□□□□ -0.48
HERC2-203ENST00000563670 TMEM132EQ6IEE7 984 aa12.05□□□□□ -0.48
HERC2-203ENST00000563670 STK26Q9P289 416 aa12.05□□□□□ -0.48
HERC2-203ENST00000563670 KIAA0232Q92628 1395 aa12.05□□□□□ -0.48
HERC2-203ENST00000563670 PAPPAQ13219 1627 aa12.04□□□□□ -0.48
HERC2-203ENST00000563670 KNDC1Q76NI1 1749 aa12.04□□□□□ -0.48
HERC2-203ENST00000563670 HTRA3P83110 453 aa12.04□□□□□ -0.48
HERC2-203ENST00000563670 TULP4Q9NRJ4 1543 aa12.04□□□□□ -0.48
HERC2-203ENST00000563670 WAPLQ7Z5K2 1190 aa12.03□□□□□ -0.48
HERC2-203ENST00000563670 TRPM1Q7Z4N2 1603 aa12.03□□□□□ -0.48
HERC2-203ENST00000563670 ARHGEF28Q8N1W1 1705 aaKnown RBP12.03□□□□□ -0.48
HERC2-203ENST00000563670 YTHDC2Q9H6S0 1430 aaKnown RBP12.03□□□□□ -0.48
HERC2-203ENST00000563670 RBM46Q8TBY0 533 aaKnown RBP12.02□□□□□ -0.49
HERC2-203ENST00000563670 TOPAZ1Q8N9V7 1692 aa12.01□□□□□ -0.49
HERC2-203ENST00000563670 EVA1CP58658 441 aa12□□□□□ -0.49
HERC2-203ENST00000563670 FSTL1Q12841 308 aa12□□□□□ -0.49
HERC2-203ENST00000563670 CHRNA2Q15822 529 aa12□□□□□ -0.49
HERC2-203ENST00000563670 LARP1Q6PKG0 1096 aaKnown RBP12□□□□□ -0.49
HERC2-203ENST00000563670 POGKQ9P215 609 aa12□□□□□ -0.49
HERC2-203ENST00000563670 TRAK1Q9UPV9 953 aa12□□□□□ -0.49
HERC2-203ENST00000563670 ROCK2O75116 1388 aaKnown RBP12□□□□□ -0.49
HERC2-203ENST00000563670 ABCC11Q96J66 1382 aa12□□□□□ -0.49
HERC2-203ENST00000563670 PLEKHH1Q9ULM0 1364 aa12□□□□□ -0.49
HERC2-203ENST00000563670 ABCB7O75027 752 aa11.99□□□□□ -0.49
HERC2-203ENST00000563670 NBPF1Q3BBV0 1214 aa11.99□□□□□ -0.49
HERC2-203ENST00000563670 ADGRB1O14514 1584 aa11.99□□□□□ -0.49
HERC2-203ENST00000563670 LRRC37A3O60309 1634 aa11.98□□□□□ -0.49
HERC2-203ENST00000563670 SIRT1Q96EB6 747 aa11.98□□□□□ -0.49
HERC2-203ENST00000563670 RGPD8O14715 1765 aaPredicted RBP11.97□□□□□ -0.49
HERC2-203ENST00000563670 ANKARQ7Z5J8 1434 aa11.97□□□□□ -0.49
HERC2-203ENST00000563670 GPRASP1Q5JY77 1395 aa11.97□□□□□ -0.49
HERC2-203ENST00000563670 PMFBP1Q8TBY8 1022 aa11.97□□□□□ -0.49
HERC2-203ENST00000563670 CARD11Q9BXL7 1154 aa11.97□□□□□ -0.49
HERC2-203ENST00000563670 PHRF1Q9P1Y6 1649 aaKnown RBP11.97□□□□□ -0.49
HERC2-203ENST00000563670 MLLT1Q03111 559 aaPredicted RBP11.96□□□□□ -0.49
HERC2-203ENST00000563670 ZNF827Q17R98 1081 aa11.96□□□□□ -0.49
HERC2-203ENST00000563670 PRAM1Q96QH2 718 aa11.96□□□□□ -0.49
HERC2-203ENST00000563670 EIF3AQ14152 1382 aaKnown RBP11.95□□□□□ -0.5
HERC2-203ENST00000563670 QSER1Q2KHR3 1735 aa11.95□□□□□ -0.5
HERC2-203ENST00000563670 RGS19P49795 217 aa11.95□□□□□ -0.5
HERC2-203ENST00000563670 SAFB2Q14151 953 aaKnown RBP eCLIP11.95□□□□□ -0.5
HERC2-203ENST00000563670 DDB1Q16531 1140 aa11.95□□□□□ -0.5
HERC2-203ENST00000563670 LMO7Q8WWI1 1683 aa11.94□□□□□ -0.5
HERC2-203ENST00000563670 BRD4O60885 1362 aaPredicted RBP11.93□□□□□ -0.5
HERC2-203ENST00000563670 USP19O94966 1318 aa11.93□□□□□ -0.5
HERC2-203ENST00000563670 MARCH10Q8NA82 808 aaPredicted RBP11.93□□□□□ -0.5
HERC2-203ENST00000563670 PRDM10Q9NQV6 1147 aa11.93□□□□□ -0.5
HERC2-203ENST00000563670 CD2APQ9Y5K6 639 aa11.93□□□□□ -0.5
HERC2-203ENST00000563670 QRICH2Q9H0J4 1663 aa11.93□□□□□ -0.5
HERC2-203ENST00000563670 CENPJQ9HC77 1338 aaPredicted RBP11.92□□□□□ -0.5
HERC2-203ENST00000563670 ZC3H6P61129 1189 aaKnown RBP11.92□□□□□ -0.5
HERC2-203ENST00000563670 AKT1S1Q96B36 256 aa11.92□□□□□ -0.5
HERC2-203ENST00000563670 CRB1P82279 1406 aa11.92□□□□□ -0.5
HERC2-203ENST00000563670 CPDO75976 1380 aa11.92□□□□□ -0.5
HERC2-203ENST00000563670 PNPLA7Q6ZV29 1317 aa11.91□□□□□ -0.5
HERC2-203ENST00000563670 MINK1Q8N4C8 1332 aaPredicted RBP11.91□□□□□ -0.5
HERC2-203ENST00000563670 CICQ96RK0 1608 aaPredicted RBP11.91□□□□□ -0.5
HERC2-203ENST00000563670 DSG3P32926 999 aa11.91□□□□□ -0.5
HERC2-203ENST00000563670 NMRK2Q9NPI5 230 aa11.91□□□□□ -0.5
HERC2-203ENST00000563670 COL5A2P05997 1499 aaPredicted RBP11.9□□□□□ -0.5
HERC2-203ENST00000563670 ZEB1P37275 1124 aaPredicted RBP11.89□□□□□ -0.51
HERC2-203ENST00000563670 C16orf71Q8IYS4 520 aaPredicted RBP11.89□□□□□ -0.51
HERC2-203ENST00000563670 HIRIP3Q9BW71 556 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms